RNA–Protein interactions for RNA: ENST00000584717.1

CCDC57-219, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 513 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-219ENST00000584717 TAL2Q16559 108 aa9.6□□□□□ -0.87
CCDC57-219ENST00000584717 C2orf91Q6ZV80 131 aa9.6□□□□□ -0.87
CCDC57-219ENST00000584717 COPS9Q8WXC6 57 aa9.6□□□□□ -0.87
CCDC57-219ENST00000584717 SPANXB1Q9NS25 103 aaPredicted RBP9.6□□□□□ -0.87
CCDC57-219ENST00000584717 SMIM13P0DJ93 91 aa9.59□□□□□ -0.87
CCDC57-219ENST00000584717 PRLHP81277 87 aa9.59□□□□□ -0.87
CCDC57-219ENST00000584717 IGLV7-46A0A075B6I9 117 aa9.58□□□□□ -0.88
CCDC57-219ENST00000584717 PFN2P35080 140 aa9.58□□□□□ -0.88
CCDC57-219ENST00000584717 TPRXLQ17RH7 258 aa9.58□□□□□ -0.88
CCDC57-219ENST00000584717 HIST1H4GQ99525 98 aa9.58□□□□□ -0.88
CCDC57-219ENST00000584717 IFITM1P13164 125 aa9.57□□□□□ -0.88
CCDC57-219ENST00000584717 SPANXDQ9BXN6 97 aa9.57□□□□□ -0.88
CCDC57-219ENST00000584717 SPANXCQ9NY87 97 aa9.57□□□□□ -0.88
CCDC57-219ENST00000584717 A0A0U1RRA0 63 aa9.56□□□□□ -0.88
CCDC57-219ENST00000584717 PCP4L1A6NKN8 68 aa9.56□□□□□ -0.88
CCDC57-219ENST00000584717 CTAG1AP78358 180 aa9.56□□□□□ -0.88
CCDC57-219ENST00000584717 HSD52Q0P140 79 aa9.56□□□□□ -0.88
CCDC57-219ENST00000584717 LITAFQ99732 161 aa9.56□□□□□ -0.88
CCDC57-219ENST00000584717 KRTAP9-6A0A140TA67 174 aa9.55□□□□□ -0.88
CCDC57-219ENST00000584717 ADAMTSL4-AS1Q5T5F5 129 aa9.55□□□□□ -0.88
CCDC57-219ENST00000584717 FAM19A1Q7Z5A9 133 aa9.55□□□□□ -0.88
CCDC57-219ENST00000584717 MIR7-3HGQ8N6C7 128 aa9.54□□□□□ -0.88
CCDC57-219ENST00000584717 TMEM126AQ9H061 195 aa9.54□□□□□ -0.88
CCDC57-219ENST00000584717 VPREB1P12018 145 aa9.53□□□□□ -0.88
CCDC57-219ENST00000584717 C3orf22Q8N5N4 141 aa9.53□□□□□ -0.88
CCDC57-219ENST00000584717 PPDPFQ9H3Y8 114 aa9.53□□□□□ -0.88
CCDC57-219ENST00000584717 M0R143 59 aa9.52□□□□□ -0.89
CCDC57-219ENST00000584717 RPL24P83731 157 aaKnown RBP9.52□□□□□ -0.89
CCDC57-219ENST00000584717 MUSTN1Q8IVN3 82 aa9.52□□□□□ -0.89
CCDC57-219ENST00000584717 CEND1Q8N111 149 aa9.52□□□□□ -0.89
CCDC57-219ENST00000584717 M0R378 163 aa9.51□□□□□ -0.89
CCDC57-219ENST00000584717 DAND5Q8N907 189 aa9.51□□□□□ -0.89
CCDC57-219ENST00000584717 LINC00308Q8TCZ7 52 aa9.51□□□□□ -0.89
CCDC57-219ENST00000584717 SND1-IT1Q9HBX3 110 aa9.51□□□□□ -0.89
CCDC57-219ENST00000584717 LOC107984156A0A0G2JMH3 177 aa9.5□□□□□ -0.89
CCDC57-219ENST00000584717 ARL17AQ8IVW1 177 aa9.5□□□□□ -0.89
CCDC57-219ENST00000584717 TMEM238LA0A1B0GVL6 79 aa9.49□□□□□ -0.89
CCDC57-219ENST00000584717 A6NJY4 79 aa9.49□□□□□ -0.89
CCDC57-219ENST00000584717 Q8NDZ9 215 aa9.49□□□□□ -0.89
CCDC57-219ENST00000584717 NPC2P61916 151 aa9.48□□□□□ -0.89
CCDC57-219ENST00000584717 HIGD2AQ9BW72 106 aa9.48□□□□□ -0.89
CCDC57-219ENST00000584717 HINT1P49773 126 aaPredicted RBP9.47□□□□□ -0.89
CCDC57-219ENST00000584717 BVES-AS1Q5T3Y7 98 aa9.46□□□□□ -0.9
CCDC57-219ENST00000584717 SOSTDC1Q6X4U4 206 aa9.45□□□□□ -0.9
CCDC57-219ENST00000584717 A4D1N5 150 aa9.44□□□□□ -0.9
CCDC57-219ENST00000584717 A6NDN8 102 aa9.44□□□□□ -0.9
CCDC57-219ENST00000584717 NDUFC2O95298 119 aa9.44□□□□□ -0.9
CCDC57-219ENST00000584717 FXYD2P54710 66 aa9.43□□□□□ -0.9
CCDC57-219ENST00000584717 SPAG11AQ6PDA7 123 aa9.43□□□□□ -0.9
CCDC57-219ENST00000584717 SPRR4Q96PI1 79 aa9.43□□□□□ -0.9
CCDC57-219ENST00000584717 EIF4EBP3O60516 100 aaPredicted RBP9.42□□□□□ -0.9
CCDC57-219ENST00000584717 BATFQ16520 125 aa9.42□□□□□ -0.9
CCDC57-219ENST00000584717 FP248Q71RG6 208 aaPredicted RBP9.41□□□□□ -0.9
CCDC57-219ENST00000584717 C4orf48Q5BLP8 95 aa9.4□□□□□ -0.9
CCDC57-219ENST00000584717 LINC00337Q8N6G1 96 aa9.4□□□□□ -0.9
CCDC57-219ENST00000584717 RAB37Q96AX2 223 aa9.4□□□□□ -0.9
CCDC57-219ENST00000584717 NHP2Q9NX24 153 aaKnown RBP9.4□□□□□ -0.9
CCDC57-219ENST00000584717 TRAV13-2A0A0B4J235 113 aa9.39□□□□□ -0.91
CCDC57-219ENST00000584717 A0A0B4J2C4 111 aa9.39□□□□□ -0.91
CCDC57-219ENST00000584717 TRBV10-2A0A0K0K1G8 114 aa9.39□□□□□ -0.91
CCDC57-219ENST00000584717 CFC1BP0CG36 223 aa9.39□□□□□ -0.91
CCDC57-219ENST00000584717 CFC1P0CG37 223 aa9.39□□□□□ -0.91
CCDC57-219ENST00000584717 KRTAP13-3Q3SY46 172 aa9.39□□□□□ -0.91
CCDC57-219ENST00000584717 Q8NBF4 154 aa9.39□□□□□ -0.91
CCDC57-219ENST00000584717 SNHG12Q9BXW3 62 aa9.39□□□□□ -0.91
CCDC57-219ENST00000584717 A0A1B0GWB2 263 aa9.38□□□□□ -0.91
CCDC57-219ENST00000584717 ZNF706Q9Y5V0 76 aaPredicted RBP9.38□□□□□ -0.91
CCDC57-219ENST00000584717 PRO1854Q9UHT4 67 aa9.37□□□□□ -0.91
CCDC57-219ENST00000584717 COL5A1-AS1Q5SY13 56 aa9.36□□□□□ -0.91
CCDC57-219ENST00000584717 ASB16-AS1Q495Z4 193 aa9.35□□□□□ -0.91
CCDC57-219ENST00000584717 OR13C6PQ8NH95 151 aa9.35□□□□□ -0.91
CCDC57-219ENST00000584717 KRTAP4-1Q9BYQ7 146 aa9.35□□□□□ -0.91
CCDC57-219ENST00000584717 CBY1Q9Y3M2 126 aa9.35□□□□□ -0.91
CCDC57-219ENST00000584717 LINC01547P58512 204 aaPredicted RBP9.34□□□□□ -0.91
CCDC57-219ENST00000584717 S100A7L2Q5SY68 101 aa9.34□□□□□ -0.91
CCDC57-219ENST00000584717 PRYO14603 147 aa9.33□□□□□ -0.92
CCDC57-219ENST00000584717 NCR3O14931 201 aa9.33□□□□□ -0.92
CCDC57-219ENST00000584717 SMCR5Q8TEV8 140 aa9.33□□□□□ -0.92
CCDC57-219ENST00000584717 SPINK1P00995 79 aa9.31□□□□□ -0.92
CCDC57-219ENST00000584717 K7ERJ3 54 aa9.3□□□□□ -0.92
CCDC57-219ENST00000584717 ETDCA0A1B0GVM5 59 aa9.29□□□□□ -0.92
CCDC57-219ENST00000584717 IGLV6-57P01721 117 aa9.29□□□□□ -0.92
CCDC57-219ENST00000584717 SPRR1AP35321 89 aa9.29□□□□□ -0.92
CCDC57-219ENST00000584717 SEC61BP60468 96 aaKnown RBP9.29□□□□□ -0.92
CCDC57-219ENST00000584717 Q1RN00 199 aa9.29□□□□□ -0.92
CCDC57-219ENST00000584717 KRTAP4-16G5E9R7 235 aaPredicted RBP9.28□□□□□ -0.92
CCDC57-219ENST00000584717 KCNQ1DNQ9H478 68 aa9.28□□□□□ -0.92
CCDC57-219ENST00000584717 IGLV9-49A0A0B4J1Y8 123 aa9.27□□□□□ -0.93
CCDC57-219ENST00000584717 TRBV10-3A0A0K0K1G6 114 aa9.27□□□□□ -0.93
CCDC57-219ENST00000584717 H7C2G1 150 aa9.27□□□□□ -0.93
CCDC57-219ENST00000584717 MOBPQ13875 183 aa9.27□□□□□ -0.93
CCDC57-219ENST00000584717 LINC00483Q53H64 154 aa9.27□□□□□ -0.93
CCDC57-219ENST00000584717 GAGE2AQ6NT46 116 aa9.27□□□□□ -0.93
CCDC57-219ENST00000584717 TAX1BP3O14907 124 aa9.26□□□□□ -0.93
CCDC57-219ENST00000584717 C9orf118A6NHY6 69 aa9.25□□□□□ -0.93
CCDC57-219ENST00000584717 COX6CP09669 75 aa9.25□□□□□ -0.93
CCDC57-219ENST00000584717 PSMB2P49721 201 aa9.25□□□□□ -0.93
CCDC57-219ENST00000584717 LCE2DQ5TA82 110 aaPredicted RBP9.25□□□□□ -0.93
CCDC57-219ENST00000584717 Q8N377 158 aa9.25□□□□□ -0.93
CCDC57-219ENST00000584717 VAMP3Q15836 100 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms