RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 DEFB105AQ8NG35 78 aa6.74□□□□□ -1.33
CSNK1D-213ENST00000580446 Q96NJ1 140 aa6.74□□□□□ -1.33
CSNK1D-213ENST00000580446 NXT2Q9NPJ8 142 aaKnown RBP6.74□□□□□ -1.33
CSNK1D-213ENST00000580446 K7EMI3 77 aa6.73□□□□□ -1.33
CSNK1D-213ENST00000580446 MEIG1Q5JSS6 88 aa6.73□□□□□ -1.33
CSNK1D-213ENST00000580446 TRAV23DV6A0A075B6W5 121 aa6.72□□□□□ -1.33
CSNK1D-213ENST00000580446 LOC107984156A0A0G2JMH3 177 aa6.72□□□□□ -1.33
CSNK1D-213ENST00000580446 SLC25A34Q6PIV7 304 aa6.72□□□□□ -1.33
CSNK1D-213ENST00000580446 Q6ZVH6 145 aa6.72□□□□□ -1.33
CSNK1D-213ENST00000580446 ARL17AQ8IVW1 177 aa6.72□□□□□ -1.33
CSNK1D-213ENST00000580446 KRTAP16-1A8MUX0 517 aa6.7□□□□□ -1.34
CSNK1D-213ENST00000580446 ZNF73O43830 326 aaPredicted RBP6.7□□□□□ -1.34
CSNK1D-213ENST00000580446 G0S2P27469 103 aa6.7□□□□□ -1.34
CSNK1D-213ENST00000580446 TMEM170BQ5T4T1 132 aa6.7□□□□□ -1.34
CSNK1D-213ENST00000580446 C11orf86A6NJI1 115 aa6.69□□□□□ -1.34
CSNK1D-213ENST00000580446 SPRR2EP22531 72 aa6.69□□□□□ -1.34
CSNK1D-213ENST00000580446 SPRR2BP35325 72 aa6.69□□□□□ -1.34
CSNK1D-213ENST00000580446 SPRR2AP35326 72 aa6.69□□□□□ -1.34
CSNK1D-213ENST00000580446 AKR1D1P51857 326 aa6.69□□□□□ -1.34
CSNK1D-213ENST00000580446 HRES1P13985 223 aa6.68□□□□□ -1.34
CSNK1D-213ENST00000580446 RGS21Q2M5E4 152 aa6.68□□□□□ -1.34
CSNK1D-213ENST00000580446 S100A7L2Q5SY68 101 aa6.68□□□□□ -1.34
CSNK1D-213ENST00000580446 SFTA2Q6UW10 78 aa6.68□□□□□ -1.34
CSNK1D-213ENST00000580446 ATP5L2Q7Z4Y8 100 aa6.68□□□□□ -1.34
CSNK1D-213ENST00000580446 MPLKIPQ8TAP9 179 aa6.68□□□□□ -1.34
CSNK1D-213ENST00000580446 C9JQL5 133 aa6.67□□□□□ -1.34
CSNK1D-213ENST00000580446 RBM12B-AS1Q9P1G2 102 aa6.67□□□□□ -1.34
CSNK1D-213ENST00000580446 NAT8Q9UHE5 227 aa6.67□□□□□ -1.34
CSNK1D-213ENST00000580446 TCL1BO95988 128 aa6.66□□□□□ -1.34
CSNK1D-213ENST00000580446 IGFL1Q6UW32 110 aa6.66□□□□□ -1.34
CSNK1D-213ENST00000580446 TAL2Q16559 108 aa6.65□□□□□ -1.34
CSNK1D-213ENST00000580446 TRBV10-2A0A0K0K1G8 114 aa6.64□□□□□ -1.35
CSNK1D-213ENST00000580446 C5orf52A6NGY3 159 aa6.64□□□□□ -1.35
CSNK1D-213ENST00000580446 BLOC1S1P78537 153 aa6.64□□□□□ -1.35
CSNK1D-213ENST00000580446 SLC51BQ86UW2 128 aa6.64□□□□□ -1.35
CSNK1D-213ENST00000580446 SPANXB1Q9NS25 103 aaPredicted RBP6.62□□□□□ -1.35
CSNK1D-213ENST00000580446 A8MUU9 505 aa6.61□□□□□ -1.35
CSNK1D-213ENST00000580446 A8MWP4 228 aa6.58□□□□□ -1.36
CSNK1D-213ENST00000580446 SMCPP49901 116 aaPredicted RBP6.58□□□□□ -1.36
CSNK1D-213ENST00000580446 TEX49A0A1B0GTD5 131 aa6.57□□□□□ -1.36
CSNK1D-213ENST00000580446 TMEM223A0PJW6 202 aa6.57□□□□□ -1.36
CSNK1D-213ENST00000580446 NPC2P61916 151 aa6.57□□□□□ -1.36
CSNK1D-213ENST00000580446 SPRR2FQ96RM1 72 aa6.57□□□□□ -1.36
CSNK1D-213ENST00000580446 DHRS4-AS1Q9P1J3 65 aa6.57□□□□□ -1.36
CSNK1D-213ENST00000580446 EIF4EBP3O60516 100 aaPredicted RBP6.56□□□□□ -1.36
CSNK1D-213ENST00000580446 FA2HQ7L5A8 372 aa6.56□□□□□ -1.36
CSNK1D-213ENST00000580446 BAGE3Q86Y29 109 aa6.56□□□□□ -1.36
CSNK1D-213ENST00000580446 A6NJY4 79 aa6.55□□□□□ -1.36
CSNK1D-213ENST00000580446 HINT1P49773 126 aaPredicted RBP6.55□□□□□ -1.36
CSNK1D-213ENST00000580446 A0A096LNJ9 63 aa6.54□□□□□ -1.36
CSNK1D-213ENST00000580446 LINC01546A6NGU7 62 aa6.54□□□□□ -1.36
CSNK1D-213ENST00000580446 NOTCH2NLQ7Z3S9 236 aa6.54□□□□□ -1.36
CSNK1D-213ENST00000580446 MAP1LC3CQ9BXW4 147 aa6.54□□□□□ -1.36
CSNK1D-213ENST00000580446 HERV-K104P63124 156 aa6.53□□□□□ -1.36
CSNK1D-213ENST00000580446 PMCHL1Q16048 86 aa6.53□□□□□ -1.36
CSNK1D-213ENST00000580446 TCTE3Q8IZS6 198 aa6.53□□□□□ -1.36
CSNK1D-213ENST00000580446 SOSTDC1Q6X4U4 206 aa6.52□□□□□ -1.37
CSNK1D-213ENST00000580446 MIEN1Q9BRT3 115 aa6.52□□□□□ -1.37
CSNK1D-213ENST00000580446 RPS10P5Q9NQ39 176 aa6.52□□□□□ -1.37
CSNK1D-213ENST00000580446 LINC01549A6NIU2 74 aa6.51□□□□□ -1.37
CSNK1D-213ENST00000580446 MT1BP07438 61 aa6.51□□□□□ -1.37
CSNK1D-213ENST00000580446 hCG_2014768A0A024R1R8 64 aa6.5□□□□□ -1.37
CSNK1D-213ENST00000580446 HBDP02042 147 aa6.5□□□□□ -1.37
CSNK1D-213ENST00000580446 TSPEAR-AS2P59090 65 aa6.5□□□□□ -1.37
CSNK1D-213ENST00000580446 SMCO4Q9NRQ5 59 aa6.5□□□□□ -1.37
CSNK1D-213ENST00000580446 COX7BP24311 80 aa6.49□□□□□ -1.37
CSNK1D-213ENST00000580446 DSCR10P59022 87 aa6.49□□□□□ -1.37
CSNK1D-213ENST00000580446 KRTAP10-5P60370 271 aa6.49□□□□□ -1.37
CSNK1D-213ENST00000580446 OR13C6PQ8NH95 151 aa6.49□□□□□ -1.37
CSNK1D-213ENST00000580446 NDUFC2O95298 119 aa6.48□□□□□ -1.37
CSNK1D-213ENST00000580446 MYMXA0A1B0GTQ4 84 aa6.47□□□□□ -1.37
CSNK1D-213ENST00000580446 SPRR2DP22532 72 aa6.47□□□□□ -1.37
CSNK1D-213ENST00000580446 ELOF1P60002 83 aaKnown RBP6.47□□□□□ -1.37
CSNK1D-213ENST00000580446 TRBV7-7A0A0K0K1E9 115 aa6.46□□□□□ -1.38
CSNK1D-213ENST00000580446 LINC00587B1AMM8 73 aa6.46□□□□□ -1.38
CSNK1D-213ENST00000580446 COMMD7Q86VX2 200 aa6.46□□□□□ -1.38
CSNK1D-213ENST00000580446 LCE1AQ5T7P2 110 aa6.45□□□□□ -1.38
CSNK1D-213ENST00000580446 IGLV5-48A0A075B6I7 105 aa6.43□□□□□ -1.38
CSNK1D-213ENST00000580446 URB1-AS1Q96HZ7 61 aa6.42□□□□□ -1.38
CSNK1D-213ENST00000580446 RHEBQ15382 184 aa6.41□□□□□ -1.38
CSNK1D-213ENST00000580446 MTURNQ8N3F0 131 aa6.41□□□□□ -1.38
CSNK1D-213ENST00000580446 LST1O00453 97 aa6.4□□□□□ -1.38
CSNK1D-213ENST00000580446 ADAMTSL4-AS1Q5T5F5 129 aa6.4□□□□□ -1.38
CSNK1D-213ENST00000580446 GHRHP01286 108 aa6.39□□□□□ -1.39
CSNK1D-213ENST00000580446 PEA15Q15121 130 aa6.39□□□□□ -1.39
CSNK1D-213ENST00000580446 Q5VV11 94 aa6.38□□□□□ -1.39
CSNK1D-213ENST00000580446 F8WEM9 126 aa6.36□□□□□ -1.39
CSNK1D-213ENST00000580446 CBY1Q9Y3M2 126 aa6.36□□□□□ -1.39
CSNK1D-213ENST00000580446 MT-ND4LP03901 98 aa6.35□□□□□ -1.39
CSNK1D-213ENST00000580446 LCE3BQ5TA77 95 aa6.35□□□□□ -1.39
CSNK1D-213ENST00000580446 LINC00518Q8N0U6 118 aa6.35□□□□□ -1.39
CSNK1D-213ENST00000580446 NDUFA5Q16718 116 aa6.34□□□□□ -1.39
CSNK1D-213ENST00000580446 CLEC2BQ92478 149 aa6.34□□□□□ -1.39
CSNK1D-213ENST00000580446 ANAPC16Q96DE5 110 aa6.33□□□□□ -1.4
CSNK1D-213ENST00000580446 A0A1W2PNM2 257 aa6.32□□□□□ -1.4
CSNK1D-213ENST00000580446 LEPROTO15243 131 aa6.32□□□□□ -1.4
CSNK1D-213ENST00000580446 J3QQQ9 107 aa6.3□□□□□ -1.4
CSNK1D-213ENST00000580446 FABP9Q0Z7S8 132 aa6.3□□□□□ -1.4
CSNK1D-213ENST00000580446 SPANXDQ9BXN6 97 aa6.3□□□□□ -1.4
CSNK1D-213ENST00000580446 A0A1B0GWB2 263 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms