RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 HIVEP2P31629 2446 aa1.76□□□□□ -2.13
ERCC4-204ENST00000573018 IGKV3D-7A0A0C4DH55 119 aa1.76□□□□□ -2.13
ERCC4-204ENST00000573018 J3QKU1 62 aa1.76□□□□□ -2.13
ERCC4-204ENST00000573018 NCR3O14931 201 aa1.76□□□□□ -2.13
ERCC4-204ENST00000573018 ZNF73O43830 326 aaPredicted RBP1.76□□□□□ -2.13
ERCC4-204ENST00000573018 ERC2-IT1O76042 136 aa1.76□□□□□ -2.13
ERCC4-204ENST00000573018 NREPQ16612 68 aa1.76□□□□□ -2.13
ERCC4-204ENST00000573018 C6orf99Q4VX62 202 aa1.76□□□□□ -2.13
ERCC4-204ENST00000573018 LINC00575Q6W349 94 aa1.76□□□□□ -2.13
ERCC4-204ENST00000573018 C6orf223Q8N319 242 aa1.76□□□□□ -2.13
ERCC4-204ENST00000573018 Q8N9L7 120 aa1.76□□□□□ -2.13
ERCC4-204ENST00000573018 FLNCQ14315 2725 aa1.76□□□□□ -2.13
ERCC4-204ENST00000573018 ITPR1Q14643 2758 aa1.76□□□□□ -2.13
ERCC4-204ENST00000573018 IGSF10Q6WRI0 2623 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 DMXL1Q9Y485 3027 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 ABCA12Q86UK0 2595 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 COL6A3P12111 3177 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 IGKV2-28A0A075B6P5 120 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 SMIM26A0A096LP01 95 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 ETDCA0A1B0GVM5 59 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 BPY2O14599 106 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 IGKV2D-28P01615 120 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 IGLV6-57P01721 117 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 HTN3P15516 51 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 ENHOQ6UWT2 76 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 SOSTDC1Q6X4U4 206 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 Q6ZQY7 126 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 LINC00846Q9NV44 126 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 V9GYY9 64 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 ATMQ13315 3056 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 CELSR3Q9NYQ7 3312 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 EPG5Q9HCE0 2579 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 SORL1Q92673 2214 aa1.75□□□□□ -2.13
ERCC4-204ENST00000573018 LOC400499M0QZD8 3231 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 CCDC168Q8NDH2 2452 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 DMXL2Q8TDJ6 3036 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 IGLV4-60A0A075B6I1 120 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 IGLV10-54A0A075B6I4 117 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 CHTF8P0CG12 524 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 MP68P56378 58 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 ELOF1P60002 83 aaKnown RBP1.74□□□□□ -2.13
ERCC4-204ENST00000573018 KLKP1Q107X0 134 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 DEFB135Q30KP9 77 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 CLPSL2Q6UWE3 100 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 Q6ZQT0 140 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 C20orf197Q8N268 126 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 WFDC11Q8NEX6 87 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 CRCT1Q9UGL9 99 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 KLK12Q9UKR0 248 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 C2CD3Q4AC94 2353 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 FLNAP21333 2647 aaKnown RBP1.74□□□□□ -2.13
ERCC4-204ENST00000573018 SETD2Q9BYW2 2564 aaPredicted RBP1.74□□□□□ -2.13
ERCC4-204ENST00000573018 MAP1AP78559 2803 aaPredicted RBP1.74□□□□□ -2.13
ERCC4-204ENST00000573018 UBR5O95071 2799 aaPredicted RBP1.74□□□□□ -2.13
ERCC4-204ENST00000573018 CFAP46Q8IYW2 2715 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 CHD6Q8TD26 2715 aa1.74□□□□□ -2.13
ERCC4-204ENST00000573018 POLQO75417 2590 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 JMJD1CQ15652 2540 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 ITPR3Q14573 2671 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 IGKV2D-24A0A075B6R9 120 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 PLAC8L1A1L4L8 177 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 SYCNQ0VAF6 134 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 LYPD5Q6UWN5 251 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 FAM19A5Q7Z5A7 132 aaPredicted RBP1.73□□□□□ -2.13
ERCC4-204ENST00000573018 MRPL55Q7Z7F7 128 aaKnown RBP1.73□□□□□ -2.13
ERCC4-204ENST00000573018 CAMK2N1Q7Z7J9 78 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 SMCR5Q8TEV8 140 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 DPH3Q96FX2 82 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 LINC00474Q9P2X8 69 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 CFAP47Q6ZTR5 3102 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 MUC3AQ02505 3323 aa1.73□□□□□ -2.13
ERCC4-204ENST00000573018 ZFHX4Q86UP3 3567 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 A0A096LPF7 62 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 TRAV10A0A0B4J240 114 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 TRBV7-4A0A0J9YYF1 115 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 H3BPC8 53 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 PSCAO43653 123 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 UBE2BP63146 152 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 LINC01556Q5JQF7 62 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 C3orf56Q8N813 242 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 TMEM254Q8TBM7 123 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 PRO0628Q9UI54 55 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 CR1P17927 2039 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 MTORP42345 2549 aa1.72□□□□□ -2.13
ERCC4-204ENST00000573018 GCN1Q92616 2671 aaKnown RBP1.72□□□□□ -2.13
ERCC4-204ENST00000573018 SONP18583 2426 aaKnown RBP1.71□□□□□ -2.14
ERCC4-204ENST00000573018 ZFYVE26Q68DK2 2539 aa1.71□□□□□ -2.14
ERCC4-204ENST00000573018 A0A087WVE0 104 aa1.71□□□□□ -2.14
ERCC4-204ENST00000573018 PRM2P04554 102 aa1.71□□□□□ -2.14
ERCC4-204ENST00000573018 TLX1NBP0CAT3 122 aa1.71□□□□□ -2.14
ERCC4-204ENST00000573018 KIAA0087Q14695 138 aa1.71□□□□□ -2.14
ERCC4-204ENST00000573018 KPRPQ5T749 579 aaPredicted RBP1.71□□□□□ -2.14
ERCC4-204ENST00000573018 UNQ6190/PRO20217Q6UXQ8 127 aa1.71□□□□□ -2.14
ERCC4-204ENST00000573018 Q8NAQ8 132 aa1.71□□□□□ -2.14
ERCC4-204ENST00000573018 WFDC9Q8NEX5 89 aa1.71□□□□□ -2.14
ERCC4-204ENST00000573018 WFDC10AQ9H1F0 79 aa1.71□□□□□ -2.14
ERCC4-204ENST00000573018 KCNQ1DNQ9H478 68 aa1.71□□□□□ -2.14
ERCC4-204ENST00000573018 ZNF706Q9Y5V0 76 aaPredicted RBP1.71□□□□□ -2.14
ERCC4-204ENST00000573018 UTP20O75691 2785 aaKnown RBP1.71□□□□□ -2.14
ERCC4-204ENST00000573018 TEX15Q9BXT5 2789 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms