RNA–Protein interactions for RNA: ENST00000572255.5

LITAF-211, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4 BASIC

Gene LITAF, Length 516 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-211ENST00000572255 ZNF73O43830 326 aaPredicted RBP9.77□□□□□ -0.85
LITAF-211ENST00000572255 JOSD1Q15040 202 aaPredicted RBP9.77□□□□□ -0.85
LITAF-211ENST00000572255 LCE2AQ5TA79 106 aaPredicted RBP9.77□□□□□ -0.85
LITAF-211ENST00000572255 SYS1-DBNDD2H3BUS1 97 aa9.76□□□□□ -0.85
LITAF-211ENST00000572255 RPS29P62273 56 aaKnown RBP9.75□□□□□ -0.85
LITAF-211ENST00000572255 HIST1H2BKO60814 126 aa9.74□□□□□ -0.85
LITAF-211ENST00000572255 HIST1H2BJP06899 126 aa9.74□□□□□ -0.85
LITAF-211ENST00000572255 HIST1H2BOP23527 126 aa9.74□□□□□ -0.85
LITAF-211ENST00000572255 HIST1H2BBP33778 126 aa9.74□□□□□ -0.85
LITAF-211ENST00000572255 HIST1H2BDP58876 126 aa9.74□□□□□ -0.85
LITAF-211ENST00000572255 HIST1H2BCP62807 126 aa9.74□□□□□ -0.85
LITAF-211ENST00000572255 HIST2H2BEQ16778 126 aa9.74□□□□□ -0.85
LITAF-211ENST00000572255 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.74□□□□□ -0.85
LITAF-211ENST00000572255 Q8N377 158 aa9.74□□□□□ -0.85
LITAF-211ENST00000572255 HIST1H2BHQ93079 126 aa9.74□□□□□ -0.85
LITAF-211ENST00000572255 HIST1H2BNQ99877 126 aa9.74□□□□□ -0.85
LITAF-211ENST00000572255 HIST1H2BMQ99879 126 aa9.74□□□□□ -0.85
LITAF-211ENST00000572255 LITAFQ99732 161 aa9.73□□□□□ -0.85
LITAF-211ENST00000572255 C9orf153Q5TBE3 101 aa9.72□□□□□ -0.85
LITAF-211ENST00000572255 LINC01545Q5VT33 79 aa9.72□□□□□ -0.85
LITAF-211ENST00000572255 ST20-AS1Q8NBB2 130 aa9.72□□□□□ -0.85
LITAF-211ENST00000572255 LINC00308Q8TCZ7 52 aa9.72□□□□□ -0.85
LITAF-211ENST00000572255 CBY1Q9Y3M2 126 aa9.72□□□□□ -0.85
LITAF-211ENST00000572255 TIMM17BO60830 172 aa9.71□□□□□ -0.86
LITAF-211ENST00000572255 SPANXCQ9NY87 97 aa9.71□□□□□ -0.86
LITAF-211ENST00000572255 SLC25A20O43772 301 aa9.7□□□□□ -0.86
LITAF-211ENST00000572255 HINT1P49773 126 aaPredicted RBP9.7□□□□□ -0.86
LITAF-211ENST00000572255 C5orf52A6NGY3 159 aa9.69□□□□□ -0.86
LITAF-211ENST00000572255 ASB16-AS1Q495Z4 193 aa9.69□□□□□ -0.86
LITAF-211ENST00000572255 PET117Q6UWS5 81 aa9.69□□□□□ -0.86
LITAF-211ENST00000572255 OR13C6PQ8NH95 151 aa9.69□□□□□ -0.86
LITAF-211ENST00000572255 ZNF815PA8K554 130 aa9.68□□□□□ -0.86
LITAF-211ENST00000572255 SPANXDQ9BXN6 97 aa9.66□□□□□ -0.86
LITAF-211ENST00000572255 TTTY13Q9BZ97 58 aa9.66□□□□□ -0.86
LITAF-211ENST00000572255 C3orf79P0CE67 100 aa9.65□□□□□ -0.86
LITAF-211ENST00000572255 KRTAP9-2Q9BYQ4 174 aa9.65□□□□□ -0.86
LITAF-211ENST00000572255 SPRR1BP22528 89 aa9.64□□□□□ -0.87
LITAF-211ENST00000572255 DHRS4-AS1Q9P1J3 65 aa9.64□□□□□ -0.87
LITAF-211ENST00000572255 SEC61BP60468 96 aaKnown RBP9.63□□□□□ -0.87
LITAF-211ENST00000572255 LINC00518Q8N0U6 118 aa9.62□□□□□ -0.87
LITAF-211ENST00000572255 COX7BP24311 80 aa9.61□□□□□ -0.87
LITAF-211ENST00000572255 ELOF1P60002 83 aaKnown RBP9.61□□□□□ -0.87
LITAF-211ENST00000572255 KRTDAPP60985 99 aa9.61□□□□□ -0.87
LITAF-211ENST00000572255 SLC25A34Q6PIV7 304 aa9.61□□□□□ -0.87
LITAF-211ENST00000572255 KRTAP4-1Q9BYQ7 146 aa9.61□□□□□ -0.87
LITAF-211ENST00000572255 C6orf99Q4VX62 202 aa9.6□□□□□ -0.87
LITAF-211ENST00000572255 COA6Q5JTJ3 125 aaKnown RBP9.6□□□□□ -0.87
LITAF-211ENST00000572255 XP32Q5T750 250 aa9.59□□□□□ -0.87
LITAF-211ENST00000572255 LAMTOR3Q9UHA4 124 aa9.59□□□□□ -0.87
LITAF-211ENST00000572255 SCGB1D4Q6XE38 83 aa9.58□□□□□ -0.88
LITAF-211ENST00000572255 HRCT1Q6UXD1 115 aa9.57□□□□□ -0.88
LITAF-211ENST00000572255 LIMD2Q9BT23 127 aa9.57□□□□□ -0.88
LITAF-211ENST00000572255 ANKRD39Q53RE8 183 aa9.56□□□□□ -0.88
LITAF-211ENST00000572255 C20orf202A1L168 122 aa9.55□□□□□ -0.88
LITAF-211ENST00000572255 TAL2Q16559 108 aa9.55□□□□□ -0.88
LITAF-211ENST00000572255 DEFB105AQ8NG35 78 aa9.55□□□□□ -0.88
LITAF-211ENST00000572255 TRBV7-6A0A0J9YX20 115 aa9.54□□□□□ -0.88
LITAF-211ENST00000572255 Q1RN00 199 aa9.54□□□□□ -0.88
LITAF-211ENST00000572255 COPS9Q8WXC6 57 aa9.54□□□□□ -0.88
LITAF-211ENST00000572255 IFITM1P13164 125 aa9.53□□□□□ -0.88
LITAF-211ENST00000572255 ATOH7Q8N100 152 aa9.53□□□□□ -0.88
LITAF-211ENST00000572255 TEX49A0A1B0GTD5 131 aa9.52□□□□□ -0.89
LITAF-211ENST00000572255 LINC01547P58512 204 aaPredicted RBP9.52□□□□□ -0.89
LITAF-211ENST00000572255 A6NDN8 102 aa9.51□□□□□ -0.89
LITAF-211ENST00000572255 Q6ZVH6 145 aa9.51□□□□□ -0.89
LITAF-211ENST00000572255 A0A1B0GWB2 263 aa9.5□□□□□ -0.89
LITAF-211ENST00000572255 CD164Q04900 197 aa9.5□□□□□ -0.89
LITAF-211ENST00000572255 PCP2Q8IVA1 136 aa9.5□□□□□ -0.89
LITAF-211ENST00000572255 PRO1933Q9H354 126 aa9.5□□□□□ -0.89
LITAF-211ENST00000572255 MUSTN1Q8IVN3 82 aa9.49□□□□□ -0.89
LITAF-211ENST00000572255 SMIM29Q86T20 159 aa9.48□□□□□ -0.89
LITAF-211ENST00000572255 IGLV5-48A0A075B6I7 105 aa9.47□□□□□ -0.89
LITAF-211ENST00000572255 AKR1D1P51857 326 aa9.47□□□□□ -0.89
LITAF-211ENST00000572255 C9orf92A6NGG3 77 aa9.46□□□□□ -0.9
LITAF-211ENST00000572255 H7C2G1 150 aa9.46□□□□□ -0.9
LITAF-211ENST00000572255 TRAV13-2A0A0B4J235 113 aa9.44□□□□□ -0.9
LITAF-211ENST00000572255 A4D1N5 150 aa9.44□□□□□ -0.9
LITAF-211ENST00000572255 SMIM11BQ8TCY0 68 aa9.43□□□□□ -0.9
LITAF-211ENST00000572255 SNRPEP62304 92 aaKnown RBP9.42□□□□□ -0.9
LITAF-211ENST00000572255 PCOTHQ58A44 107 aa9.42□□□□□ -0.9
LITAF-211ENST00000572255 Q5XG85 94 aa9.42□□□□□ -0.9
LITAF-211ENST00000572255 NHP2Q9NX24 153 aaKnown RBP9.42□□□□□ -0.9
LITAF-211ENST00000572255 A0A0G2JQZ4 141 aa9.41□□□□□ -0.9
LITAF-211ENST00000572255 C1orf195Q5TG92 126 aa9.39□□□□□ -0.91
LITAF-211ENST00000572255 IGLV8-61A0A075B6I0 122 aa9.38□□□□□ -0.91
LITAF-211ENST00000572255 LCE2CQ5TA81 110 aa9.38□□□□□ -0.91
LITAF-211ENST00000572255 KRTAP9-6A0A140TA67 174 aa9.37□□□□□ -0.91
LITAF-211ENST00000572255 HIST3H2BBQ8N257 126 aa9.37□□□□□ -0.91
LITAF-211ENST00000572255 HIST1H2BLQ99880 126 aa9.36□□□□□ -0.91
LITAF-211ENST00000572255 VAMP3Q15836 100 aa9.35□□□□□ -0.91
LITAF-211ENST00000572255 KRTAP19-2Q3LHN2 52 aa9.35□□□□□ -0.91
LITAF-211ENST00000572255 HSBP1L1C9JCN9 74 aa9.34□□□□□ -0.91
LITAF-211ENST00000572255 S100A2P29034 98 aa9.34□□□□□ -0.91
LITAF-211ENST00000572255 F8WEM9 126 aa9.33□□□□□ -0.92
LITAF-211ENST00000572255 LINC00575Q6W349 94 aa9.33□□□□□ -0.92
LITAF-211ENST00000572255 TCL1BO95988 128 aa9.31□□□□□ -0.92
LITAF-211ENST00000572255 Q6ZQY7 126 aa9.3□□□□□ -0.92
LITAF-211ENST00000572255 hADV29S1A0JD25 119 aa9.29□□□□□ -0.92
LITAF-211ENST00000572255 LCE2DQ5TA82 110 aaPredicted RBP9.29□□□□□ -0.92
LITAF-211ENST00000572255 RPL37P61927 97 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms