RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 HIGD1BQ9P298 99 aa-0.93□□□□□ -2.56
SNRPD1-202ENST00000577906 ADAMTS12P58397 1594 aa-0.93□□□□□ -2.56
SNRPD1-202ENST00000577906 PTPN23Q9H3S7 1636 aa-0.93□□□□□ -2.56
SNRPD1-202ENST00000577906 MT1AP04731 61 aa-0.94□□□□□ -2.56
SNRPD1-202ENST00000577906 WFDC13Q8IUB5 93 aa-0.94□□□□□ -2.56
SNRPD1-202ENST00000577906 ACACAQ13085 2346 aa-0.94□□□□□ -2.56
SNRPD1-202ENST00000577906 AKAP13Q12802 2813 aa-0.94□□□□□ -2.56
SNRPD1-202ENST00000577906 UBE2D4Q9Y2X8 147 aa-0.95□□□□□ -2.56
SNRPD1-202ENST00000577906 PKHD1L1Q86WI1 4243 aa-0.95□□□□□ -2.56
SNRPD1-202ENST00000577906 MUC17Q685J3 4493 aa-0.95□□□□□ -2.56
SNRPD1-202ENST00000577906 NBPF19A0A087WUL8 3843 aa-0.95□□□□□ -2.56
SNRPD1-202ENST00000577906 PKD1P98161 4303 aa-0.96□□□□□ -2.56
SNRPD1-202ENST00000577906 ANKRD11Q6UB99 2663 aaPredicted RBP-0.96□□□□□ -2.56
SNRPD1-202ENST00000577906 H3BNG1 76 aa-0.96□□□□□ -2.56
SNRPD1-202ENST00000577906 PRRC2CQ9Y520 2896 aaKnown RBP-0.96□□□□□ -2.56
SNRPD1-202ENST00000577906 MGAM2Q2M2H8 2515 aa-0.96□□□□□ -2.56
SNRPD1-202ENST00000577906 DSPP15924 2871 aaKnown RBP-0.97□□□□□ -2.56
SNRPD1-202ENST00000577906 TNRC18O15417 2968 aaPredicted RBP-0.97□□□□□ -2.56
SNRPD1-202ENST00000577906 NBEAL2Q6ZNJ1 2754 aa-0.97□□□□□ -2.56
SNRPD1-202ENST00000577906 TROQ12816 1431 aaPredicted RBP-0.98□□□□□ -2.57
SNRPD1-202ENST00000577906 EPRSP07814 1512 aaKnown RBP-0.98□□□□□ -2.57
SNRPD1-202ENST00000577906 FAT3Q8TDW7 4589 aa-0.98□□□□□ -2.57
SNRPD1-202ENST00000577906 DNAH3Q8TD57 4116 aa-0.98□□□□□ -2.57
SNRPD1-202ENST00000577906 ABCC10Q5T3U5 1492 aa-0.99□□□□□ -2.57
SNRPD1-202ENST00000577906 MAGI2Q86UL8 1455 aa-0.99□□□□□ -2.57
SNRPD1-202ENST00000577906 TRANK1O15050 2925 aa-0.99□□□□□ -2.57
SNRPD1-202ENST00000577906 MTORP42345 2549 aa-0.99□□□□□ -2.57
SNRPD1-202ENST00000577906 SNHG12Q9BXW3 62 aa-0.99□□□□□ -2.57
SNRPD1-202ENST00000577906 LAMA1P25391 3075 aa-0.99□□□□□ -2.57
SNRPD1-202ENST00000577906 PDE4DIPQ5VU43 2346 aa-0.99□□□□□ -2.57
SNRPD1-202ENST00000577906 PKD1L2Q7Z442 2459 aa-0.99□□□□□ -2.57
SNRPD1-202ENST00000577906 LAMA2P24043 3122 aaKnown RBP-1□□□□□ -2.57
SNRPD1-202ENST00000577906 COX7BP24311 80 aa-1□□□□□ -2.57
SNRPD1-202ENST00000577906 USP9XQ93008 2570 aaPredicted RBP-1□□□□□ -2.57
SNRPD1-202ENST00000577906 ANKRD50Q9ULJ7 1429 aa-1□□□□□ -2.57
SNRPD1-202ENST00000577906 TEX15Q9BXT5 2789 aa-1.01□□□□□ -2.57
SNRPD1-202ENST00000577906 NIPBLQ6KC79 2804 aaeCLIP-1.01□□□□□ -2.57
SNRPD1-202ENST00000577906 FANCAO15360 1455 aa-1.01□□□□□ -2.57
SNRPD1-202ENST00000577906 CICQ96RK0 1608 aaPredicted RBP-1.01□□□□□ -2.57
SNRPD1-202ENST00000577906 LRRK2Q5S007 2527 aa-1.01□□□□□ -2.57
SNRPD1-202ENST00000577906 ZZEF1O43149 2961 aa-1.02□□□□□ -2.57
SNRPD1-202ENST00000577906 HMGN2P05204 90 aaKnown RBP-1.02□□□□□ -2.57
SNRPD1-202ENST00000577906 CLTCQ00610 1675 aaKnown RBP-1.02□□□□□ -2.57
SNRPD1-202ENST00000577906 C20orf78Q9BR46 151 aa-1.02□□□□□ -2.57
SNRPD1-202ENST00000577906 CRYBG1Q9Y4K1 1723 aa-1.02□□□□□ -2.57
SNRPD1-202ENST00000577906 VPS13DQ5THJ4 4388 aa-1.02□□□□□ -2.57
SNRPD1-202ENST00000577906 COL14A1Q05707 1796 aaKnown RBP-1.03□□□□□ -2.57
SNRPD1-202ENST00000577906 BIRC6Q9NR09 4857 aa-1.03□□□□□ -2.57
SNRPD1-202ENST00000577906 DNAH9Q9NYC9 4486 aa-1.03□□□□□ -2.57
SNRPD1-202ENST00000577906 ATP10BO94823 1461 aa-1.03□□□□□ -2.57
SNRPD1-202ENST00000577906 VPS8Q8N3P4 1428 aa-1.03□□□□□ -2.57
SNRPD1-202ENST00000577906 UTP20O75691 2785 aaKnown RBP-1.03□□□□□ -2.57
SNRPD1-202ENST00000577906 C9orf92A6NGG3 77 aa-1.03□□□□□ -2.57
SNRPD1-202ENST00000577906 NMSQ5H8A3 153 aa-1.03□□□□□ -2.57
SNRPD1-202ENST00000577906 CEP290O15078 2479 aa-1.03□□□□□ -2.57
SNRPD1-202ENST00000577906 COL6A5A8TX70 2615 aa-1.03□□□□□ -2.58
SNRPD1-202ENST00000577906 RIF1Q5UIP0 2472 aaKnown RBP-1.04□□□□□ -2.58
SNRPD1-202ENST00000577906 DMXL1Q9Y485 3027 aa-1.04□□□□□ -2.58
SNRPD1-202ENST00000577906 GYPAP02724 150 aa-1.04□□□□□ -2.58
SNRPD1-202ENST00000577906 KIF20BQ96Q89 1820 aa-1.04□□□□□ -2.58
SNRPD1-202ENST00000577906 FAM186AA6NE01 2351 aa-1.04□□□□□ -2.58
SNRPD1-202ENST00000577906 GCN1Q92616 2671 aaKnown RBP-1.04□□□□□ -2.58
SNRPD1-202ENST00000577906 BCORQ6W2J9 1755 aa-1.05□□□□□ -2.58
SNRPD1-202ENST00000577906 S100A8P05109 93 aa-1.05□□□□□ -2.58
SNRPD1-202ENST00000577906 PKIAP61925 76 aa-1.05□□□□□ -2.58
SNRPD1-202ENST00000577906 DEFA5Q01523 94 aa-1.05□□□□□ -2.58
SNRPD1-202ENST00000577906 AKAP9Q99996 3911 aa-1.05□□□□□ -2.58
SNRPD1-202ENST00000577906 DNHD1Q96M86 4753 aa-1.05□□□□□ -2.58
SNRPD1-202ENST00000577906 CUBNO60494 3623 aa-1.06□□□□□ -2.58
SNRPD1-202ENST00000577906 SMIM11AP58511 58 aa-1.06□□□□□ -2.58
SNRPD1-202ENST00000577906 CCDC168Q8NDH2 2452 aa-1.06□□□□□ -2.58
SNRPD1-202ENST00000577906 WDR87Q6ZQQ6 2873 aa-1.07□□□□□ -2.58
SNRPD1-202ENST00000577906 A0A1B0GUT8 65 aa-1.07□□□□□ -2.58
SNRPD1-202ENST00000577906 PEA15Q15121 130 aa-1.07□□□□□ -2.58
SNRPD1-202ENST00000577906 PLGLAQ15195 96 aa-1.07□□□□□ -2.58
SNRPD1-202ENST00000577906 COX6B2Q6YFQ2 88 aa-1.07□□□□□ -2.58
SNRPD1-202ENST00000577906 LYSTQ99698 3801 aa-1.08□□□□□ -2.58
SNRPD1-202ENST00000577906 MYH4Q9Y623 1939 aa-1.08□□□□□ -2.58
SNRPD1-202ENST00000577906 IQCF6A8MYZ5 107 aa-1.08□□□□□ -2.58
SNRPD1-202ENST00000577906 NDUFA3O95167 84 aa-1.08□□□□□ -2.58
SNRPD1-202ENST00000577906 GAFA1Q96PS6 74 aa-1.08□□□□□ -2.58
SNRPD1-202ENST00000577906 NEXMIFQ5QGS0 1516 aa-1.09□□□□□ -2.58
SNRPD1-202ENST00000577906 LAMA3Q16787 3333 aa-1.09□□□□□ -2.58
SNRPD1-202ENST00000577906 NBEAQ8NFP9 2946 aa-1.09□□□□□ -2.58
SNRPD1-202ENST00000577906 UBR3Q6ZT12 1888 aa-1.09□□□□□ -2.58
SNRPD1-202ENST00000577906 LRRC7Q96NW7 1537 aa-1.1□□□□□ -2.59
SNRPD1-202ENST00000577906 PLECQ15149 4684 aaKnown RBP-1.1□□□□□ -2.59
SNRPD1-202ENST00000577906 KALRNO60229 2985 aa-1.11□□□□□ -2.59
SNRPD1-202ENST00000577906 RGPD2P0DJD1 1756 aa-1.11□□□□□ -2.59
SNRPD1-202ENST00000577906 ATP7BP35670 1465 aa-1.11□□□□□ -2.59
SNRPD1-202ENST00000577906 DNAH2Q9P225 4427 aa-1.11□□□□□ -2.59
SNRPD1-202ENST00000577906 QSER1Q2KHR3 1735 aa-1.11□□□□□ -2.59
SNRPD1-202ENST00000577906 RPL38P63173 70 aaKnown RBP-1.11□□□□□ -2.59
SNRPD1-202ENST00000577906 MT1HP80294 61 aa-1.11□□□□□ -2.59
SNRPD1-202ENST00000577906 VPS13BQ7Z7G8 4022 aa-1.12□□□□□ -2.59
SNRPD1-202ENST00000577906 PKD1L3Q7Z443 1732 aa-1.12□□□□□ -2.59
SNRPD1-202ENST00000577906 K7EP34 96 aa-1.12□□□□□ -2.59
SNRPD1-202ENST00000577906 ALKQ9UM73 1620 aa-1.12□□□□□ -2.59
SNRPD1-202ENST00000577906 ACACBO00763 2458 aa-1.12□□□□□ -2.59
SNRPD1-202ENST00000577906 LRRC9Q6ZRR7 1453 aa-1.12□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms