RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 GEMIN7Q9H840 131 aaKnown RBP5.68□□□□□ -1.5
NPLOC4-220ENST00000576940 H3BRM9 83 aa5.67□□□□□ -1.5
NPLOC4-220ENST00000576940 M0R143 59 aa5.67□□□□□ -1.5
NPLOC4-220ENST00000576940 LEPROTO15243 131 aa5.67□□□□□ -1.5
NPLOC4-220ENST00000576940 COX7B2Q8TF08 81 aa5.67□□□□□ -1.5
NPLOC4-220ENST00000576940 SMIM1B2RUZ4 78 aa5.66□□□□□ -1.5
NPLOC4-220ENST00000576940 M0R378 163 aa5.66□□□□□ -1.5
NPLOC4-220ENST00000576940 PCP2Q8IVA1 136 aa5.66□□□□□ -1.5
NPLOC4-220ENST00000576940 MYMXA0A1B0GTQ4 84 aa5.65□□□□□ -1.5
NPLOC4-220ENST00000576940 J3QQQ9 107 aa5.65□□□□□ -1.5
NPLOC4-220ENST00000576940 HSD52Q0P140 79 aa5.65□□□□□ -1.5
NPLOC4-220ENST00000576940 SFTA2Q6UW10 78 aa5.65□□□□□ -1.5
NPLOC4-220ENST00000576940 Q8NBF4 154 aa5.65□□□□□ -1.5
NPLOC4-220ENST00000576940 HIGD2AQ9BW72 106 aa5.65□□□□□ -1.5
NPLOC4-220ENST00000576940 SNHG12Q9BXW3 62 aa5.65□□□□□ -1.5
NPLOC4-220ENST00000576940 SPANXB1Q9NS25 103 aaPredicted RBP5.65□□□□□ -1.5
NPLOC4-220ENST00000576940 TIMM17BO60830 172 aa5.64□□□□□ -1.51
NPLOC4-220ENST00000576940 PFN2P35080 140 aa5.64□□□□□ -1.51
NPLOC4-220ENST00000576940 MT1HP80294 61 aa5.64□□□□□ -1.51
NPLOC4-220ENST00000576940 KRTAP19-2Q3LHN2 52 aa5.64□□□□□ -1.51
NPLOC4-220ENST00000576940 TMEM170BQ5T4T1 132 aa5.64□□□□□ -1.51
NPLOC4-220ENST00000576940 SPRR4Q96PI1 79 aa5.64□□□□□ -1.51
NPLOC4-220ENST00000576940 A0A0J9YXY3 114 aa5.63□□□□□ -1.51
NPLOC4-220ENST00000576940 SPINK8P0C7L1 97 aa5.63□□□□□ -1.51
NPLOC4-220ENST00000576940 VPREB1P12018 145 aa5.63□□□□□ -1.51
NPLOC4-220ENST00000576940 Q6ZVH6 145 aa5.63□□□□□ -1.51
NPLOC4-220ENST00000576940 TSPEAR-AS2P59090 65 aa5.62□□□□□ -1.51
NPLOC4-220ENST00000576940 BVES-AS1Q5T3Y7 98 aa5.62□□□□□ -1.51
NPLOC4-220ENST00000576940 Q8NDZ9 215 aa5.62□□□□□ -1.51
NPLOC4-220ENST00000576940 A0A1B0GWB2 263 aa5.61□□□□□ -1.51
NPLOC4-220ENST00000576940 ZNF815PA8K554 130 aa5.61□□□□□ -1.51
NPLOC4-220ENST00000576940 LGALS3P17931 250 aaKnown RBP5.61□□□□□ -1.51
NPLOC4-220ENST00000576940 HERV-K104P63124 156 aa5.61□□□□□ -1.51
NPLOC4-220ENST00000576940 COL5A1-AS1Q5SY13 56 aa5.61□□□□□ -1.51
NPLOC4-220ENST00000576940 SND1-IT1Q9HBX3 110 aa5.61□□□□□ -1.51
NPLOC4-220ENST00000576940 SPINK1P00995 79 aa5.6□□□□□ -1.51
NPLOC4-220ENST00000576940 XP32Q5T750 250 aa5.6□□□□□ -1.51
NPLOC4-220ENST00000576940 ZNF625Q96I27 306 aaPredicted RBP5.6□□□□□ -1.51
NPLOC4-220ENST00000576940 LORP23490 312 aaPredicted RBP5.59□□□□□ -1.51
NPLOC4-220ENST00000576940 RPL24P83731 157 aaKnown RBP5.59□□□□□ -1.51
NPLOC4-220ENST00000576940 CEND1Q8N111 149 aa5.59□□□□□ -1.51
NPLOC4-220ENST00000576940 SPANXDQ9BXN6 97 aa5.59□□□□□ -1.51
NPLOC4-220ENST00000576940 TTTY13Q9BZ97 58 aa5.59□□□□□ -1.51
NPLOC4-220ENST00000576940 SPANXCQ9NY87 97 aa5.59□□□□□ -1.51
NPLOC4-220ENST00000576940 NDUFA12Q9UI09 145 aa5.59□□□□□ -1.51
NPLOC4-220ENST00000576940 A6NDN8 102 aa5.58□□□□□ -1.52
NPLOC4-220ENST00000576940 CFC1BP0CG36 223 aa5.58□□□□□ -1.52
NPLOC4-220ENST00000576940 IFITM1P13164 125 aa5.58□□□□□ -1.52
NPLOC4-220ENST00000576940 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
NPLOC4-220ENST00000576940 SMCR5Q8TEV8 140 aa5.58□□□□□ -1.52
NPLOC4-220ENST00000576940 LITAFQ99732 161 aa5.58□□□□□ -1.52
NPLOC4-220ENST00000576940 TMEM238LA0A1B0GVL6 79 aa5.57□□□□□ -1.52
NPLOC4-220ENST00000576940 A6NJY4 79 aa5.57□□□□□ -1.52
NPLOC4-220ENST00000576940 SCGB1D4Q6XE38 83 aa5.57□□□□□ -1.52
NPLOC4-220ENST00000576940 Q8N377 158 aa5.57□□□□□ -1.52
NPLOC4-220ENST00000576940 ERG28Q9UKR5 140 aa5.57□□□□□ -1.52
NPLOC4-220ENST00000576940 ZNF706Q9Y5V0 76 aaPredicted RBP5.57□□□□□ -1.52
NPLOC4-220ENST00000576940 HINT1P49773 126 aaPredicted RBP5.56□□□□□ -1.52
NPLOC4-220ENST00000576940 COPS9Q8WXC6 57 aa5.56□□□□□ -1.52
NPLOC4-220ENST00000576940 LOC107984156A0A0G2JMH3 177 aa5.55□□□□□ -1.52
NPLOC4-220ENST00000576940 ARL17AQ8IVW1 177 aa5.55□□□□□ -1.52
NPLOC4-220ENST00000576940 HIST1H4GQ99525 98 aa5.55□□□□□ -1.52
NPLOC4-220ENST00000576940 IGLV8-61A0A075B6I0 122 aa5.54□□□□□ -1.52
NPLOC4-220ENST00000576940 IGLV9-49A0A0B4J1Y8 123 aa5.54□□□□□ -1.52
NPLOC4-220ENST00000576940 FXYD2P54710 66 aa5.54□□□□□ -1.52
NPLOC4-220ENST00000576940 COX17Q14061 63 aa5.54□□□□□ -1.52
NPLOC4-220ENST00000576940 PCOTHQ58A44 107 aa5.54□□□□□ -1.52
NPLOC4-220ENST00000576940 GAGE2AQ6NT46 116 aa5.54□□□□□ -1.52
NPLOC4-220ENST00000576940 A0A0B4J2C4 111 aa5.53□□□□□ -1.52
NPLOC4-220ENST00000576940 KRTAP9-7A8MTY7 169 aa5.53□□□□□ -1.52
NPLOC4-220ENST00000576940 TAX1BP3O14907 124 aa5.53□□□□□ -1.52
NPLOC4-220ENST00000576940 SLC25A20O43772 301 aa5.53□□□□□ -1.52
NPLOC4-220ENST00000576940 MOBPQ13875 183 aa5.53□□□□□ -1.52
NPLOC4-220ENST00000576940 FLGP20930 4061 aaPredicted RBP5.52□□□□□ -1.53
NPLOC4-220ENST00000576940 A0A0U1RRA0 63 aa5.52□□□□□ -1.53
NPLOC4-220ENST00000576940 LINC00483Q53H64 154 aa5.52□□□□□ -1.53
NPLOC4-220ENST00000576940 SSBP3-AS1Q7Z2R9 100 aa5.52□□□□□ -1.53
NPLOC4-220ENST00000576940 C9orf118A6NHY6 69 aa5.51□□□□□ -1.53
NPLOC4-220ENST00000576940 M0R2T5 61 aa5.51□□□□□ -1.53
NPLOC4-220ENST00000576940 SMIM13P0DJ93 91 aa5.51□□□□□ -1.53
NPLOC4-220ENST00000576940 RPS29P62273 56 aaKnown RBP5.51□□□□□ -1.53
NPLOC4-220ENST00000576940 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.5□□□□□ -1.53
NPLOC4-220ENST00000576940 KRTAP4-16G5E9R7 235 aaPredicted RBP5.5□□□□□ -1.53
NPLOC4-220ENST00000576940 ERC2-IT1O76042 136 aa5.5□□□□□ -1.53
NPLOC4-220ENST00000576940 SPRR1AP35321 89 aa5.5□□□□□ -1.53
NPLOC4-220ENST00000576940 LINC00158P58513 81 aa5.5□□□□□ -1.53
NPLOC4-220ENST00000576940 BATFQ16520 125 aa5.5□□□□□ -1.53
NPLOC4-220ENST00000576940 ADAMTSL4-AS1Q5T5F5 129 aa5.5□□□□□ -1.53
NPLOC4-220ENST00000576940 SSPOA2VEC9 5147 aa5.49□□□□□ -1.53
NPLOC4-220ENST00000576940 PRYO14603 147 aa5.49□□□□□ -1.53
NPLOC4-220ENST00000576940 MEIG1Q5JSS6 88 aa5.49□□□□□ -1.53
NPLOC4-220ENST00000576940 LINC00308Q8TCZ7 52 aa5.49□□□□□ -1.53
NPLOC4-220ENST00000576940 KCNQ1DNQ9H478 68 aa5.49□□□□□ -1.53
NPLOC4-220ENST00000576940 ETDCA0A1B0GVM5 59 aa5.48□□□□□ -1.53
NPLOC4-220ENST00000576940 A4D1N5 150 aa5.48□□□□□ -1.53
NPLOC4-220ENST00000576940 NCR3O14931 201 aa5.48□□□□□ -1.53
NPLOC4-220ENST00000576940 MUSTN1Q8IVN3 82 aa5.48□□□□□ -1.53
NPLOC4-220ENST00000576940 NHP2Q9NX24 153 aaKnown RBP5.48□□□□□ -1.53
NPLOC4-220ENST00000576940 A0A1B0GV90 55 aa5.47□□□□□ -1.53
NPLOC4-220ENST00000576940 C9orf92A6NGG3 77 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms