RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 SERF1AO75920 110 aa2.4□□□□□ -2.03
PPP4R1-209ENST00000578329 TRGC2P03986 189 aa2.4□□□□□ -2.03
PPP4R1-209ENST00000578329 SPRR1BP22528 89 aa2.4□□□□□ -2.03
PPP4R1-209ENST00000578329 KRTAP10-6P60371 365 aaPredicted RBP2.4□□□□□ -2.03
PPP4R1-209ENST00000578329 RPS29P62273 56 aaKnown RBP2.4□□□□□ -2.03
PPP4R1-209ENST00000578329 SMIM29Q86T20 159 aa2.4□□□□□ -2.03
PPP4R1-209ENST00000578329 TTTY13Q9BZ97 58 aa2.4□□□□□ -2.03
PPP4R1-209ENST00000578329 A0A0J9YXY3 114 aa2.39□□□□□ -2.03
PPP4R1-209ENST00000578329 COLCA2A8K830 154 aa2.39□□□□□ -2.03
PPP4R1-209ENST00000578329 J3QQQ9 107 aa2.39□□□□□ -2.03
PPP4R1-209ENST00000578329 LEPROTO15243 131 aa2.39□□□□□ -2.03
PPP4R1-209ENST00000578329 DDTP30046 118 aa2.39□□□□□ -2.03
PPP4R1-209ENST00000578329 LINC01547P58512 204 aaPredicted RBP2.39□□□□□ -2.03
PPP4R1-209ENST00000578329 HERV-K104P63124 156 aa2.39□□□□□ -2.03
PPP4R1-209ENST00000578329 SFTA2Q6UW10 78 aa2.39□□□□□ -2.03
PPP4R1-209ENST00000578329 SSBP3-AS1Q7Z2R9 100 aa2.39□□□□□ -2.03
PPP4R1-209ENST00000578329 USH2AO75445 5202 aa2.38□□□□□ -2.03
PPP4R1-209ENST00000578329 MYMXA0A1B0GTQ4 84 aa2.38□□□□□ -2.03
PPP4R1-209ENST00000578329 ETDCA0A1B0GVM5 59 aa2.38□□□□□ -2.03
PPP4R1-209ENST00000578329 NDUFC2O95298 119 aa2.38□□□□□ -2.03
PPP4R1-209ENST00000578329 PCOTHQ58A44 107 aa2.38□□□□□ -2.03
PPP4R1-209ENST00000578329 MEIG1Q5JSS6 88 aa2.38□□□□□ -2.03
PPP4R1-209ENST00000578329 ZNF706Q9Y5V0 76 aaPredicted RBP2.38□□□□□ -2.03
PPP4R1-209ENST00000578329 SSPOA2VEC9 5147 aa2.37□□□□□ -2.03
PPP4R1-209ENST00000578329 H0Y8G0 127 aa2.37□□□□□ -2.03
PPP4R1-209ENST00000578329 SLC25A20O43772 301 aa2.37□□□□□ -2.03
PPP4R1-209ENST00000578329 ZNF73O43830 326 aaPredicted RBP2.37□□□□□ -2.03
PPP4R1-209ENST00000578329 SNAPINO95295 136 aa2.37□□□□□ -2.03
PPP4R1-209ENST00000578329 SEC61BP60468 96 aaKnown RBP2.37□□□□□ -2.03
PPP4R1-209ENST00000578329 NPC2P61916 151 aa2.37□□□□□ -2.03
PPP4R1-209ENST00000578329 LCE5AQ5TCM9 118 aa2.37□□□□□ -2.03
PPP4R1-209ENST00000578329 SVBPQ8N300 66 aa2.37□□□□□ -2.03
PPP4R1-209ENST00000578329 SPANXB1Q9NS25 103 aaPredicted RBP2.37□□□□□ -2.03
PPP4R1-209ENST00000578329 TRAV23DV6A0A075B6W5 121 aa2.36□□□□□ -2.03
PPP4R1-209ENST00000578329 C9orf92A6NGG3 77 aa2.36□□□□□ -2.03
PPP4R1-209ENST00000578329 E9PLD3 99 aa2.36□□□□□ -2.03
PPP4R1-209ENST00000578329 HSBP1O75506 76 aa2.36□□□□□ -2.03
PPP4R1-209ENST00000578329 LEPROTL1O95214 131 aa2.36□□□□□ -2.03
PPP4R1-209ENST00000578329 FABP4P15090 132 aa2.36□□□□□ -2.03
PPP4R1-209ENST00000578329 C1orf195Q5TG92 126 aa2.36□□□□□ -2.03
PPP4R1-209ENST00000578329 SLC7A5P1Q8MH63 180 aa2.36□□□□□ -2.03
PPP4R1-209ENST00000578329 LINC00308Q8TCZ7 52 aa2.36□□□□□ -2.03
PPP4R1-209ENST00000578329 IGLV8-61A0A075B6I0 122 aa2.35□□□□□ -2.03
PPP4R1-209ENST00000578329 DPM2O94777 84 aa2.35□□□□□ -2.03
PPP4R1-209ENST00000578329 IGKCP01834 107 aa2.35□□□□□ -2.03
PPP4R1-209ENST00000578329 PLNP26678 52 aa2.35□□□□□ -2.03
PPP4R1-209ENST00000578329 C4orf48Q5BLP8 95 aa2.35□□□□□ -2.03
PPP4R1-209ENST00000578329 LINC01545Q5VT33 79 aa2.35□□□□□ -2.03
PPP4R1-209ENST00000578329 HRCT1Q6UXD1 115 aa2.35□□□□□ -2.03
PPP4R1-209ENST00000578329 IGLV5-48A0A075B6I7 105 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 SYS1-DBNDD2H3BUS1 97 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 H7C2G1 150 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 HIST1H2BKO60814 126 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 HIST1H2BJP06899 126 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 HIST1H2BOP23527 126 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 HIST1H2BBP33778 126 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 NMUP48645 174 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 HIST1H2BDP58876 126 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 ELOF1P60002 83 aaKnown RBP2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 HIST1H2BCP62807 126 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 HIST2H2BEQ16778 126 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 ANKRD39Q53RE8 183 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 Q5XG85 94 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 HIST1H2BHQ93079 126 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 HIST1H2BNQ99877 126 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 HIST1H2BMQ99879 126 aa2.34□□□□□ -2.03
PPP4R1-209ENST00000578329 C5orf52A6NGY3 159 aa2.33□□□□□ -2.04
PPP4R1-209ENST00000578329 LINC00587B1AMM8 73 aa2.33□□□□□ -2.04
PPP4R1-209ENST00000578329 TIMM17BO60830 172 aa2.33□□□□□ -2.04
PPP4R1-209ENST00000578329 ATP6V1G1O75348 118 aa2.33□□□□□ -2.04
PPP4R1-209ENST00000578329 RPL37P61927 97 aaKnown RBP2.33□□□□□ -2.04
PPP4R1-209ENST00000578329 Q1RN00 199 aa2.33□□□□□ -2.04
PPP4R1-209ENST00000578329 C6orf99Q4VX62 202 aa2.33□□□□□ -2.04
PPP4R1-209ENST00000578329 C9orf153Q5TBE3 101 aa2.33□□□□□ -2.04
PPP4R1-209ENST00000578329 MAP1LC3CQ9BXW4 147 aa2.33□□□□□ -2.04
PPP4R1-209ENST00000578329 SPANXCQ9NY87 97 aa2.33□□□□□ -2.04
PPP4R1-209ENST00000578329 C3orf79P0CE67 100 aa2.32□□□□□ -2.04
PPP4R1-209ENST00000578329 LGALS3P17931 250 aaKnown RBP2.32□□□□□ -2.04
PPP4R1-209ENST00000578329 S100A7L2Q5SY68 101 aa2.32□□□□□ -2.04
PPP4R1-209ENST00000578329 HSPB8Q9UJY1 196 aa2.32□□□□□ -2.04
PPP4R1-209ENST00000578329 FCGBPQ9Y6R7 5405 aaPredicted RBP2.31□□□□□ -2.04
PPP4R1-209ENST00000578329 KRTAP16-1A8MUX0 517 aa2.31□□□□□ -2.04
PPP4R1-209ENST00000578329 COX7BP24311 80 aa2.31□□□□□ -2.04
PPP4R1-209ENST00000578329 CD164Q04900 197 aa2.31□□□□□ -2.04
PPP4R1-209ENST00000578329 COA6Q5JTJ3 125 aaKnown RBP2.31□□□□□ -2.04
PPP4R1-209ENST00000578329 PCP2Q8IVA1 136 aa2.31□□□□□ -2.04
PPP4R1-209ENST00000578329 SPANXDQ9BXN6 97 aa2.31□□□□□ -2.04
PPP4R1-209ENST00000578329 DHRS4-AS1Q9P1J3 65 aa2.31□□□□□ -2.04
PPP4R1-209ENST00000578329 TRBV7-6A0A0J9YX20 115 aa2.3□□□□□ -2.04
PPP4R1-209ENST00000578329 TEX49A0A1B0GTD5 131 aa2.3□□□□□ -2.04
PPP4R1-209ENST00000578329 ZNF815PA8K554 130 aa2.3□□□□□ -2.04
PPP4R1-209ENST00000578329 HERVK_113P61574 105 aa2.3□□□□□ -2.04
PPP4R1-209ENST00000578329 JOSD1Q15040 202 aaPredicted RBP2.3□□□□□ -2.04
PPP4R1-209ENST00000578329 NDUFA5Q16718 116 aa2.3□□□□□ -2.04
PPP4R1-209ENST00000578329 DEFB105AQ8NG35 78 aa2.3□□□□□ -2.04
PPP4R1-209ENST00000578329 CFC1BP0CG36 223 aa2.29□□□□□ -2.04
PPP4R1-209ENST00000578329 PET117Q6UWS5 81 aa2.29□□□□□ -2.04
PPP4R1-209ENST00000578329 MUSTN1Q8IVN3 82 aa2.29□□□□□ -2.04
PPP4R1-209ENST00000578329 LINC00518Q8N0U6 118 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms