RNA–Protein interactions for RNA: ENST00000574163.1

NDE1-210, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 352 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-210ENST00000574163 DDTP30046 118 aa5.83□□□□□ -1.48
NDE1-210ENST00000574163 FAM229BQ4G0N7 80 aa5.83□□□□□ -1.48
NDE1-210ENST00000574163 ATOH7Q8N100 152 aa5.83□□□□□ -1.48
NDE1-210ENST00000574163 LINC00308Q8TCZ7 52 aa5.83□□□□□ -1.48
NDE1-210ENST00000574163 COPS9Q8WXC6 57 aa5.83□□□□□ -1.48
NDE1-210ENST00000574163 SPANXDQ9BXN6 97 aa5.83□□□□□ -1.48
NDE1-210ENST00000574163 TTTY13Q9BZ97 58 aa5.83□□□□□ -1.48
NDE1-210ENST00000574163 SPANXCQ9NY87 97 aa5.83□□□□□ -1.48
NDE1-210ENST00000574163 CBY1Q9Y3M2 126 aa5.83□□□□□ -1.48
NDE1-210ENST00000574163 LOC100996750A0A140TA64 210 aa5.82□□□□□ -1.48
NDE1-210ENST00000574163 ETDCA0A1B0GVM5 59 aa5.82□□□□□ -1.48
NDE1-210ENST00000574163 C5orf52A6NGY3 159 aa5.82□□□□□ -1.48
NDE1-210ENST00000574163 SCGB1D4Q6XE38 83 aa5.82□□□□□ -1.48
NDE1-210ENST00000574163 Q6ZVH6 145 aa5.82□□□□□ -1.48
NDE1-210ENST00000574163 KRTAP4-6Q9BYQ5 205 aa5.82□□□□□ -1.48
NDE1-210ENST00000574163 HMCN2Q8NDA2 5059 aa5.82□□□□□ -1.48
NDE1-210ENST00000574163 HSBP1L1C9JCN9 74 aa5.81□□□□□ -1.48
NDE1-210ENST00000574163 CRYGAP11844 174 aa5.81□□□□□ -1.48
NDE1-210ENST00000574163 S100A7L2Q5SY68 101 aa5.81□□□□□ -1.48
NDE1-210ENST00000574163 ZNF706Q9Y5V0 76 aaPredicted RBP5.81□□□□□ -1.48
NDE1-210ENST00000574163 IFITM1P13164 125 aa5.8□□□□□ -1.48
NDE1-210ENST00000574163 NPC2P61916 151 aa5.8□□□□□ -1.48
NDE1-210ENST00000574163 HIGD2AQ9BW72 106 aa5.8□□□□□ -1.48
NDE1-210ENST00000574163 TRAV23DV6A0A075B6W5 121 aa5.79□□□□□ -1.48
NDE1-210ENST00000574163 A0A087X002 238 aa5.79□□□□□ -1.48
NDE1-210ENST00000574163 Q6ZRX8 168 aa5.79□□□□□ -1.48
NDE1-210ENST00000574163 PCP2Q8IVA1 136 aa5.79□□□□□ -1.48
NDE1-210ENST00000574163 B5MCH6 92 aa5.78□□□□□ -1.48
NDE1-210ENST00000574163 LINC00518Q8N0U6 118 aa5.78□□□□□ -1.48
NDE1-210ENST00000574163 SPRR4Q96PI1 79 aa5.78□□□□□ -1.48
NDE1-210ENST00000574163 ZNF73O43830 326 aaPredicted RBP5.77□□□□□ -1.49
NDE1-210ENST00000574163 JOSD1Q15040 202 aaPredicted RBP5.77□□□□□ -1.49
NDE1-210ENST00000574163 TYMSOSQ8TAI1 123 aa5.77□□□□□ -1.49
NDE1-210ENST00000574163 SMCR5Q8TEV8 140 aa5.77□□□□□ -1.49
NDE1-210ENST00000574163 SCGB1D1O95968 90 aa5.76□□□□□ -1.49
NDE1-210ENST00000574163 KRTAP13-2Q52LG2 175 aa5.76□□□□□ -1.49
NDE1-210ENST00000574163 CTAG1AP78358 180 aa5.75□□□□□ -1.49
NDE1-210ENST00000574163 LINC00483Q53H64 154 aa5.75□□□□□ -1.49
NDE1-210ENST00000574163 HINT1P49773 126 aaPredicted RBP5.74□□□□□ -1.49
NDE1-210ENST00000574163 OR13C6PQ8NH95 151 aa5.74□□□□□ -1.49
NDE1-210ENST00000574163 Q9BRP9 147 aa5.74□□□□□ -1.49
NDE1-210ENST00000574163 ANAPC11Q9NYG5 84 aa5.74□□□□□ -1.49
NDE1-210ENST00000574163 TRBV7-6A0A0J9YX20 115 aa5.72□□□□□ -1.49
NDE1-210ENST00000574163 DLEU1O43261 78 aa5.72□□□□□ -1.49
NDE1-210ENST00000574163 COX8AP10176 69 aa5.72□□□□□ -1.49
NDE1-210ENST00000574163 MUSTN1Q8IVN3 82 aa5.72□□□□□ -1.49
NDE1-210ENST00000574163 LINC00304Q8N9R0 145 aa5.72□□□□□ -1.49
NDE1-210ENST00000574163 DHRS4-AS1Q9P1J3 65 aa5.72□□□□□ -1.49
NDE1-210ENST00000574163 TRAV13-2A0A0B4J235 113 aa5.71□□□□□ -1.5
NDE1-210ENST00000574163 ERC2-IT1O76042 136 aa5.71□□□□□ -1.5
NDE1-210ENST00000574163 ELOF1P60002 83 aaKnown RBP5.71□□□□□ -1.5
NDE1-210ENST00000574163 C3orf22Q8N5N4 141 aa5.71□□□□□ -1.5
NDE1-210ENST00000574163 COX7BP24311 80 aa5.7□□□□□ -1.5
NDE1-210ENST00000574163 C6orf99Q4VX62 202 aa5.7□□□□□ -1.5
NDE1-210ENST00000574163 VAMP8Q9BV40 100 aa5.7□□□□□ -1.5
NDE1-210ENST00000574163 A0A1B0GWB2 263 aa5.69□□□□□ -1.5
NDE1-210ENST00000574163 A6NDN8 102 aa5.69□□□□□ -1.5
NDE1-210ENST00000574163 SPAG11AQ6PDA7 123 aa5.69□□□□□ -1.5
NDE1-210ENST00000574163 SPATA45Q537H7 98 aa5.68□□□□□ -1.5
NDE1-210ENST00000574163 GAGE2AQ6NT46 116 aa5.68□□□□□ -1.5
NDE1-210ENST00000574163 HIGD1BQ9P298 99 aa5.68□□□□□ -1.5
NDE1-210ENST00000574163 PAM16Q9Y3D7 125 aa5.68□□□□□ -1.5
NDE1-210ENST00000574163 LRP2P98164 4655 aa5.68□□□□□ -1.5
NDE1-210ENST00000574163 A4D1N5 150 aa5.67□□□□□ -1.5
NDE1-210ENST00000574163 SPRR1BP22528 89 aa5.67□□□□□ -1.5
NDE1-210ENST00000574163 SLC25A34Q6PIV7 304 aa5.67□□□□□ -1.5
NDE1-210ENST00000574163 HIST1H4GQ99525 98 aa5.67□□□□□ -1.5
NDE1-210ENST00000574163 TSPAN13O95857 204 aa5.66□□□□□ -1.5
NDE1-210ENST00000574163 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
NDE1-210ENST00000574163 MOBPQ13875 183 aa5.65□□□□□ -1.5
NDE1-210ENST00000574163 SSBP3-AS1Q7Z2R9 100 aa5.65□□□□□ -1.5
NDE1-210ENST00000574163 Q8NBF4 154 aa5.65□□□□□ -1.5
NDE1-210ENST00000574163 SMIM11BQ8TCY0 68 aa5.65□□□□□ -1.5
NDE1-210ENST00000574163 NHP2Q9NX24 153 aaKnown RBP5.65□□□□□ -1.5
NDE1-210ENST00000574163 UBR4Q5T4S7 5183 aa5.65□□□□□ -1.51
NDE1-210ENST00000574163 RPS29P62273 56 aaKnown RBP5.64□□□□□ -1.51
NDE1-210ENST00000574163 PRR4Q16378 134 aa5.64□□□□□ -1.51
NDE1-210ENST00000574163 PYY3Q5JQD4 70 aa5.64□□□□□ -1.51
NDE1-210ENST00000574163 ST20-AS1Q8NBB2 130 aa5.64□□□□□ -1.51
NDE1-210ENST00000574163 C14orf144Q96I85 54 aa5.64□□□□□ -1.51
NDE1-210ENST00000574163 IGLV9-49A0A0B4J1Y8 123 aa5.63□□□□□ -1.51
NDE1-210ENST00000574163 SPINK1P00995 79 aa5.63□□□□□ -1.51
NDE1-210ENST00000574163 TAL2Q16559 108 aa5.63□□□□□ -1.51
NDE1-210ENST00000574163 C2orf91Q6ZV80 131 aa5.63□□□□□ -1.51
NDE1-210ENST00000574163 IGLV5-48A0A075B6I7 105 aa5.62□□□□□ -1.51
NDE1-210ENST00000574163 VAMP3Q15836 100 aa5.62□□□□□ -1.51
NDE1-210ENST00000574163 A0A0B4J2C4 111 aa5.61□□□□□ -1.51
NDE1-210ENST00000574163 TEX49A0A1B0GTD5 131 aa5.61□□□□□ -1.51
NDE1-210ENST00000574163 SLC25A20O43772 301 aa5.61□□□□□ -1.51
NDE1-210ENST00000574163 C9orf153Q5TBE3 101 aa5.61□□□□□ -1.51
NDE1-210ENST00000574163 LAMTOR3Q9UHA4 124 aa5.61□□□□□ -1.51
NDE1-210ENST00000574163 FP248Q71RG6 208 aaPredicted RBP5.6□□□□□ -1.51
NDE1-210ENST00000574163 C12orf57Q99622 126 aa5.6□□□□□ -1.51
NDE1-210ENST00000574163 LINC01547P58512 204 aaPredicted RBP5.59□□□□□ -1.51
NDE1-210ENST00000574163 BVES-AS1Q5T3Y7 98 aa5.59□□□□□ -1.51
NDE1-210ENST00000574163 LINC00575Q6W349 94 aa5.59□□□□□ -1.51
NDE1-210ENST00000574163 CFC1BP0CG36 223 aa5.58□□□□□ -1.52
NDE1-210ENST00000574163 CFC1P0CG37 223 aa5.58□□□□□ -1.52
NDE1-210ENST00000574163 TPRXLQ17RH7 258 aa5.58□□□□□ -1.52
NDE1-210ENST00000574163 KRTAP19-4Q3LI73 84 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms