RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 OBSCN-AS1Q96MR7 158 aa8.38□□□□□ -1.07
CDK5RAP3-217ENST00000580287 H0YGX0 51 aa8.38□□□□□ -1.07
CDK5RAP3-217ENST00000580287 S100A7L2Q5SY68 101 aa8.38□□□□□ -1.07
CDK5RAP3-217ENST00000580287 Q6JHZ5 121 aa8.38□□□□□ -1.07
CDK5RAP3-217ENST00000580287 LINC00846Q9NV44 126 aa8.38□□□□□ -1.07
CDK5RAP3-217ENST00000580287 FAM19A5Q7Z5A7 132 aaPredicted RBP8.37□□□□□ -1.07
CDK5RAP3-217ENST00000580287 XAGE1AQ9HD64 81 aa8.37□□□□□ -1.07
CDK5RAP3-217ENST00000580287 CAMK2N2Q96S95 79 aa8.36□□□□□ -1.07
CDK5RAP3-217ENST00000580287 A0A087WVE0 104 aa8.36□□□□□ -1.07
CDK5RAP3-217ENST00000580287 C6orf48Q9UBA6 75 aa8.36□□□□□ -1.07
CDK5RAP3-217ENST00000580287 VPS13DQ5THJ4 4388 aa8.36□□□□□ -1.07
CDK5RAP3-217ENST00000580287 NDUFC2O95298 119 aa8.35□□□□□ -1.07
CDK5RAP3-217ENST00000580287 C15orf56Q8N910 161 aa8.35□□□□□ -1.07
CDK5RAP3-217ENST00000580287 WWC2-AS2Q96NR7 200 aa8.35□□□□□ -1.07
CDK5RAP3-217ENST00000580287 FAM236DA0A1B0GTK5 79 aa8.34□□□□□ -1.07
CDK5RAP3-217ENST00000580287 FAM236CP0DP71 79 aa8.34□□□□□ -1.07
CDK5RAP3-217ENST00000580287 SERP2Q8N6R1 65 aa8.33□□□□□ -1.08
CDK5RAP3-217ENST00000580287 PLA2G2DQ9UNK4 145 aa8.33□□□□□ -1.08
CDK5RAP3-217ENST00000580287 RPS28P62857 69 aaKnown RBP8.33□□□□□ -1.08
CDK5RAP3-217ENST00000580287 C6orf99Q4VX62 202 aa8.33□□□□□ -1.08
CDK5RAP3-217ENST00000580287 NBDYA0A0U1RRE5 68 aa8.32□□□□□ -1.08
CDK5RAP3-217ENST00000580287 LY6G6CO95867 125 aa8.32□□□□□ -1.08
CDK5RAP3-217ENST00000580287 PRYO14603 147 aa8.31□□□□□ -1.08
CDK5RAP3-217ENST00000580287 Q6ZRU5 148 aa8.31□□□□□ -1.08
CDK5RAP3-217ENST00000580287 TMEM258P61165 79 aa8.3□□□□□ -1.08
CDK5RAP3-217ENST00000580287 GVQW2A0A096LPI5 108 aaPredicted RBP8.3□□□□□ -1.08
CDK5RAP3-217ENST00000580287 ORMDL1Q9P0S3 153 aa8.3□□□□□ -1.08
CDK5RAP3-217ENST00000580287 CD164Q04900 197 aa8.29□□□□□ -1.08
CDK5RAP3-217ENST00000580287 DPH3Q96FX2 82 aa8.29□□□□□ -1.08
CDK5RAP3-217ENST00000580287 DNAH2Q9P225 4427 aa8.29□□□□□ -1.08
CDK5RAP3-217ENST00000580287 CCKP06307 115 aa8.28□□□□□ -1.08
CDK5RAP3-217ENST00000580287 PSCAO43653 123 aa8.28□□□□□ -1.08
CDK5RAP3-217ENST00000580287 Q8N814 137 aa8.28□□□□□ -1.08
CDK5RAP3-217ENST00000580287 DSCR8Q96T75 97 aa8.27□□□□□ -1.09
CDK5RAP3-217ENST00000580287 TRBV10-3A0A0K0K1G6 114 aa8.27□□□□□ -1.09
CDK5RAP3-217ENST00000580287 RMI2Q96E14 147 aa8.26□□□□□ -1.09
CDK5RAP3-217ENST00000580287 LINC00528Q8N1L1 170 aa8.26□□□□□ -1.09
CDK5RAP3-217ENST00000580287 LINC00167Q96N53 147 aa8.26□□□□□ -1.09
CDK5RAP3-217ENST00000580287 NDUFC2-KCTD14E9PQ53 114 aa8.25□□□□□ -1.09
CDK5RAP3-217ENST00000580287 SYCNQ0VAF6 134 aa8.25□□□□□ -1.09
CDK5RAP3-217ENST00000580287 HYDINQ4G0P3 5121 aa8.25□□□□□ -1.09
CDK5RAP3-217ENST00000580287 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.24□□□□□ -1.09
CDK5RAP3-217ENST00000580287 IGLV6-57P01721 117 aa8.24□□□□□ -1.09
CDK5RAP3-217ENST00000580287 HRCT1Q6UXD1 115 aa8.24□□□□□ -1.09
CDK5RAP3-217ENST00000580287 FUSP35637 526 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDK5RAP3-217ENST00000580287 TRAV23DV6A0A075B6W5 121 aa8.23□□□□□ -1.09
CDK5RAP3-217ENST00000580287 LINC00476Q8WZB0 136 aa8.23□□□□□ -1.09
CDK5RAP3-217ENST00000580287 Q6ZRN7 208 aaPredicted RBP8.23□□□□□ -1.09
CDK5RAP3-217ENST00000580287 Q6ZRP5 223 aa8.23□□□□□ -1.09
CDK5RAP3-217ENST00000580287 LINC00575Q6W349 94 aa8.22□□□□□ -1.09
CDK5RAP3-217ENST00000580287 JMJD7-PLA2G4BH0Y9G9 81 aa8.22□□□□□ -1.09
CDK5RAP3-217ENST00000580287 ATP5EP2Q5VTU8 51 aa8.22□□□□□ -1.09
CDK5RAP3-217ENST00000580287 DIRC1Q969H9 104 aa8.21□□□□□ -1.09
CDK5RAP3-217ENST00000580287 TMEM256-PLSCR3K7ERE1 68 aa8.21□□□□□ -1.1
CDK5RAP3-217ENST00000580287 Q6ZR54 194 aa8.21□□□□□ -1.1
CDK5RAP3-217ENST00000580287 C3orf84H3BNL1 204 aa8.2□□□□□ -1.1
CDK5RAP3-217ENST00000580287 ZNF73O43830 326 aaPredicted RBP8.2□□□□□ -1.1
CDK5RAP3-217ENST00000580287 LRCOL1A6NCL2 159 aa8.19□□□□□ -1.1
CDK5RAP3-217ENST00000580287 M0R378 163 aa8.18□□□□□ -1.1
CDK5RAP3-217ENST00000580287 Q6ZQY7 126 aa8.18□□□□□ -1.1
CDK5RAP3-217ENST00000580287 Q5XG85 94 aa8.18□□□□□ -1.1
CDK5RAP3-217ENST00000580287 LAMTOR3Q9UHA4 124 aa8.18□□□□□ -1.1
CDK5RAP3-217ENST00000580287 NKAPP1Q8N9T2 125 aa8.17□□□□□ -1.1
CDK5RAP3-217ENST00000580287 COX7BP24311 80 aa8.17□□□□□ -1.1
CDK5RAP3-217ENST00000580287 UBL5Q9BZL1 73 aa8.16□□□□□ -1.1
CDK5RAP3-217ENST00000580287 C20orf197Q8N268 126 aa8.16□□□□□ -1.1
CDK5RAP3-217ENST00000580287 C1orf134Q5TEV5 83 aa8.15□□□□□ -1.11
CDK5RAP3-217ENST00000580287 SACSQ9NZJ4 4579 aa8.14□□□□□ -1.11
CDK5RAP3-217ENST00000580287 FAM168BA1KXE4 195 aa8.14□□□□□ -1.11
CDK5RAP3-217ENST00000580287 ELOF1P60002 83 aaKnown RBP8.13□□□□□ -1.11
CDK5RAP3-217ENST00000580287 Q6ZQT0 140 aa8.13□□□□□ -1.11
CDK5RAP3-217ENST00000580287 SRRM2Q9UQ35 2752 aaKnown RBP8.13□□□□□ -1.11
CDK5RAP3-217ENST00000580287 A0A087WTM6 91 aa8.13□□□□□ -1.11
CDK5RAP3-217ENST00000580287 IGKV2-24A0A0C4DH68 120 aa8.12□□□□□ -1.11
CDK5RAP3-217ENST00000580287 KMT2CQ8NEZ4 4911 aaKnown RBP8.12□□□□□ -1.11
CDK5RAP3-217ENST00000580287 RPL37AP8A6NKH3 93 aa8.12□□□□□ -1.11
CDK5RAP3-217ENST00000580287 RBM3P98179 157 aaKnown RBP8.12□□□□□ -1.11
CDK5RAP3-217ENST00000580287 A0A0U1RQV1 116 aa8.11□□□□□ -1.11
CDK5RAP3-217ENST00000580287 C7orf33Q8WU49 177 aa8.11□□□□□ -1.11
CDK5RAP3-217ENST00000580287 CHTF8P0CG12 524 aa8.11□□□□□ -1.11
CDK5RAP3-217ENST00000580287 ALMS1Q8TCU4 4167 aa8.11□□□□□ -1.11
CDK5RAP3-217ENST00000580287 DNAH17Q9UFH2 4485 aa8.1□□□□□ -1.11
CDK5RAP3-217ENST00000580287 LOC110117498A0A087WWA1 95 aa8.1□□□□□ -1.11
CDK5RAP3-217ENST00000580287 PMAIP1Q13794 54 aa8.1□□□□□ -1.11
CDK5RAP3-217ENST00000580287 LINC01547P58512 204 aaPredicted RBP8.1□□□□□ -1.11
CDK5RAP3-217ENST00000580287 CNBPP62633 177 aaKnown RBP8.1□□□□□ -1.11
CDK5RAP3-217ENST00000580287 TRAV7A0A075B6U4 112 aa8.09□□□□□ -1.11
CDK5RAP3-217ENST00000580287 A0A096LNI7 61 aa8.09□□□□□ -1.11
CDK5RAP3-217ENST00000580287 FRAS1Q86XX4 4008 aa8.09□□□□□ -1.11
CDK5RAP3-217ENST00000580287 H7BZZ5 65 aa8.09□□□□□ -1.11
CDK5RAP3-217ENST00000580287 RTL8CO15255 209 aa8.09□□□□□ -1.11
CDK5RAP3-217ENST00000580287 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.09□□□□□ -1.11
CDK5RAP3-217ENST00000580287 KRTAP7-1Q8IUC3 87 aa8.09□□□□□ -1.11
CDK5RAP3-217ENST00000580287 HECTD4Q9Y4D8 3996 aa8.08□□□□□ -1.12
CDK5RAP3-217ENST00000580287 TLX1NBP0CAT3 122 aa8.08□□□□□ -1.12
CDK5RAP3-217ENST00000580287 C14orf177Q52M58 125 aa8.08□□□□□ -1.12
CDK5RAP3-217ENST00000580287 TRBV7-6A0A0J9YX20 115 aa8.08□□□□□ -1.12
CDK5RAP3-217ENST00000580287 Q6ZVQ6 151 aa8.08□□□□□ -1.12
CDK5RAP3-217ENST00000580287 EPM2AB3EWF7 344 aa8.07□□□□□ -1.12
CDK5RAP3-217ENST00000580287 BCE1O60756 84 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms