RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 EIF4EBP3O60516 100 aaPredicted RBP11.48□□□□□ -0.57
TOP3A-219ENST00000584887 ZNF73O43830 326 aaPredicted RBP11.47□□□□□ -0.57
TOP3A-219ENST00000584887 ADAMTSL4-AS1Q5T5F5 129 aa11.47□□□□□ -0.57
TOP3A-219ENST00000584887 Q8N377 158 aa11.46□□□□□ -0.57
TOP3A-219ENST00000584887 SLC25A20O43772 301 aa11.45□□□□□ -0.58
TOP3A-219ENST00000584887 COLCA2A8K830 154 aa11.44□□□□□ -0.58
TOP3A-219ENST00000584887 E9PLD3 99 aa11.44□□□□□ -0.58
TOP3A-219ENST00000584887 RPS29P62273 56 aaKnown RBP11.44□□□□□ -0.58
TOP3A-219ENST00000584887 ASB16-AS1Q495Z4 193 aa11.44□□□□□ -0.58
TOP3A-219ENST00000584887 ST20-AS1Q8NBB2 130 aa11.44□□□□□ -0.58
TOP3A-219ENST00000584887 SLC7A5P1Q8MH63 180 aa11.43□□□□□ -0.58
TOP3A-219ENST00000584887 HINT1P49773 126 aaPredicted RBP11.42□□□□□ -0.58
TOP3A-219ENST00000584887 OR13C6PQ8NH95 151 aa11.42□□□□□ -0.58
TOP3A-219ENST00000584887 SEC61BP60468 96 aaKnown RBP11.41□□□□□ -0.58
TOP3A-219ENST00000584887 CBY1Q9Y3M2 126 aa11.4□□□□□ -0.58
TOP3A-219ENST00000584887 SYS1-DBNDD2H3BUS1 97 aa11.39□□□□□ -0.59
TOP3A-219ENST00000584887 LINC00308Q8TCZ7 52 aa11.38□□□□□ -0.59
TOP3A-219ENST00000584887 SPANXCQ9NY87 97 aa11.37□□□□□ -0.59
TOP3A-219ENST00000584887 LITAFQ99732 161 aa11.36□□□□□ -0.59
TOP3A-219ENST00000584887 KRTAP4-1Q9BYQ7 146 aa11.36□□□□□ -0.59
TOP3A-219ENST00000584887 ZNF815PA8K554 130 aa11.35□□□□□ -0.59
TOP3A-219ENST00000584887 C5orf52A6NGY3 159 aa11.33□□□□□ -0.6
TOP3A-219ENST00000584887 TIMM17BO60830 172 aa11.33□□□□□ -0.6
TOP3A-219ENST00000584887 LINC01547P58512 204 aaPredicted RBP11.33□□□□□ -0.6
TOP3A-219ENST00000584887 HRCT1Q6UXD1 115 aa11.33□□□□□ -0.6
TOP3A-219ENST00000584887 HIST1H2BKO60814 126 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 HIST1H2BJP06899 126 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 HIST1H2BOP23527 126 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 HIST1H2BBP33778 126 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 HIST1H2BDP58876 126 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 HIST1H2BCP62807 126 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 HIST2H2BEQ16778 126 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.32□□□□□ -0.6
TOP3A-219ENST00000584887 LINC01545Q5VT33 79 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 HIST1H2BHQ93079 126 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 HIST1H2BNQ99877 126 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 HIST1H2BMQ99879 126 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 SPANXDQ9BXN6 97 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 TTTY13Q9BZ97 58 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 DHRS4-AS1Q9P1J3 65 aa11.32□□□□□ -0.6
TOP3A-219ENST00000584887 SLC25A34Q6PIV7 304 aa11.31□□□□□ -0.6
TOP3A-219ENST00000584887 XP32Q5T750 250 aa11.3□□□□□ -0.6
TOP3A-219ENST00000584887 PET117Q6UWS5 81 aa11.3□□□□□ -0.6
TOP3A-219ENST00000584887 COX7BP24311 80 aa11.29□□□□□ -0.6
TOP3A-219ENST00000584887 LAMTOR3Q9UHA4 124 aa11.29□□□□□ -0.6
TOP3A-219ENST00000584887 SPRR1BP22528 89 aa11.28□□□□□ -0.6
TOP3A-219ENST00000584887 C6orf99Q4VX62 202 aa11.28□□□□□ -0.6
TOP3A-219ENST00000584887 LIMD2Q9BT23 127 aa11.28□□□□□ -0.6
TOP3A-219ENST00000584887 S100A1P23297 94 aa11.26□□□□□ -0.61
TOP3A-219ENST00000584887 LINC00518Q8N0U6 118 aa11.26□□□□□ -0.61
TOP3A-219ENST00000584887 DEFB105AQ8NG35 78 aa11.26□□□□□ -0.61
TOP3A-219ENST00000584887 ELOF1P60002 83 aaKnown RBP11.25□□□□□ -0.61
TOP3A-219ENST00000584887 TAL2Q16559 108 aa11.25□□□□□ -0.61
TOP3A-219ENST00000584887 Q1RN00 199 aa11.25□□□□□ -0.61
TOP3A-219ENST00000584887 C3orf79P0CE67 100 aa11.24□□□□□ -0.61
TOP3A-219ENST00000584887 KRTDAPP60985 99 aa11.24□□□□□ -0.61
TOP3A-219ENST00000584887 SCGB1D4Q6XE38 83 aa11.24□□□□□ -0.61
TOP3A-219ENST00000584887 KRTAP9-6A0A140TA67 174 aa11.21□□□□□ -0.61
TOP3A-219ENST00000584887 C9orf92A6NGG3 77 aa11.21□□□□□ -0.61
TOP3A-219ENST00000584887 TEX49A0A1B0GTD5 131 aa11.18□□□□□ -0.62
TOP3A-219ENST00000584887 PRO1933Q9H354 126 aa11.18□□□□□ -0.62
TOP3A-219ENST00000584887 C20orf202A1L168 122 aa11.17□□□□□ -0.62
TOP3A-219ENST00000584887 A6NDN8 102 aa11.17□□□□□ -0.62
TOP3A-219ENST00000584887 H7C2G1 150 aa11.17□□□□□ -0.62
TOP3A-219ENST00000584887 COPS9Q8WXC6 57 aa11.17□□□□□ -0.62
TOP3A-219ENST00000584887 ANKRD39Q53RE8 183 aa11.16□□□□□ -0.62
TOP3A-219ENST00000584887 PCOTHQ58A44 107 aa11.16□□□□□ -0.62
TOP3A-219ENST00000584887 ATOH7Q8N100 152 aa11.15□□□□□ -0.62
TOP3A-219ENST00000584887 TRBV7-6A0A0J9YX20 115 aa11.14□□□□□ -0.63
TOP3A-219ENST00000584887 A0A1B0GWB2 263 aa11.14□□□□□ -0.63
TOP3A-219ENST00000584887 CD164Q04900 197 aa11.14□□□□□ -0.63
TOP3A-219ENST00000584887 IFITM1P13164 125 aa11.13□□□□□ -0.63
TOP3A-219ENST00000584887 IGLV8-61A0A075B6I0 122 aa11.12□□□□□ -0.63
TOP3A-219ENST00000584887 AKR1D1P51857 326 aa11.12□□□□□ -0.63
TOP3A-219ENST00000584887 A0A0G2JQZ4 141 aa11.11□□□□□ -0.63
TOP3A-219ENST00000584887 COA6Q5JTJ3 125 aaKnown RBP11.11□□□□□ -0.63
TOP3A-219ENST00000584887 MUSTN1Q8IVN3 82 aa11.11□□□□□ -0.63
TOP3A-219ENST00000584887 SMIM29Q86T20 159 aa11.1□□□□□ -0.63
TOP3A-219ENST00000584887 PCP2Q8IVA1 136 aa11.1□□□□□ -0.63
TOP3A-219ENST00000584887 Q6ZVH6 145 aa11.08□□□□□ -0.64
TOP3A-219ENST00000584887 IGLV5-48A0A075B6I7 105 aa11.07□□□□□ -0.64
TOP3A-219ENST00000584887 LCE2CQ5TA81 110 aa11.06□□□□□ -0.64
TOP3A-219ENST00000584887 TRAV13-2A0A0B4J235 113 aa11.05□□□□□ -0.64
TOP3A-219ENST00000584887 A4D1N5 150 aa11.05□□□□□ -0.64
TOP3A-219ENST00000584887 C1orf195Q5TG92 126 aa11.05□□□□□ -0.64
TOP3A-219ENST00000584887 SMIM11BQ8TCY0 68 aa11.05□□□□□ -0.64
TOP3A-219ENST00000584887 NHP2Q9NX24 153 aaKnown RBP11.05□□□□□ -0.64
TOP3A-219ENST00000584887 Q5XG85 94 aa11.03□□□□□ -0.64
TOP3A-219ENST00000584887 KRTAP19-2Q3LHN2 52 aa11.01□□□□□ -0.65
TOP3A-219ENST00000584887 LCE2DQ5TA82 110 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-219ENST00000584887 F8WEM9 126 aa11□□□□□ -0.65
TOP3A-219ENST00000584887 MT1HP80294 61 aa10.98□□□□□ -0.65
TOP3A-219ENST00000584887 TCL1BO95988 128 aa10.97□□□□□ -0.65
TOP3A-219ENST00000584887 VAMP3Q15836 100 aa10.97□□□□□ -0.65
TOP3A-219ENST00000584887 SNRPEP62304 92 aaKnown RBP10.96□□□□□ -0.65
TOP3A-219ENST00000584887 RPL37P61927 97 aaKnown RBP10.94□□□□□ -0.66
TOP3A-219ENST00000584887 LINC00575Q6W349 94 aa10.93□□□□□ -0.66
TOP3A-219ENST00000584887 HSBP1L1C9JCN9 74 aa10.92□□□□□ -0.66
TOP3A-219ENST00000584887 Q6ZQY7 126 aa10.92□□□□□ -0.66
TOP3A-219ENST00000584887 CFC1BP0CG36 223 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 262.7 ms