RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 LINC00167Q96N53 147 aa8.85□□□□□ -0.99
UBBP4-202ENST00000584755 TRBV7-6A0A0J9YX20 115 aa8.84□□□□□ -0.99
UBBP4-202ENST00000584755 M0QXV9 152 aa8.84□□□□□ -0.99
UBBP4-202ENST00000584755 ZNF73O43830 326 aaPredicted RBP8.84□□□□□ -0.99
UBBP4-202ENST00000584755 KRTAP10-2P60368 255 aa8.84□□□□□ -0.99
UBBP4-202ENST00000584755 LCE2DQ5TA82 110 aaPredicted RBP8.84□□□□□ -0.99
UBBP4-202ENST00000584755 PRO0461Q9UI25 63 aa8.84□□□□□ -0.99
UBBP4-202ENST00000584755 TRACP01848 142 aa8.83□□□□□ -1
UBBP4-202ENST00000584755 DIRC1Q969H9 104 aa8.83□□□□□ -1
UBBP4-202ENST00000584755 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.83□□□□□ -1
UBBP4-202ENST00000584755 RYR2Q92736 4967 aa8.83□□□□□ -1
UBBP4-202ENST00000584755 PRYO14603 147 aa8.83□□□□□ -1
UBBP4-202ENST00000584755 KMT2CQ8NEZ4 4911 aaKnown RBP8.82□□□□□ -1
UBBP4-202ENST00000584755 DNAH8Q96JB1 4490 aa8.82□□□□□ -1
UBBP4-202ENST00000584755 A0A1B0GV72 72 aa8.82□□□□□ -1
UBBP4-202ENST00000584755 A0A1B0GX51 115 aa8.82□□□□□ -1
UBBP4-202ENST00000584755 F8W1H4 67 aa8.82□□□□□ -1
UBBP4-202ENST00000584755 SPRR1AP35321 89 aa8.82□□□□□ -1
UBBP4-202ENST00000584755 LINC00336Q6ZUF6 198 aa8.82□□□□□ -1
UBBP4-202ENST00000584755 A0A087WYN8 130 aa8.81□□□□□ -1
UBBP4-202ENST00000584755 ELOF1P60002 83 aaKnown RBP8.81□□□□□ -1
UBBP4-202ENST00000584755 LINC01600Q96MT4 127 aa8.81□□□□□ -1
UBBP4-202ENST00000584755 RPL37AP8A6NKH3 93 aa8.8□□□□□ -1
UBBP4-202ENST00000584755 KRTAP4-16G5E9R7 235 aaPredicted RBP8.8□□□□□ -1
UBBP4-202ENST00000584755 MTURNQ8N3F0 131 aa8.8□□□□□ -1
UBBP4-202ENST00000584755 C9JAW5 83 aa8.79□□□□□ -1
UBBP4-202ENST00000584755 SMCPP49901 116 aaPredicted RBP8.79□□□□□ -1
UBBP4-202ENST00000584755 LINC00575Q6W349 94 aa8.79□□□□□ -1
UBBP4-202ENST00000584755 COX7BP24311 80 aa8.78□□□□□ -1
UBBP4-202ENST00000584755 PHF5AQ7RTV0 110 aaKnown RBP8.78□□□□□ -1
UBBP4-202ENST00000584755 PLAC8Q9NZF1 115 aa8.78□□□□□ -1
UBBP4-202ENST00000584755 LINC00528Q8N1L1 170 aa8.77□□□□□ -1
UBBP4-202ENST00000584755 SLC25A20O43772 301 aa8.77□□□□□ -1.01
UBBP4-202ENST00000584755 H3BT86 120 aa8.75□□□□□ -1.01
UBBP4-202ENST00000584755 REG3GQ6UW15 175 aa8.75□□□□□ -1.01
UBBP4-202ENST00000584755 Q6ZSA8 131 aa8.75□□□□□ -1.01
UBBP4-202ENST00000584755 DPH3Q96FX2 82 aa8.75□□□□□ -1.01
UBBP4-202ENST00000584755 A0A1B0GVY2 172 aa8.74□□□□□ -1.01
UBBP4-202ENST00000584755 hADV29S1A0JD25 119 aa8.74□□□□□ -1.01
UBBP4-202ENST00000584755 B5MCH6 92 aa8.74□□□□□ -1.01
UBBP4-202ENST00000584755 DNAL4O96015 105 aa8.74□□□□□ -1.01
UBBP4-202ENST00000584755 KRTAP11-1Q8IUC1 163 aa8.74□□□□□ -1.01
UBBP4-202ENST00000584755 ANKRD29Q8N6D5 301 aa8.74□□□□□ -1.01
UBBP4-202ENST00000584755 SNCGO76070 127 aa8.73□□□□□ -1.01
UBBP4-202ENST00000584755 INAFM2P0DMQ5 153 aa8.73□□□□□ -1.01
UBBP4-202ENST00000584755 KRTAP10-1P60331 282 aa8.73□□□□□ -1.01
UBBP4-202ENST00000584755 Q6ZRX8 168 aa8.73□□□□□ -1.01
UBBP4-202ENST00000584755 ETDCA0A1B0GVM5 59 aa8.72□□□□□ -1.01
UBBP4-202ENST00000584755 UBE2BP63146 152 aa8.72□□□□□ -1.01
UBBP4-202ENST00000584755 FAM30AQ9NZY2 134 aa8.71□□□□□ -1.01
UBBP4-202ENST00000584755 BAALC-AS2P0C853 105 aa8.7□□□□□ -1.02
UBBP4-202ENST00000584755 Q9BRP9 147 aa8.7□□□□□ -1.02
UBBP4-202ENST00000584755 ORMDL1Q9P0S3 153 aa8.7□□□□□ -1.02
UBBP4-202ENST00000584755 DHRS4-AS1Q9P1J3 65 aa8.7□□□□□ -1.02
UBBP4-202ENST00000584755 ETDBQ3ZM63 59 aa8.69□□□□□ -1.02
UBBP4-202ENST00000584755 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.69□□□□□ -1.02
UBBP4-202ENST00000584755 TEN1Q86WV5 123 aa8.69□□□□□ -1.02
UBBP4-202ENST00000584755 H0Y9J4 135 aa8.68□□□□□ -1.02
UBBP4-202ENST00000584755 Q6ZQY7 126 aa8.67□□□□□ -1.02
UBBP4-202ENST00000584755 CIRBP-AS1Q8TBR5 109 aa8.67□□□□□ -1.02
UBBP4-202ENST00000584755 LRP1BQ9NZR2 4599 aa8.67□□□□□ -1.02
UBBP4-202ENST00000584755 PKHD1P08F94 4074 aa8.67□□□□□ -1.02
UBBP4-202ENST00000584755 H3BQ85 93 aa8.66□□□□□ -1.02
UBBP4-202ENST00000584755 DYNC1H1Q14204 4646 aaKnown RBP8.66□□□□□ -1.02
UBBP4-202ENST00000584755 TMEM256-PLSCR3K7ERE1 68 aa8.65□□□□□ -1.02
UBBP4-202ENST00000584755 BCE1O60756 84 aa8.65□□□□□ -1.02
UBBP4-202ENST00000584755 SCXQ7RTU7 201 aa8.65□□□□□ -1.02
UBBP4-202ENST00000584755 FAM19A1Q7Z5A9 133 aa8.65□□□□□ -1.02
UBBP4-202ENST00000584755 SMCR5Q8TEV8 140 aa8.65□□□□□ -1.02
UBBP4-202ENST00000584755 SIGMAR1Q99720 223 aa8.65□□□□□ -1.02
UBBP4-202ENST00000584755 J3QR89 54 aa8.64□□□□□ -1.03
UBBP4-202ENST00000584755 KRTAP13-1Q8IUC0 172 aa8.64□□□□□ -1.03
UBBP4-202ENST00000584755 RYR3Q15413 4870 aa8.64□□□□□ -1.03
UBBP4-202ENST00000584755 GHRHP01286 108 aa8.64□□□□□ -1.03
UBBP4-202ENST00000584755 PRLHP81277 87 aa8.63□□□□□ -1.03
UBBP4-202ENST00000584755 PSORS1C2Q9UIG4 136 aa8.63□□□□□ -1.03
UBBP4-202ENST00000584755 ERC2-IT1O76042 136 aa8.62□□□□□ -1.03
UBBP4-202ENST00000584755 PPDPFLQ8WWR9 84 aa8.62□□□□□ -1.03
UBBP4-202ENST00000584755 IGLV5-48A0A075B6I7 105 aa8.61□□□□□ -1.03
UBBP4-202ENST00000584755 LINC01547P58512 204 aaPredicted RBP8.61□□□□□ -1.03
UBBP4-202ENST00000584755 OBSCN-AS1Q96MR7 158 aa8.61□□□□□ -1.03
UBBP4-202ENST00000584755 TEX49A0A1B0GTD5 131 aa8.6□□□□□ -1.03
UBBP4-202ENST00000584755 UBE2AP49459 152 aa8.59□□□□□ -1.03
UBBP4-202ENST00000584755 Q8N377 158 aa8.58□□□□□ -1.04
UBBP4-202ENST00000584755 ST20-AS1Q8NBB2 130 aa8.57□□□□□ -1.04
UBBP4-202ENST00000584755 HIGD2AQ9BW72 106 aa8.57□□□□□ -1.04
UBBP4-202ENST00000584755 C1orf137Q5JT78 98 aa8.57□□□□□ -1.04
UBBP4-202ENST00000584755 JMJD7-PLA2G4BH0Y9G9 81 aa8.56□□□□□ -1.04
UBBP4-202ENST00000584755 HAMPP81172 84 aa8.55□□□□□ -1.04
UBBP4-202ENST00000584755 APOBP04114 4563 aaKnown RBP8.55□□□□□ -1.04
UBBP4-202ENST00000584755 ZNF861PO60384 105 aa8.54□□□□□ -1.04
UBBP4-202ENST00000584755 IGLV7-43P04211 117 aa8.53□□□□□ -1.04
UBBP4-202ENST00000584755 SPRR1BP22528 89 aa8.53□□□□□ -1.04
UBBP4-202ENST00000584755 XGP55808 180 aa8.53□□□□□ -1.04
UBBP4-202ENST00000584755 NDUFV3P56181 108 aaKnown RBP8.53□□□□□ -1.04
UBBP4-202ENST00000584755 DEFB105AQ8NG35 78 aa8.53□□□□□ -1.04
UBBP4-202ENST00000584755 LAMTOR3Q9UHA4 124 aa8.53□□□□□ -1.04
UBBP4-202ENST00000584755 RBM3P98179 157 aaKnown RBP8.51□□□□□ -1.05
UBBP4-202ENST00000584755 SMIM29Q86T20 159 aa8.51□□□□□ -1.05
UBBP4-202ENST00000584755 C14orf132Q9NPU4 83 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms