RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 IGLV5-37A0A075B6J1 123 aa8□□□□□ -1.13
SRSF1-204ENST00000581979 TRAV23DV6A0A075B6W5 121 aa8□□□□□ -1.13
SRSF1-204ENST00000581979 EPM2AB3EWF7 344 aa8□□□□□ -1.13
SRSF1-204ENST00000581979 H0YGX0 51 aa8□□□□□ -1.13
SRSF1-204ENST00000581979 LST1O00453 97 aa8□□□□□ -1.13
SRSF1-204ENST00000581979 C6orf99Q4VX62 202 aa8□□□□□ -1.13
SRSF1-204ENST00000581979 C7orf33Q8WU49 177 aa8□□□□□ -1.13
SRSF1-204ENST00000581979 CBY1Q9Y3M2 126 aa8□□□□□ -1.13
SRSF1-204ENST00000581979 IGLV5-52A0A0A0MRZ9 124 aa7.99□□□□□ -1.13
SRSF1-204ENST00000581979 SDIM1Q6ZPB5 146 aa7.99□□□□□ -1.13
SRSF1-204ENST00000581979 MTURNQ8N3F0 131 aa7.99□□□□□ -1.13
SRSF1-204ENST00000581979 C22orf24Q9Y442 160 aa7.99□□□□□ -1.13
SRSF1-204ENST00000581979 CHTF8P0CG12 524 aa7.98□□□□□ -1.13
SRSF1-204ENST00000581979 F8W1H4 67 aa7.98□□□□□ -1.13
SRSF1-204ENST00000581979 KRTAP7-1Q8IUC3 87 aa7.98□□□□□ -1.13
SRSF1-204ENST00000581979 DIRC1Q969H9 104 aa7.98□□□□□ -1.13
SRSF1-204ENST00000581979 FAM218AQ96MZ4 157 aa7.98□□□□□ -1.13
SRSF1-204ENST00000581979 LINC00474Q9P2X8 69 aa7.98□□□□□ -1.13
SRSF1-204ENST00000581979 C9JAW5 83 aa7.97□□□□□ -1.13
SRSF1-204ENST00000581979 ZNF73O43830 326 aaPredicted RBP7.97□□□□□ -1.13
SRSF1-204ENST00000581979 MRPL55Q7Z7F7 128 aaKnown RBP7.97□□□□□ -1.13
SRSF1-204ENST00000581979 LINC00167Q96N53 147 aa7.97□□□□□ -1.13
SRSF1-204ENST00000581979 FAT1Q14517 4588 aa7.97□□□□□ -1.13
SRSF1-204ENST00000581979 A0A1W2PNN7 141 aa7.96□□□□□ -1.14
SRSF1-204ENST00000581979 M0QXV9 152 aa7.96□□□□□ -1.14
SRSF1-204ENST00000581979 A0A087WYN8 130 aa7.95□□□□□ -1.14
SRSF1-204ENST00000581979 RPL37AP8A6NKH3 93 aa7.95□□□□□ -1.14
SRSF1-204ENST00000581979 DPH3Q96FX2 82 aa7.95□□□□□ -1.14
SRSF1-204ENST00000581979 PRO0461Q9UI25 63 aa7.95□□□□□ -1.14
SRSF1-204ENST00000581979 TRACP01848 142 aa7.95□□□□□ -1.14
SRSF1-204ENST00000581979 Q5VSD8 79 aa7.95□□□□□ -1.14
SRSF1-204ENST00000581979 IGLV1-50A0A075B6I6 118 aa7.94□□□□□ -1.14
SRSF1-204ENST00000581979 SLC25A20O43772 301 aa7.94□□□□□ -1.14
SRSF1-204ENST00000581979 DNAL4O96015 105 aa7.94□□□□□ -1.14
SRSF1-204ENST00000581979 KCNQ1DNQ9H478 68 aa7.94□□□□□ -1.14
SRSF1-204ENST00000581979 PRYO14603 147 aa7.93□□□□□ -1.14
SRSF1-204ENST00000581979 COX7BP24311 80 aa7.93□□□□□ -1.14
SRSF1-204ENST00000581979 PANO1I0J062 215 aa7.92□□□□□ -1.14
SRSF1-204ENST00000581979 SNCGO76070 127 aa7.92□□□□□ -1.14
SRSF1-204ENST00000581979 SPACA4Q8TDM5 124 aa7.92□□□□□ -1.14
SRSF1-204ENST00000581979 TRBV7-6A0A0J9YX20 115 aa7.92□□□□□ -1.14
SRSF1-204ENST00000581979 A0A1B0GX51 115 aa7.92□□□□□ -1.14
SRSF1-204ENST00000581979 SMR3BP02814 79 aaPredicted RBP7.92□□□□□ -1.14
SRSF1-204ENST00000581979 INAFM2P0DMQ5 153 aa7.92□□□□□ -1.14
SRSF1-204ENST00000581979 SMCPP49901 116 aaPredicted RBP7.92□□□□□ -1.14
SRSF1-204ENST00000581979 FAM30AQ9NZY2 134 aa7.92□□□□□ -1.14
SRSF1-204ENST00000581979 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.92□□□□□ -1.14
SRSF1-204ENST00000581979 ELOF1P60002 83 aaKnown RBP7.91□□□□□ -1.14
SRSF1-204ENST00000581979 LINC00575Q6W349 94 aa7.91□□□□□ -1.14
SRSF1-204ENST00000581979 Q6ZSA8 131 aa7.91□□□□□ -1.14
SRSF1-204ENST00000581979 SRRM2Q9UQ35 2752 aaKnown RBP7.91□□□□□ -1.14
SRSF1-204ENST00000581979 H3BT86 120 aa7.9□□□□□ -1.14
SRSF1-204ENST00000581979 UBE2BP63146 152 aa7.9□□□□□ -1.14
SRSF1-204ENST00000581979 HAMPP81172 84 aa7.9□□□□□ -1.14
SRSF1-204ENST00000581979 PHF5AQ7RTV0 110 aaKnown RBP7.9□□□□□ -1.14
SRSF1-204ENST00000581979 ANKRD29Q8N6D5 301 aa7.9□□□□□ -1.14
SRSF1-204ENST00000581979 hADV29S1A0JD25 119 aa7.89□□□□□ -1.15
SRSF1-204ENST00000581979 FAM229AH3BQW9 127 aa7.89□□□□□ -1.15
SRSF1-204ENST00000581979 VPS13BQ7Z7G8 4022 aa7.89□□□□□ -1.15
SRSF1-204ENST00000581979 DNAH8Q96JB1 4490 aa7.88□□□□□ -1.15
SRSF1-204ENST00000581979 ETDCA0A1B0GVM5 59 aa7.88□□□□□ -1.15
SRSF1-204ENST00000581979 REG3GQ6UW15 175 aa7.88□□□□□ -1.15
SRSF1-204ENST00000581979 BAALC-AS2P0C853 105 aa7.87□□□□□ -1.15
SRSF1-204ENST00000581979 SPRR1AP35321 89 aa7.87□□□□□ -1.15
SRSF1-204ENST00000581979 ETDBQ3ZM63 59 aa7.87□□□□□ -1.15
SRSF1-204ENST00000581979 LINC00528Q8N1L1 170 aa7.87□□□□□ -1.15
SRSF1-204ENST00000581979 DMBT1Q9UGM3 2413 aaPredicted RBP7.87□□□□□ -1.15
SRSF1-204ENST00000581979 ORMDL1Q9P0S3 153 aa7.86□□□□□ -1.15
SRSF1-204ENST00000581979 LINC01600Q96MT4 127 aa7.86□□□□□ -1.15
SRSF1-204ENST00000581979 FLG2Q5D862 2391 aaPredicted RBP7.86□□□□□ -1.15
SRSF1-204ENST00000581979 B5MCH6 92 aa7.85□□□□□ -1.15
SRSF1-204ENST00000581979 KRTAP4-16G5E9R7 235 aaPredicted RBP7.85□□□□□ -1.15
SRSF1-204ENST00000581979 HERC1Q15751 4861 aa7.84□□□□□ -1.15
SRSF1-204ENST00000581979 Q6ZRX8 168 aa7.84□□□□□ -1.15
SRSF1-204ENST00000581979 TEN1Q86WV5 123 aa7.84□□□□□ -1.15
SRSF1-204ENST00000581979 MYCBP2O75592 4640 aa7.84□□□□□ -1.15
SRSF1-204ENST00000581979 PLAC8Q9NZF1 115 aa7.83□□□□□ -1.16
SRSF1-204ENST00000581979 Q6ZQY7 126 aa7.83□□□□□ -1.16
SRSF1-204ENST00000581979 FAM19A1Q7Z5A9 133 aa7.83□□□□□ -1.16
SRSF1-204ENST00000581979 KRTAP11-1Q8IUC1 163 aa7.83□□□□□ -1.16
SRSF1-204ENST00000581979 DHRS4-AS1Q9P1J3 65 aa7.83□□□□□ -1.16
SRSF1-204ENST00000581979 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.82□□□□□ -1.16
SRSF1-204ENST00000581979 SCXQ7RTU7 201 aa7.82□□□□□ -1.16
SRSF1-204ENST00000581979 PLA2G1BP04054 148 aaKnown RBP7.81□□□□□ -1.16
SRSF1-204ENST00000581979 TMEM256-PLSCR3K7ERE1 68 aa7.81□□□□□ -1.16
SRSF1-204ENST00000581979 PPDPFLQ8WWR9 84 aa7.81□□□□□ -1.16
SRSF1-204ENST00000581979 GHRHP01286 108 aa7.8□□□□□ -1.16
SRSF1-204ENST00000581979 OCIAD2Q56VL3 154 aa7.8□□□□□ -1.16
SRSF1-204ENST00000581979 Q9BRP9 147 aa7.8□□□□□ -1.16
SRSF1-204ENST00000581979 PRLHP81277 87 aa7.79□□□□□ -1.16
SRSF1-204ENST00000581979 CIRBP-AS1Q8TBR5 109 aa7.79□□□□□ -1.16
SRSF1-204ENST00000581979 TEX49A0A1B0GTD5 131 aa7.78□□□□□ -1.16
SRSF1-204ENST00000581979 H3BQ85 93 aa7.78□□□□□ -1.16
SRSF1-204ENST00000581979 K7ERU9 68 aa7.78□□□□□ -1.16
SRSF1-204ENST00000581979 UBE2AP49459 152 aa7.78□□□□□ -1.16
SRSF1-204ENST00000581979 BCE1O60756 84 aa7.77□□□□□ -1.17
SRSF1-204ENST00000581979 SMCR5Q8TEV8 140 aa7.77□□□□□ -1.17
SRSF1-204ENST00000581979 J3QR89 54 aa7.76□□□□□ -1.17
SRSF1-204ENST00000581979 KRTAP10-4P60372 401 aaPredicted RBP7.76□□□□□ -1.17
SRSF1-204ENST00000581979 DEFB105AQ8NG35 78 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms