RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 SRRM2Q9UQ35 2752 aaKnown RBP6.57□□□□□ -1.36
SS18-207ENST00000577636 LRCOL1A6NCL2 159 aa6.56□□□□□ -1.36
SS18-207ENST00000577636 LINC00528Q8N1L1 170 aa6.56□□□□□ -1.36
SS18-207ENST00000577636 Q8N814 137 aa6.56□□□□□ -1.36
SS18-207ENST00000577636 NKAPP1Q8N9T2 125 aa6.56□□□□□ -1.36
SS18-207ENST00000577636 M0R378 163 aa6.55□□□□□ -1.36
SS18-207ENST00000577636 CNBPP62633 177 aaKnown RBP6.55□□□□□ -1.36
SS18-207ENST00000577636 PRR3P79522 188 aaKnown RBP6.55□□□□□ -1.36
SS18-207ENST00000577636 Q6ZRP5 223 aa6.55□□□□□ -1.36
SS18-207ENST00000577636 SMIM11BQ8TCY0 68 aa6.55□□□□□ -1.36
SS18-207ENST00000577636 LST1O00453 97 aa6.54□□□□□ -1.36
SS18-207ENST00000577636 PLA2G2DQ9UNK4 145 aa6.54□□□□□ -1.36
SS18-207ENST00000577636 C9JAW5 83 aa6.53□□□□□ -1.36
SS18-207ENST00000577636 DNAL4O96015 105 aa6.53□□□□□ -1.36
SS18-207ENST00000577636 GAGE2BQ13066 116 aa6.53□□□□□ -1.36
SS18-207ENST00000577636 LINC01620Q4KN68 170 aa6.53□□□□□ -1.36
SS18-207ENST00000577636 C4orf48Q5BLP8 95 aa6.53□□□□□ -1.36
SS18-207ENST00000577636 CLEC2BQ92478 149 aa6.53□□□□□ -1.36
SS18-207ENST00000577636 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.52□□□□□ -1.37
SS18-207ENST00000577636 IGLV6-57P01721 117 aa6.52□□□□□ -1.37
SS18-207ENST00000577636 TRACP01848 142 aa6.52□□□□□ -1.37
SS18-207ENST00000577636 SLPIP03973 132 aa6.52□□□□□ -1.37
SS18-207ENST00000577636 VPREB1P12018 145 aa6.52□□□□□ -1.37
SS18-207ENST00000577636 TRAV23DV6A0A075B6W5 121 aa6.51□□□□□ -1.37
SS18-207ENST00000577636 SLC25A20O43772 301 aa6.51□□□□□ -1.37
SS18-207ENST00000577636 WFDC2Q14508 124 aa6.51□□□□□ -1.37
SS18-207ENST00000577636 TRBV10-3A0A0K0K1G6 114 aa6.5□□□□□ -1.37
SS18-207ENST00000577636 C9orf129Q5T035 196 aaKnown RBP6.5□□□□□ -1.37
SS18-207ENST00000577636 A0A1B0GX51 115 aa6.49□□□□□ -1.37
SS18-207ENST00000577636 H3BT86 120 aa6.49□□□□□ -1.37
SS18-207ENST00000577636 J3QR89 54 aa6.49□□□□□ -1.37
SS18-207ENST00000577636 K7ERU9 68 aa6.49□□□□□ -1.37
SS18-207ENST00000577636 M0QXV9 152 aa6.49□□□□□ -1.37
SS18-207ENST00000577636 C6orf99Q4VX62 202 aa6.49□□□□□ -1.37
SS18-207ENST00000577636 ANKRD29Q8N6D5 301 aa6.49□□□□□ -1.37
SS18-207ENST00000577636 Q8NDZ9 215 aa6.49□□□□□ -1.37
SS18-207ENST00000577636 DIRC1Q969H9 104 aa6.49□□□□□ -1.37
SS18-207ENST00000577636 LINC00474Q9P2X8 69 aa6.49□□□□□ -1.37
SS18-207ENST00000577636 DNAH8Q96JB1 4490 aa6.48□□□□□ -1.37
SS18-207ENST00000577636 IGLV5-37A0A075B6J1 123 aa6.48□□□□□ -1.37
SS18-207ENST00000577636 ZNF73O43830 326 aaPredicted RBP6.48□□□□□ -1.37
SS18-207ENST00000577636 OXTP01178 125 aa6.48□□□□□ -1.37
SS18-207ENST00000577636 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
SS18-207ENST00000577636 SCXQ7RTU7 201 aa6.48□□□□□ -1.37
SS18-207ENST00000577636 MTURNQ8N3F0 131 aa6.48□□□□□ -1.37
SS18-207ENST00000577636 PRO0461Q9UI25 63 aa6.48□□□□□ -1.37
SS18-207ENST00000577636 TRBV7-6A0A0J9YX20 115 aa6.47□□□□□ -1.37
SS18-207ENST00000577636 GHRHP01286 108 aa6.47□□□□□ -1.37
SS18-207ENST00000577636 COX7BP24311 80 aa6.47□□□□□ -1.37
SS18-207ENST00000577636 Q6ZSA8 131 aa6.47□□□□□ -1.37
SS18-207ENST00000577636 C9orf163Q8N9P6 203 aa6.47□□□□□ -1.37
SS18-207ENST00000577636 IGKV2-24A0A0C4DH68 120 aa6.46□□□□□ -1.38
SS18-207ENST00000577636 ETDBQ3ZM63 59 aa6.46□□□□□ -1.38
SS18-207ENST00000577636 FAM19A5Q7Z5A7 132 aaPredicted RBP6.46□□□□□ -1.38
SS18-207ENST00000577636 TEN1Q86WV5 123 aa6.46□□□□□ -1.38
SS18-207ENST00000577636 C7orf33Q8WU49 177 aa6.46□□□□□ -1.38
SS18-207ENST00000577636 LRP1Q07954 4544 aaKnown RBP6.46□□□□□ -1.38
SS18-207ENST00000577636 A0A087WYN8 130 aa6.45□□□□□ -1.38
SS18-207ENST00000577636 A0A096LNI7 61 aa6.45□□□□□ -1.38
SS18-207ENST00000577636 OCIAD2Q56VL3 154 aa6.45□□□□□ -1.38
SS18-207ENST00000577636 MRPL55Q7Z7F7 128 aaKnown RBP6.45□□□□□ -1.38
SS18-207ENST00000577636 DPH3Q96FX2 82 aa6.45□□□□□ -1.38
SS18-207ENST00000577636 HMCN2Q8NDA2 5059 aa6.44□□□□□ -1.38
SS18-207ENST00000577636 hADV29S1A0JD25 119 aa6.44□□□□□ -1.38
SS18-207ENST00000577636 H3BQ85 93 aa6.44□□□□□ -1.38
SS18-207ENST00000577636 PRYO14603 147 aa6.44□□□□□ -1.38
SS18-207ENST00000577636 BAALC-AS2P0C853 105 aa6.44□□□□□ -1.38
SS18-207ENST00000577636 PPDPFLQ8WWR9 84 aa6.44□□□□□ -1.38
SS18-207ENST00000577636 FAM218AQ96MZ4 157 aa6.44□□□□□ -1.38
SS18-207ENST00000577636 ORMDL1Q9P0S3 153 aa6.44□□□□□ -1.38
SS18-207ENST00000577636 C22orf24Q9Y442 160 aa6.44□□□□□ -1.38
SS18-207ENST00000577636 FAM168BA1KXE4 195 aa6.43□□□□□ -1.38
SS18-207ENST00000577636 LINC00575Q6W349 94 aa6.43□□□□□ -1.38
SS18-207ENST00000577636 CIRBP-AS1Q8TBR5 109 aa6.43□□□□□ -1.38
SS18-207ENST00000577636 LINC01600Q96MT4 127 aa6.43□□□□□ -1.38
SS18-207ENST00000577636 KCNQ1DNQ9H478 68 aa6.43□□□□□ -1.38
SS18-207ENST00000577636 ETDCA0A1B0GVM5 59 aa6.42□□□□□ -1.38
SS18-207ENST00000577636 ELOF1P60002 83 aaKnown RBP6.42□□□□□ -1.38
SS18-207ENST00000577636 KRTAP10-4P60372 401 aaPredicted RBP6.42□□□□□ -1.38
SS18-207ENST00000577636 LINC00167Q96N53 147 aa6.42□□□□□ -1.38
SS18-207ENST00000577636 IGLV1-50A0A075B6I6 118 aa6.41□□□□□ -1.38
SS18-207ENST00000577636 RPL37AP8A6NKH3 93 aa6.41□□□□□ -1.38
SS18-207ENST00000577636 RPL37AP61513 92 aaKnown RBP6.41□□□□□ -1.38
SS18-207ENST00000577636 SDIM1Q6ZPB5 146 aa6.41□□□□□ -1.38
SS18-207ENST00000577636 FAT3Q8TDW7 4589 aa6.41□□□□□ -1.38
SS18-207ENST00000577636 TMEM256-PLSCR3K7ERE1 68 aa6.4□□□□□ -1.38
SS18-207ENST00000577636 UBE2BP63146 152 aa6.4□□□□□ -1.38
SS18-207ENST00000577636 REG3GQ6UW15 175 aa6.39□□□□□ -1.39
SS18-207ENST00000577636 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.39□□□□□ -1.39
SS18-207ENST00000577636 DHRS4-AS1Q9P1J3 65 aa6.39□□□□□ -1.39
SS18-207ENST00000577636 TEX49A0A1B0GTD5 131 aa6.37□□□□□ -1.39
SS18-207ENST00000577636 A0A1W2PNN7 141 aa6.37□□□□□ -1.39
SS18-207ENST00000577636 CHTF8P0CG12 524 aa6.37□□□□□ -1.39
SS18-207ENST00000577636 JMJD7-PLA2G4BH0Y9G9 81 aa6.36□□□□□ -1.39
SS18-207ENST00000577636 Q6ZQY7 126 aa6.36□□□□□ -1.39
SS18-207ENST00000577636 SPACA4Q8TDM5 124 aa6.36□□□□□ -1.39
SS18-207ENST00000577636 VPS25Q9BRG1 176 aa6.36□□□□□ -1.39
SS18-207ENST00000577636 Q6ZRX8 168 aa6.35□□□□□ -1.39
SS18-207ENST00000577636 KRTAP7-1Q8IUC3 87 aa6.35□□□□□ -1.39
SS18-207ENST00000577636 LAMTOR3Q9UHA4 124 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 123.8 ms