RNA–Protein interactions for RNA: ENST00000580014.1

RNF43-204, Transcript of ring finger protein 43, humanhuman

TSL 3

Gene RNF43, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-204ENST00000580014 IGKV2D-30A0A075B6S6 120 aa4.45□□□□□ -1.7
RNF43-204ENST00000580014 IGLV9-49A0A0B4J1Y8 123 aa4.45□□□□□ -1.7
RNF43-204ENST00000580014 TSTD3H0UI37 97 aa4.45□□□□□ -1.7
RNF43-204ENST00000580014 M0R378 163 aa4.45□□□□□ -1.7
RNF43-204ENST00000580014 IGKV2D-28P01615 120 aa4.45□□□□□ -1.7
RNF43-204ENST00000580014 HSD52Q0P140 79 aa4.45□□□□□ -1.7
RNF43-204ENST00000580014 HIST1H4GQ99525 98 aa4.45□□□□□ -1.7
RNF43-204ENST00000580014 IGLV6-57P01721 117 aa4.44□□□□□ -1.7
RNF43-204ENST00000580014 HNRNPA3P51991 378 aaKnown RBP4.44□□□□□ -1.7
RNF43-204ENST00000580014 PRR3P79522 188 aaKnown RBP4.44□□□□□ -1.7
RNF43-204ENST00000580014 FAM19A5Q7Z5A7 132 aaPredicted RBP4.44□□□□□ -1.7
RNF43-204ENST00000580014 MRPL55Q7Z7F7 128 aaKnown RBP4.44□□□□□ -1.7
RNF43-204ENST00000580014 C7orf33Q8WU49 177 aa4.44□□□□□ -1.7
RNF43-204ENST00000580014 LRP1BQ9NZR2 4599 aa4.44□□□□□ -1.7
RNF43-204ENST00000580014 IGLV1-50A0A075B6I6 118 aa4.43□□□□□ -1.7
RNF43-204ENST00000580014 M0QXV9 152 aa4.43□□□□□ -1.7
RNF43-204ENST00000580014 NPC2P61916 151 aa4.43□□□□□ -1.7
RNF43-204ENST00000580014 CEND1Q8N111 149 aa4.43□□□□□ -1.7
RNF43-204ENST00000580014 DPH3Q96FX2 82 aa4.43□□□□□ -1.7
RNF43-204ENST00000580014 LINC00167Q96N53 147 aa4.43□□□□□ -1.7
RNF43-204ENST00000580014 A0A1B0GWB2 263 aa4.42□□□□□ -1.7
RNF43-204ENST00000580014 DDTP30046 118 aa4.42□□□□□ -1.7
RNF43-204ENST00000580014 PHF5AQ7RTV0 110 aaKnown RBP4.42□□□□□ -1.7
RNF43-204ENST00000580014 KRTAP11-1Q8IUC1 163 aa4.42□□□□□ -1.7
RNF43-204ENST00000580014 LINC00337Q8N6G1 96 aa4.42□□□□□ -1.7
RNF43-204ENST00000580014 NKAPP1Q8N9T2 125 aa4.42□□□□□ -1.7
RNF43-204ENST00000580014 KCNQ1DNQ9H478 68 aa4.42□□□□□ -1.7
RNF43-204ENST00000580014 A0A0B4J2C4 111 aa4.41□□□□□ -1.7
RNF43-204ENST00000580014 CFC1BP0CG36 223 aa4.41□□□□□ -1.7
RNF43-204ENST00000580014 CFC1P0CG37 223 aa4.41□□□□□ -1.7
RNF43-204ENST00000580014 SPRR1AP35321 89 aa4.41□□□□□ -1.7
RNF43-204ENST00000580014 FXYD2P54710 66 aa4.41□□□□□ -1.7
RNF43-204ENST00000580014 CTAG1AP78358 180 aa4.41□□□□□ -1.7
RNF43-204ENST00000580014 BVES-AS1Q5T3Y7 98 aa4.41□□□□□ -1.7
RNF43-204ENST00000580014 SMIM29Q86T20 159 aa4.41□□□□□ -1.7
RNF43-204ENST00000580014 EPPK1P58107 5090 aaKnown RBP4.41□□□□□ -1.7
RNF43-204ENST00000580014 TRAV13-2A0A0B4J235 113 aa4.4□□□□□ -1.71
RNF43-204ENST00000580014 TRBV10-3A0A0K0K1G6 114 aa4.4□□□□□ -1.71
RNF43-204ENST00000580014 KRTAP4-16G5E9R7 235 aaPredicted RBP4.4□□□□□ -1.71
RNF43-204ENST00000580014 NCR3O14931 201 aa4.4□□□□□ -1.71
RNF43-204ENST00000580014 KRTAP10-4P60372 401 aaPredicted RBP4.4□□□□□ -1.71
RNF43-204ENST00000580014 HAMPP81172 84 aa4.4□□□□□ -1.71
RNF43-204ENST00000580014 TMEM126AQ9H061 195 aa4.4□□□□□ -1.71
RNF43-204ENST00000580014 M0R143 59 aa4.39□□□□□ -1.71
RNF43-204ENST00000580014 CBY1Q9Y3M2 126 aa4.39□□□□□ -1.71
RNF43-204ENST00000580014 APOBP04114 4563 aaKnown RBP4.39□□□□□ -1.71
RNF43-204ENST00000580014 RPL37AP8A6NKH3 93 aa4.38□□□□□ -1.71
RNF43-204ENST00000580014 S100A7L2Q5SY68 101 aa4.38□□□□□ -1.71
RNF43-204ENST00000580014 KRTAP13-1Q8IUC0 172 aa4.38□□□□□ -1.71
RNF43-204ENST00000580014 PRO1854Q9UHT4 67 aa4.38□□□□□ -1.71
RNF43-204ENST00000580014 PSORS1C2Q9UIG4 136 aa4.38□□□□□ -1.71
RNF43-204ENST00000580014 TRBV7-6A0A0J9YX20 115 aa4.37□□□□□ -1.71
RNF43-204ENST00000580014 H0Y9J4 135 aa4.37□□□□□ -1.71
RNF43-204ENST00000580014 BCE1O60756 84 aa4.37□□□□□ -1.71
RNF43-204ENST00000580014 RPL28P46779 137 aaKnown RBP4.37□□□□□ -1.71
RNF43-204ENST00000580014 HINT1P49773 126 aaPredicted RBP4.37□□□□□ -1.71
RNF43-204ENST00000580014 UBE2BP63146 152 aa4.37□□□□□ -1.71
RNF43-204ENST00000580014 REG3GQ6UW15 175 aa4.37□□□□□ -1.71
RNF43-204ENST00000580014 TRAV23DV6A0A075B6W5 121 aa4.36□□□□□ -1.71
RNF43-204ENST00000580014 A6NDN8 102 aa4.36□□□□□ -1.71
RNF43-204ENST00000580014 ZNF73O43830 326 aaPredicted RBP4.36□□□□□ -1.71
RNF43-204ENST00000580014 SMR3BP02814 79 aaPredicted RBP4.36□□□□□ -1.71
RNF43-204ENST00000580014 OR13C6PQ8NH95 151 aa4.36□□□□□ -1.71
RNF43-204ENST00000580014 SMIM11BQ8TCY0 68 aa4.36□□□□□ -1.71
RNF43-204ENST00000580014 NHP2Q9NX24 153 aaKnown RBP4.36□□□□□ -1.71
RNF43-204ENST00000580014 HSPG2P98160 4391 aa4.35□□□□□ -1.71
RNF43-204ENST00000580014 BIRC6Q9NR09 4857 aa4.35□□□□□ -1.71
RNF43-204ENST00000580014 RYR1P21817 5038 aa4.35□□□□□ -1.71
RNF43-204ENST00000580014 IGLV7-43P04211 117 aa4.35□□□□□ -1.71
RNF43-204ENST00000580014 RPL13AP40429 203 aaKnown RBP4.35□□□□□ -1.71
RNF43-204ENST00000580014 RPL37AP61513 92 aaKnown RBP4.35□□□□□ -1.71
RNF43-204ENST00000580014 RAB37Q96AX2 223 aa4.35□□□□□ -1.71
RNF43-204ENST00000580014 KIAA1109Q2LD37 5005 aa4.35□□□□□ -1.71
RNF43-204ENST00000580014 K7ERJ3 54 aa4.34□□□□□ -1.71
RNF43-204ENST00000580014 INAFM2P0DMQ5 153 aa4.34□□□□□ -1.71
RNF43-204ENST00000580014 LINC01547P58512 204 aaPredicted RBP4.34□□□□□ -1.71
RNF43-204ENST00000580014 ELOF1P60002 83 aaKnown RBP4.34□□□□□ -1.71
RNF43-204ENST00000580014 C1orf137Q5JT78 98 aa4.34□□□□□ -1.71
RNF43-204ENST00000580014 SNHG12Q9BXW3 62 aa4.34□□□□□ -1.71
RNF43-204ENST00000580014 ZNF861PO60384 105 aa4.33□□□□□ -1.72
RNF43-204ENST00000580014 C6orf99Q4VX62 202 aa4.33□□□□□ -1.72
RNF43-204ENST00000580014 Q5VSD8 79 aa4.33□□□□□ -1.72
RNF43-204ENST00000580014 Q6ZRX8 168 aa4.33□□□□□ -1.72
RNF43-204ENST00000580014 DIRC1Q969H9 104 aa4.33□□□□□ -1.72
RNF43-204ENST00000580014 ETDCA0A1B0GVM5 59 aa4.32□□□□□ -1.72
RNF43-204ENST00000580014 TSPAN13O95857 204 aa4.32□□□□□ -1.72
RNF43-204ENST00000580014 COX7BP24311 80 aa4.32□□□□□ -1.72
RNF43-204ENST00000580014 PCP4L1A6NKN8 68 aa4.31□□□□□ -1.72
RNF43-204ENST00000580014 H0YGX0 51 aa4.31□□□□□ -1.72
RNF43-204ENST00000580014 VAMP3Q15836 100 aa4.31□□□□□ -1.72
RNF43-204ENST00000580014 SPINK6Q6UWN8 80 aa4.31□□□□□ -1.72
RNF43-204ENST00000580014 FAM19A1Q7Z5A9 133 aa4.31□□□□□ -1.72
RNF43-204ENST00000580014 SMCR5Q8TEV8 140 aa4.31□□□□□ -1.72
RNF43-204ENST00000580014 Q9BRP9 147 aa4.31□□□□□ -1.72
RNF43-204ENST00000580014 DHRS4-AS1Q9P1J3 65 aa4.31□□□□□ -1.72
RNF43-204ENST00000580014 H7C2G1 150 aa4.3□□□□□ -1.72
RNF43-204ENST00000580014 TAX1BP3O14907 124 aa4.3□□□□□ -1.72
RNF43-204ENST00000580014 UBE2AP49459 152 aa4.3□□□□□ -1.72
RNF43-204ENST00000580014 PRLHP81277 87 aa4.3□□□□□ -1.72
RNF43-204ENST00000580014 LINC00575Q6W349 94 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms