RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	HERVK_113	P61574	105 aa		6.47	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	ARL17A	Q8IVW1	177 aa		6.47	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	ST20-AS1	Q8NBB2	130 aa		6.47	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	SVIP	Q8NHG7	77 aa		6.47	□□□□□ -1.37
CDK5RAP3-223	ENST00000582114	SLC25A20	O43772	301 aa		6.46	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	EIF4EBP3	O60516	100 aa	Predicted RBP	6.46	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	DPM2	O94777	84 aa		6.46	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	IGLV6-57	P01721	117 aa		6.46	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	SOSTDC1	Q6X4U4	206 aa		6.46	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	IGKC	P01834	107 aa		6.45	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	RPS29	P62273	56 aa	Known RBP	6.45	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	HSPB8	Q9UJY1	196 aa		6.45	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	ZNF73	O43830	326 aa	Predicted RBP	6.44	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	NDUFC2	O95298	119 aa		6.44	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	NMU	P48645	174 aa		6.44	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	ADAMTSL4-AS1	Q5T5F5	129 aa		6.44	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114		A0A0J9YXY3	114 aa		6.43	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	JOSD1	Q15040	202 aa	Predicted RBP	6.43	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	XP32	Q5T750	250 aa		6.43	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	HRCT1	Q6UXD1	115 aa		6.43	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114	OR13C6P	Q8NH95	151 aa		6.4	□□□□□ -1.38
CDK5RAP3-223	ENST00000582114		E9PLD3	99 aa		6.39	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	HINT1	P49773	126 aa	Predicted RBP	6.39	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	C9orf92	A6NGG3	77 aa		6.38	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	LINC00308	Q8TCZ7	52 aa		6.37	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	PCOTH	Q58A44	107 aa		6.36	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	LCE2C	Q5TA81	110 aa		6.36	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	LITAF	Q99732	161 aa		6.36	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	SPANXC	Q9NY87	97 aa		6.36	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	TMEM238L	A0A1B0GVL6	79 aa		6.35	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114		Q1RN00	199 aa		6.35	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	DEFB105A	Q8NG35	78 aa		6.35	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	LIMD2	Q9BT23	127 aa		6.35	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	TTTY13	Q9BZ97	58 aa		6.35	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	DHRS4-AS1	Q9P1J3	65 aa		6.35	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	C5orf52	A6NGY3	159 aa		6.34	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	COLCA2	A8K830	154 aa		6.34	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	SYS1-DBNDD2	H3BUS1	97 aa		6.34	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	SPRR1B	P22528	89 aa		6.34	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	SLC25A34	Q6PIV7	304 aa		6.34	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	LAMTOR3	Q9UHA4	124 aa		6.34	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	CBY1	Q9Y3M2	126 aa		6.34	□□□□□ -1.39
CDK5RAP3-223	ENST00000582114	IGLV8-61	A0A075B6I0	122 aa		6.33	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	ZNF815P	A8K554	130 aa		6.33	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114		H7C2G1	150 aa		6.33	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	COX7B	P24311	80 aa		6.33	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	C6orf99	Q4VX62	202 aa		6.33	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	SLC7A5P1	Q8MH63	180 aa		6.33	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	TAL2	Q16559	108 aa		6.32	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	KRTAP19-2	Q3LHN2	52 aa		6.32	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	SPANXD	Q9BXN6	97 aa		6.32	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	FSIP2	Q5CZC0	6907 aa		6.32	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	TIMM17B	O60830	172 aa		6.31	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	ELOF1	P60002	83 aa	Known RBP	6.31	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114		A0A0G2JQZ4	141 aa		6.3	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	MT1H	P80294	61 aa		6.3	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	LINC01545	Q5VT33	79 aa		6.3	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	CRCT1	Q9UGL9	99 aa		6.29	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	TEX49	A0A1B0GTD5	131 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	HIST1H2BK	O60814	126 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	HIST1H2BJ	P06899	126 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	HIST1H2BO	P23527	126 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	HIST1H2BB	P33778	126 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	HIST1H2BD	P58876	126 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	HIST1H2BC	P62807	126 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	HIST2H2BE	Q16778	126 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	LINC00518	Q8N0U6	118 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	HIST1H2BH	Q93079	126 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	HIST1H2BN	Q99877	126 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	HIST1H2BM	Q99879	126 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	PRO1933	Q9H354	126 aa		6.28	□□□□□ -1.4
CDK5RAP3-223	ENST00000582114	PET117	Q6UWS5	81 aa		6.27	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114	C3orf79	P0CE67	100 aa		6.26	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114	CD164	Q04900	197 aa		6.26	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114	SCGB1D4	Q6XE38	83 aa		6.26	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114	SMIM29	Q86T20	159 aa		6.26	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114		A6NDN8	102 aa		6.25	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114	AKR1D1	P51857	326 aa		6.25	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114	KRTDAP	P60985	99 aa		6.25	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114	C1orf195	Q5TG92	126 aa		6.25	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114		A0A1B0GWB2	263 aa		6.23	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114	TRBV7-6	A0A0J9YX20	115 aa		6.22	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114	ANKRD39	Q53RE8	183 aa		6.22	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114	MUSTN1	Q8IVN3	82 aa		6.22	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114	ATOH7	Q8N100	152 aa		6.22	□□□□□ -1.41
CDK5RAP3-223	ENST00000582114	IGLV5-48	A0A075B6I7	105 aa		6.21	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114	CFC1B	P0CG36	223 aa		6.21	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114		M0R2T5	61 aa		6.2	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114	IFITM1	P13164	125 aa		6.2	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114	KRTAP10-6	P60371	365 aa	Predicted RBP	6.2	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114	RPL37	P61927	97 aa	Known RBP	6.2	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114		Q5XG85	94 aa		6.2	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114	PCP2	Q8IVA1	136 aa		6.2	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114	LOR	P23490	312 aa	Predicted RBP	6.19	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114	SMIM11B	Q8TCY0	68 aa		6.19	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114	COPS9	Q8WXC6	57 aa		6.19	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114	C20orf202	A1L168	122 aa		6.18	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114	COX6B2	Q6YFQ2	88 aa		6.18	□□□□□ -1.42
CDK5RAP3-223	ENST00000582114	TRAV13-2	A0A0B4J235	113 aa		6.16	□□□□□ -1.42

Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms