RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 TRAV23DV6A0A075B6W5 121 aa15.55■□□□□ 0.08
LINC00271-205ENST00000579339 C20orf202A1L168 122 aa15.55■□□□□ 0.08
LINC00271-205ENST00000579339 ERC2-IT1O76042 136 aa15.55■□□□□ 0.08
LINC00271-205ENST00000579339 Q9BRP9 147 aa15.54■□□□□ 0.08
LINC00271-205ENST00000579339 ANKRD39Q53RE8 183 aa15.53■□□□□ 0.08
LINC00271-205ENST00000579339 RETNLBQ9BQ08 111 aa15.53■□□□□ 0.08
LINC00271-205ENST00000579339 Q6ZRX8 168 aa15.52■□□□□ 0.08
LINC00271-205ENST00000579339 SPANXCQ9NY87 97 aa15.51■□□□□ 0.07
LINC00271-205ENST00000579339 GAGE2AQ6NT46 116 aa15.5■□□□□ 0.07
LINC00271-205ENST00000579339 ZNF73O43830 326 aaPredicted RBP15.48■□□□□ 0.07
LINC00271-205ENST00000579339 S100A1P23297 94 aa15.48■□□□□ 0.07
LINC00271-205ENST00000579339 LINC00483Q53H64 154 aa15.47■□□□□ 0.07
LINC00271-205ENST00000579339 OR13C6PQ8NH95 151 aa15.47■□□□□ 0.07
LINC00271-205ENST00000579339 SCGB1D4Q6XE38 83 aa15.46■□□□□ 0.07
LINC00271-205ENST00000579339 HIST3H2BBQ8N257 126 aa15.44■□□□□ 0.06
LINC00271-205ENST00000579339 Q8NBF4 154 aa15.44■□□□□ 0.06
LINC00271-205ENST00000579339 JOSD1Q15040 202 aaPredicted RBP15.42■□□□□ 0.06
LINC00271-205ENST00000579339 PCP2Q8IVA1 136 aa15.42■□□□□ 0.06
LINC00271-205ENST00000579339 HIST1H2BLQ99880 126 aa15.42■□□□□ 0.06
LINC00271-205ENST00000579339 SPANXDQ9BXN6 97 aa15.42■□□□□ 0.06
LINC00271-205ENST00000579339 SPAG11AQ6PDA7 123 aa15.4■□□□□ 0.06
LINC00271-205ENST00000579339 IGLV9-49A0A0B4J1Y8 123 aa15.39■□□□□ 0.05
LINC00271-205ENST00000579339 S100A2P29034 98 aa15.39■□□□□ 0.05
LINC00271-205ENST00000579339 CBY1Q9Y3M2 126 aa15.39■□□□□ 0.05
LINC00271-205ENST00000579339 MOBPQ13875 183 aa15.38■□□□□ 0.05
LINC00271-205ENST00000579339 C4orf48Q5BLP8 95 aa15.38■□□□□ 0.05
LINC00271-205ENST00000579339 ST20-AS1Q8NBB2 130 aa15.38■□□□□ 0.05
LINC00271-205ENST00000579339 HINT1P49773 126 aaPredicted RBP15.37■□□□□ 0.05
LINC00271-205ENST00000579339 AKR1D1P51857 326 aa15.37■□□□□ 0.05
LINC00271-205ENST00000579339 CTAG1AP78358 180 aa15.37■□□□□ 0.05
LINC00271-205ENST00000579339 LINC00518Q8N0U6 118 aa15.35■□□□□ 0.05
LINC00271-205ENST00000579339 IGLV7-46A0A075B6I9 117 aa15.32■□□□□ 0.04
LINC00271-205ENST00000579339 S100A6P06703 90 aa15.32■□□□□ 0.04
LINC00271-205ENST00000579339 MUSTN1Q8IVN3 82 aa15.31■□□□□ 0.04
LINC00271-205ENST00000579339 IFITM1P13164 125 aa15.3■□□□□ 0.04
LINC00271-205ENST00000579339 SNRPEP62304 92 aaKnown RBP15.3■□□□□ 0.04
LINC00271-205ENST00000579339 C6orf99Q4VX62 202 aa15.3■□□□□ 0.04
LINC00271-205ENST00000579339 COPS9Q8WXC6 57 aa15.29■□□□□ 0.04
LINC00271-205ENST00000579339 COX7BP24311 80 aa15.28■□□□□ 0.04
LINC00271-205ENST00000579339 Q6ZVH6 145 aa15.28■□□□□ 0.04
LINC00271-205ENST00000579339 C9orf153Q5TBE3 101 aa15.27■□□□□ 0.04
LINC00271-205ENST00000579339 SSBP3-AS1Q7Z2R9 100 aa15.27■□□□□ 0.04
LINC00271-205ENST00000579339 SPINK1P00995 79 aa15.26■□□□□ 0.03
LINC00271-205ENST00000579339 ELOF1P60002 83 aaKnown RBP15.26■□□□□ 0.03
LINC00271-205ENST00000579339 DHRS4-AS1Q9P1J3 65 aa15.26■□□□□ 0.03
LINC00271-205ENST00000579339 A6NDN8 102 aa15.24■□□□□ 0.03
LINC00271-205ENST00000579339 HSBP1L1C9JCN9 74 aa15.24■□□□□ 0.03
LINC00271-205ENST00000579339 TPRXLQ17RH7 258 aa15.23■□□□□ 0.03
LINC00271-205ENST00000579339 MUC17Q685J3 4493 aa15.23■□□□□ 0.03
LINC00271-205ENST00000579339 C5orf52A6NGY3 159 aa15.22■□□□□ 0.03
LINC00271-205ENST00000579339 MUC2Q02817 5179 aa15.22■□□□□ 0.03
LINC00271-205ENST00000579339 CDIP1Q9H305 208 aa15.21■□□□□ 0.03
LINC00271-205ENST00000579339 SPRR1BP22528 89 aa15.18■□□□□ 0.02
LINC00271-205ENST00000579339 FP248Q71RG6 208 aaPredicted RBP15.18■□□□□ 0.02
LINC00271-205ENST00000579339 SCGB1D1O95968 90 aa15.17■□□□□ 0.02
LINC00271-205ENST00000579339 DEFB105AQ8NG35 78 aa15.15■□□□□ 0.02
LINC00271-205ENST00000579339 TRBV7-6A0A0J9YX20 115 aa15.14■□□□□ 0.01
LINC00271-205ENST00000579339 A0A1B0GWB2 263 aa15.14■□□□□ 0.01
LINC00271-205ENST00000579339 Q8N377 158 aa15.14■□□□□ 0.01
LINC00271-205ENST00000579339 TRAV13-2A0A0B4J235 113 aa15.13■□□□□ 0.01
LINC00271-205ENST00000579339 RPS29P62273 56 aaKnown RBP15.13■□□□□ 0.01
LINC00271-205ENST00000579339 TAL2Q16559 108 aa15.12■□□□□ 0.01
LINC00271-205ENST00000579339 SMIM11BQ8TCY0 68 aa15.12■□□□□ 0.01
LINC00271-205ENST00000579339 SLC25A34Q6PIV7 304 aa15.11■□□□□ 0.01
LINC00271-205ENST00000579339 LAMTOR3Q9UHA4 124 aa15.11■□□□□ 0.01
LINC00271-205ENST00000579339 Q1RN00 199 aa15.09■□□□□ 0.01
LINC00271-205ENST00000579339 A4D1N5 150 aa15.08■□□□□ 0
LINC00271-205ENST00000579339 KRTAP13-3Q3SY46 172 aa15.07■□□□□ 0
LINC00271-205ENST00000579339 SLC25A20O43772 301 aa15.06■□□□□ 0
LINC00271-205ENST00000579339 HRCT1Q6UXD1 115 aa15.06■□□□□ 0
LINC00271-205ENST00000579339 TEX49A0A1B0GTD5 131 aa15.05■□□□□ -0
LINC00271-205ENST00000579339 LINC01547P58512 204 aaPredicted RBP15.03■□□□□ -0
LINC00271-205ENST00000579339 COX8AP10176 69 aa15.02■□□□□ -0
LINC00271-205ENST00000579339 SMIM29Q86T20 159 aa15.01□□□□□ -0.01
LINC00271-205ENST00000579339 C12orf57Q99622 126 aa15.01□□□□□ -0.01
LINC00271-205ENST00000579339 IGLV5-48A0A075B6I7 105 aa15□□□□□ -0.01
LINC00271-205ENST00000579339 HIST1H4GQ99525 98 aa15□□□□□ -0.01
LINC00271-205ENST00000579339 NHP2Q9NX24 153 aaKnown RBP14.97□□□□□ -0.01
LINC00271-205ENST00000579339 C14orf144Q96I85 54 aa14.96□□□□□ -0.01
LINC00271-205ENST00000579339 PRO1933Q9H354 126 aa14.95□□□□□ -0.02
LINC00271-205ENST00000579339 PAM16Q9Y3D7 125 aa14.95□□□□□ -0.02
LINC00271-205ENST00000579339 VAMP3Q15836 100 aa14.94□□□□□ -0.02
LINC00271-205ENST00000579339 FAT4Q6V0I7 4981 aa14.93□□□□□ -0.02
LINC00271-205ENST00000579339 DLEU1O43261 78 aa14.93□□□□□ -0.02
LINC00271-205ENST00000579339 SPATA45Q537H7 98 aa14.93□□□□□ -0.02
LINC00271-205ENST00000579339 LIMD2Q9BT23 127 aa14.93□□□□□ -0.02
LINC00271-205ENST00000579339 A0A0G2JQZ4 141 aa14.92□□□□□ -0.02
LINC00271-205ENST00000579339 LINC00575Q6W349 94 aa14.92□□□□□ -0.02
LINC00271-205ENST00000579339 H7C2G1 150 aa14.89□□□□□ -0.03
LINC00271-205ENST00000579339 A0A0U1RQV1 116 aa14.88□□□□□ -0.03
LINC00271-205ENST00000579339 VAMP8Q9BV40 100 aa14.88□□□□□ -0.03
LINC00271-205ENST00000579339 CD164Q04900 197 aa14.87□□□□□ -0.03
LINC00271-205ENST00000579339 hADV29S1A0JD25 119 aa14.86□□□□□ -0.03
LINC00271-205ENST00000579339 Q6ZQY7 126 aa14.85□□□□□ -0.03
LINC00271-205ENST00000579339 C2orf91Q6ZV80 131 aa14.83□□□□□ -0.04
LINC00271-205ENST00000579339 HIGD1BQ9P298 99 aa14.83□□□□□ -0.04
LINC00271-205ENST00000579339 ASB16-AS1Q495Z4 193 aa14.82□□□□□ -0.04
LINC00271-205ENST00000579339 CFC1BP0CG36 223 aa14.81□□□□□ -0.04
LINC00271-205ENST00000579339 CFC1P0CG37 223 aa14.81□□□□□ -0.04
LINC00271-205ENST00000579339 XP32Q5T750 250 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms