RNA–Protein interactions for RNA: ENST00000571880.1

RAB40B-205, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,020 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-205ENST00000571880 A0A0J9YXY3 114 aa9.32□□□□□ -0.92
RAB40B-205ENST00000571880 SPINK1P00995 79 aa9.32□□□□□ -0.92
RAB40B-205ENST00000571880 NMUP48645 174 aa9.32□□□□□ -0.92
RAB40B-205ENST00000571880 ST20-AS1Q8NBB2 130 aa9.32□□□□□ -0.92
RAB40B-205ENST00000571880 IGLV6-57P01721 117 aa9.31□□□□□ -0.92
RAB40B-205ENST00000571880 Q8N377 158 aa9.3□□□□□ -0.92
RAB40B-205ENST00000571880 COLCA2A8K830 154 aa9.29□□□□□ -0.92
RAB40B-205ENST00000571880 NDUFC2O95298 119 aa9.29□□□□□ -0.92
RAB40B-205ENST00000571880 ZNF73O43830 326 aaPredicted RBP9.28□□□□□ -0.92
RAB40B-205ENST00000571880 KRTAP4-1Q9BYQ7 146 aa9.28□□□□□ -0.92
RAB40B-205ENST00000571880 TMA7Q9Y2S6 64 aaKnown RBP9.28□□□□□ -0.92
RAB40B-205ENST00000571880 E9PLD3 99 aa9.27□□□□□ -0.93
RAB40B-205ENST00000571880 JOSD1Q15040 202 aaPredicted RBP9.25□□□□□ -0.93
RAB40B-205ENST00000571880 ASB16-AS1Q495Z4 193 aa9.25□□□□□ -0.93
RAB40B-205ENST00000571880 SSBP3-AS1Q7Z2R9 100 aa9.25□□□□□ -0.93
RAB40B-205ENST00000571880 OR13C6PQ8NH95 151 aa9.25□□□□□ -0.93
RAB40B-205ENST00000571880 TTTY13Q9BZ97 58 aa9.25□□□□□ -0.93
RAB40B-205ENST00000571880 LITAFQ99732 161 aa9.24□□□□□ -0.93
RAB40B-205ENST00000571880 SYS1-DBNDD2H3BUS1 97 aa9.23□□□□□ -0.93
RAB40B-205ENST00000571880 SLC25A20O43772 301 aa9.23□□□□□ -0.93
RAB40B-205ENST00000571880 HRCT1Q6UXD1 115 aa9.23□□□□□ -0.93
RAB40B-205ENST00000571880 LINC00308Q8TCZ7 52 aa9.23□□□□□ -0.93
RAB40B-205ENST00000571880 HIST1H2BKO60814 126 aa9.21□□□□□ -0.94
RAB40B-205ENST00000571880 HIST1H2BJP06899 126 aa9.21□□□□□ -0.94
RAB40B-205ENST00000571880 HIST1H2BOP23527 126 aa9.21□□□□□ -0.94
RAB40B-205ENST00000571880 HIST1H2BBP33778 126 aa9.21□□□□□ -0.94
RAB40B-205ENST00000571880 HIST1H2BDP58876 126 aa9.21□□□□□ -0.94
RAB40B-205ENST00000571880 RPS29P62273 56 aaKnown RBP9.21□□□□□ -0.94
RAB40B-205ENST00000571880 HIST1H2BCP62807 126 aa9.21□□□□□ -0.94
RAB40B-205ENST00000571880 HIST2H2BEQ16778 126 aa9.21□□□□□ -0.94
RAB40B-205ENST00000571880 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.21□□□□□ -0.94
RAB40B-205ENST00000571880 HIST1H2BHQ93079 126 aa9.21□□□□□ -0.94
RAB40B-205ENST00000571880 HIST1H2BNQ99877 126 aa9.21□□□□□ -0.94
RAB40B-205ENST00000571880 HIST1H2BMQ99879 126 aa9.21□□□□□ -0.94
RAB40B-205ENST00000571880 ZNF815PA8K554 130 aa9.2□□□□□ -0.94
RAB40B-205ENST00000571880 SPANXCQ9NY87 97 aa9.2□□□□□ -0.94
RAB40B-205ENST00000571880 SEC61BP60468 96 aaKnown RBP9.19□□□□□ -0.94
RAB40B-205ENST00000571880 HINT1P49773 126 aaPredicted RBP9.18□□□□□ -0.94
RAB40B-205ENST00000571880 XP32Q5T750 250 aa9.18□□□□□ -0.94
RAB40B-205ENST00000571880 LINC01545Q5VT33 79 aa9.18□□□□□ -0.94
RAB40B-205ENST00000571880 TIMM17BO60830 172 aa9.15□□□□□ -0.94
RAB40B-205ENST00000571880 Q1RN00 199 aa9.15□□□□□ -0.94
RAB40B-205ENST00000571880 C6orf99Q4VX62 202 aa9.15□□□□□ -0.94
RAB40B-205ENST00000571880 C3orf79P0CE67 100 aa9.14□□□□□ -0.95
RAB40B-205ENST00000571880 COX7BP24311 80 aa9.14□□□□□ -0.95
RAB40B-205ENST00000571880 LINC01547P58512 204 aaPredicted RBP9.14□□□□□ -0.95
RAB40B-205ENST00000571880 KRTDAPP60985 99 aa9.14□□□□□ -0.95
RAB40B-205ENST00000571880 DEFB105AQ8NG35 78 aa9.14□□□□□ -0.95
RAB40B-205ENST00000571880 SPANXDQ9BXN6 97 aa9.14□□□□□ -0.95
RAB40B-205ENST00000571880 C9orf92A6NGG3 77 aa9.13□□□□□ -0.95
RAB40B-205ENST00000571880 PET117Q6UWS5 81 aa9.13□□□□□ -0.95
RAB40B-205ENST00000571880 DHRS4-AS1Q9P1J3 65 aa9.13□□□□□ -0.95
RAB40B-205ENST00000571880 CBY1Q9Y3M2 126 aa9.13□□□□□ -0.95
RAB40B-205ENST00000571880 SPRR1BP22528 89 aa9.12□□□□□ -0.95
RAB40B-205ENST00000571880 ELOF1P60002 83 aaKnown RBP9.12□□□□□ -0.95
RAB40B-205ENST00000571880 H7C2G1 150 aa9.11□□□□□ -0.95
RAB40B-205ENST00000571880 ATOH7Q8N100 152 aa9.11□□□□□ -0.95
RAB40B-205ENST00000571880 ANKRD39Q53RE8 183 aa9.1□□□□□ -0.95
RAB40B-205ENST00000571880 SCGB1D4Q6XE38 83 aa9.1□□□□□ -0.95
RAB40B-205ENST00000571880 LIMD2Q9BT23 127 aa9.1□□□□□ -0.95
RAB40B-205ENST00000571880 LAMTOR3Q9UHA4 124 aa9.1□□□□□ -0.95
RAB40B-205ENST00000571880 A0A0G2JQZ4 141 aa9.09□□□□□ -0.95
RAB40B-205ENST00000571880 KRTAP9-6A0A140TA67 174 aa9.09□□□□□ -0.95
RAB40B-205ENST00000571880 TAL2Q16559 108 aa9.09□□□□□ -0.95
RAB40B-205ENST00000571880 SLC25A34Q6PIV7 304 aa9.09□□□□□ -0.95
RAB40B-205ENST00000571880 TMEM238LA0A1B0GVL6 79 aa9.08□□□□□ -0.96
RAB40B-205ENST00000571880 C5orf52A6NGY3 159 aa9.08□□□□□ -0.96
RAB40B-205ENST00000571880 PCOTHQ58A44 107 aa9.06□□□□□ -0.96
RAB40B-205ENST00000571880 A6NDN8 102 aa9.05□□□□□ -0.96
RAB40B-205ENST00000571880 LINC00518Q8N0U6 118 aa9.05□□□□□ -0.96
RAB40B-205ENST00000571880 PCP2Q8IVA1 136 aa9.04□□□□□ -0.96
RAB40B-205ENST00000571880 IGLV8-61A0A075B6I0 122 aa9.02□□□□□ -0.97
RAB40B-205ENST00000571880 TEX49A0A1B0GTD5 131 aa9.02□□□□□ -0.97
RAB40B-205ENST00000571880 C20orf202A1L168 122 aa9.02□□□□□ -0.97
RAB40B-205ENST00000571880 SMIM29Q86T20 159 aa9.02□□□□□ -0.97
RAB40B-205ENST00000571880 LCE2CQ5TA81 110 aa9.01□□□□□ -0.97
RAB40B-205ENST00000571880 MUSTN1Q8IVN3 82 aa9.01□□□□□ -0.97
RAB40B-205ENST00000571880 PRO1933Q9H354 126 aa9.01□□□□□ -0.97
RAB40B-205ENST00000571880 A0A1B0GWB2 263 aa9□□□□□ -0.97
RAB40B-205ENST00000571880 COA6Q5JTJ3 125 aaKnown RBP9□□□□□ -0.97
RAB40B-205ENST00000571880 KRTAP19-2Q3LHN2 52 aa8.98□□□□□ -0.97
RAB40B-205ENST00000571880 TRBV7-6A0A0J9YX20 115 aa8.97□□□□□ -0.97
RAB40B-205ENST00000571880 IFITM1P13164 125 aa8.97□□□□□ -0.97
RAB40B-205ENST00000571880 CD164Q04900 197 aa8.97□□□□□ -0.97
RAB40B-205ENST00000571880 SMIM11BQ8TCY0 68 aa8.97□□□□□ -0.97
RAB40B-205ENST00000571880 IGLV5-48A0A075B6I7 105 aa8.96□□□□□ -0.98
RAB40B-205ENST00000571880 AKR1D1P51857 326 aa8.96□□□□□ -0.98
RAB40B-205ENST00000571880 COPS9Q8WXC6 57 aa8.96□□□□□ -0.98
RAB40B-205ENST00000571880 C1orf195Q5TG92 126 aa8.95□□□□□ -0.98
RAB40B-205ENST00000571880 MT1HP80294 61 aa8.93□□□□□ -0.98
RAB40B-205ENST00000571880 TRAV13-2A0A0B4J235 113 aa8.91□□□□□ -0.98
RAB40B-205ENST00000571880 S100A1P23297 94 aa8.91□□□□□ -0.98
RAB40B-205ENST00000571880 Q6ZVH6 145 aa8.91□□□□□ -0.98
RAB40B-205ENST00000571880 NHP2Q9NX24 153 aaKnown RBP8.89□□□□□ -0.99
RAB40B-205ENST00000571880 A4D1N5 150 aa8.88□□□□□ -0.99
RAB40B-205ENST00000571880 Q5XG85 94 aa8.88□□□□□ -0.99
RAB40B-205ENST00000571880 F8WEM9 126 aa8.87□□□□□ -0.99
RAB40B-205ENST00000571880 C12orf57Q99622 126 aa8.87□□□□□ -0.99
RAB40B-205ENST00000571880 FSIP2Q5CZC0 6907 aa8.86□□□□□ -0.99
RAB40B-205ENST00000571880 GHRHP01286 108 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms