RNA–Protein interactions for RNA: ENST00000571346.1

PRPF8-202, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-202ENST00000571346 Q6ZRX8 168 aa7.82□□□□□ -1.16
PRPF8-202ENST00000571346 HIST1H2BHQ93079 126 aa7.82□□□□□ -1.16
PRPF8-202ENST00000571346 HIST1H2BNQ99877 126 aa7.82□□□□□ -1.16
PRPF8-202ENST00000571346 HIST1H2BMQ99879 126 aa7.82□□□□□ -1.16
PRPF8-202ENST00000571346 IGLV6-57P01721 117 aa7.81□□□□□ -1.16
PRPF8-202ENST00000571346 CTAG1AP78358 180 aa7.81□□□□□ -1.16
PRPF8-202ENST00000571346 MOBPQ13875 183 aa7.81□□□□□ -1.16
PRPF8-202ENST00000571346 LINC00483Q53H64 154 aa7.81□□□□□ -1.16
PRPF8-202ENST00000571346 ADAMTSL4-AS1Q5T5F5 129 aa7.81□□□□□ -1.16
PRPF8-202ENST00000571346 Q9BRP9 147 aa7.81□□□□□ -1.16
PRPF8-202ENST00000571346 EIF4EBP3O60516 100 aaPredicted RBP7.8□□□□□ -1.16
PRPF8-202ENST00000571346 FAT4Q6V0I7 4981 aa7.78□□□□□ -1.16
PRPF8-202ENST00000571346 ZNF73O43830 326 aaPredicted RBP7.78□□□□□ -1.16
PRPF8-202ENST00000571346 JOSD1Q15040 202 aaPredicted RBP7.78□□□□□ -1.16
PRPF8-202ENST00000571346 LOC105371267A0A1B0GV96 52 aa7.77□□□□□ -1.17
PRPF8-202ENST00000571346 ZNF815PA8K554 130 aa7.77□□□□□ -1.17
PRPF8-202ENST00000571346 LINC01545Q5VT33 79 aa7.77□□□□□ -1.17
PRPF8-202ENST00000571346 SPINK1P00995 79 aa7.76□□□□□ -1.17
PRPF8-202ENST00000571346 C9orf153Q5TBE3 101 aa7.76□□□□□ -1.17
PRPF8-202ENST00000571346 PET117Q6UWS5 81 aa7.76□□□□□ -1.17
PRPF8-202ENST00000571346 FP248Q71RG6 208 aaPredicted RBP7.76□□□□□ -1.17
PRPF8-202ENST00000571346 OR13C6PQ8NH95 151 aa7.76□□□□□ -1.17
PRPF8-202ENST00000571346 SPANXCQ9NY87 97 aa7.76□□□□□ -1.17
PRPF8-202ENST00000571346 SNRPEP62304 92 aaKnown RBP7.75□□□□□ -1.17
PRPF8-202ENST00000571346 LINC00308Q8TCZ7 52 aa7.75□□□□□ -1.17
PRPF8-202ENST00000571346 LITAFQ99732 161 aa7.75□□□□□ -1.17
PRPF8-202ENST00000571346 TTTY13Q9BZ97 58 aa7.75□□□□□ -1.17
PRPF8-202ENST00000571346 C3orf79P0CE67 100 aa7.74□□□□□ -1.17
PRPF8-202ENST00000571346 HINT1P49773 126 aaPredicted RBP7.74□□□□□ -1.17
PRPF8-202ENST00000571346 KRTDAPP60985 99 aa7.74□□□□□ -1.17
PRPF8-202ENST00000571346 CBY1Q9Y3M2 126 aa7.74□□□□□ -1.17
PRPF8-202ENST00000571346 TIMM17BO60830 172 aa7.73□□□□□ -1.17
PRPF8-202ENST00000571346 ST20-AS1Q8NBB2 130 aa7.73□□□□□ -1.17
PRPF8-202ENST00000571346 C5orf52A6NGY3 159 aa7.72□□□□□ -1.17
PRPF8-202ENST00000571346 AKR1D1P51857 326 aa7.71□□□□□ -1.18
PRPF8-202ENST00000571346 SCGB1D4Q6XE38 83 aa7.71□□□□□ -1.18
PRPF8-202ENST00000571346 SSBP3-AS1Q7Z2R9 100 aa7.71□□□□□ -1.18
PRPF8-202ENST00000571346 C20orf202A1L168 122 aa7.7□□□□□ -1.18
PRPF8-202ENST00000571346 S100A2P29034 98 aa7.7□□□□□ -1.18
PRPF8-202ENST00000571346 SPANXDQ9BXN6 97 aa7.7□□□□□ -1.18
PRPF8-202ENST00000571346 RPS29P62273 56 aaKnown RBP7.69□□□□□ -1.18
PRPF8-202ENST00000571346 KRTAP13-3Q3SY46 172 aa7.69□□□□□ -1.18
PRPF8-202ENST00000571346 Q8N377 158 aa7.69□□□□□ -1.18
PRPF8-202ENST00000571346 ATOH7Q8N100 152 aa7.68□□□□□ -1.18
PRPF8-202ENST00000571346 SLC25A20O43772 301 aa7.67□□□□□ -1.18
PRPF8-202ENST00000571346 COA6Q5JTJ3 125 aaKnown RBP7.67□□□□□ -1.18
PRPF8-202ENST00000571346 DHRS4-AS1Q9P1J3 65 aa7.67□□□□□ -1.18
PRPF8-202ENST00000571346 COX7BP24311 80 aa7.66□□□□□ -1.18
PRPF8-202ENST00000571346 C6orf99Q4VX62 202 aa7.66□□□□□ -1.18
PRPF8-202ENST00000571346 ANKRD39Q53RE8 183 aa7.66□□□□□ -1.18
PRPF8-202ENST00000571346 LINC00518Q8N0U6 118 aa7.66□□□□□ -1.18
PRPF8-202ENST00000571346 HIST3H2BBQ8N257 126 aa7.66□□□□□ -1.18
PRPF8-202ENST00000571346 ELOF1P60002 83 aaKnown RBP7.65□□□□□ -1.18
PRPF8-202ENST00000571346 SLC25A34Q6PIV7 304 aa7.65□□□□□ -1.18
PRPF8-202ENST00000571346 COPS9Q8WXC6 57 aa7.64□□□□□ -1.19
PRPF8-202ENST00000571346 HRCT1Q6UXD1 115 aa7.63□□□□□ -1.19
PRPF8-202ENST00000571346 A6NDN8 102 aa7.62□□□□□ -1.19
PRPF8-202ENST00000571346 Q1RN00 199 aa7.62□□□□□ -1.19
PRPF8-202ENST00000571346 PCP2Q8IVA1 136 aa7.62□□□□□ -1.19
PRPF8-202ENST00000571346 DEFB105AQ8NG35 78 aa7.62□□□□□ -1.19
PRPF8-202ENST00000571346 LAMTOR3Q9UHA4 124 aa7.62□□□□□ -1.19
PRPF8-202ENST00000571346 SPRR1BP22528 89 aa7.61□□□□□ -1.19
PRPF8-202ENST00000571346 HIST1H2BLQ99880 126 aa7.61□□□□□ -1.19
PRPF8-202ENST00000571346 LIMD2Q9BT23 127 aa7.61□□□□□ -1.19
PRPF8-202ENST00000571346 IFITM1P13164 125 aa7.6□□□□□ -1.19
PRPF8-202ENST00000571346 TAL2Q16559 108 aa7.6□□□□□ -1.19
PRPF8-202ENST00000571346 ASB16-AS1Q495Z4 193 aa7.6□□□□□ -1.19
PRPF8-202ENST00000571346 SMIM6P0DI80 62 aa7.59□□□□□ -1.19
PRPF8-202ENST00000571346 SEC61BP60468 96 aaKnown RBP7.59□□□□□ -1.19
PRPF8-202ENST00000571346 A0A1B0GWB2 263 aa7.58□□□□□ -1.2
PRPF8-202ENST00000571346 LCE2AQ5TA79 106 aaPredicted RBP7.58□□□□□ -1.2
PRPF8-202ENST00000571346 Q6ZVH6 145 aa7.58□□□□□ -1.2
PRPF8-202ENST00000571346 MUSTN1Q8IVN3 82 aa7.58□□□□□ -1.2
PRPF8-202ENST00000571346 SVIPQ8NHG7 77 aa7.58□□□□□ -1.2
PRPF8-202ENST00000571346 TRBV7-6A0A0J9YX20 115 aa7.57□□□□□ -1.2
PRPF8-202ENST00000571346 TEX49A0A1B0GTD5 131 aa7.56□□□□□ -1.2
PRPF8-202ENST00000571346 XP32Q5T750 250 aa7.56□□□□□ -1.2
PRPF8-202ENST00000571346 C12orf57Q99622 126 aa7.56□□□□□ -1.2
PRPF8-202ENST00000571346 TRAV13-2A0A0B4J235 113 aa7.54□□□□□ -1.2
PRPF8-202ENST00000571346 H7C2G1 150 aa7.54□□□□□ -1.2
PRPF8-202ENST00000571346 PRO1933Q9H354 126 aa7.54□□□□□ -1.2
PRPF8-202ENST00000571346 HSBP1L1C9JCN9 74 aa7.53□□□□□ -1.2
PRPF8-202ENST00000571346 NHP2Q9NX24 153 aaKnown RBP7.53□□□□□ -1.2
PRPF8-202ENST00000571346 IGLV5-48A0A075B6I7 105 aa7.52□□□□□ -1.21
PRPF8-202ENST00000571346 A4D1N5 150 aa7.52□□□□□ -1.21
PRPF8-202ENST00000571346 C9orf92A6NGG3 77 aa7.52□□□□□ -1.21
PRPF8-202ENST00000571346 SCGB1D1O95968 90 aa7.52□□□□□ -1.21
PRPF8-202ENST00000571346 PYY3Q5JQD4 70 aa7.52□□□□□ -1.21
PRPF8-202ENST00000571346 SMIM11BQ8TCY0 68 aa7.52□□□□□ -1.21
PRPF8-202ENST00000571346 KRTAP4-1Q9BYQ7 146 aa7.52□□□□□ -1.21
PRPF8-202ENST00000571346 CD164Q04900 197 aa7.51□□□□□ -1.21
PRPF8-202ENST00000571346 LCE2DQ5TA82 110 aaPredicted RBP7.51□□□□□ -1.21
PRPF8-202ENST00000571346 A0A0G2JQZ4 141 aa7.5□□□□□ -1.21
PRPF8-202ENST00000571346 LINC01547P58512 204 aaPredicted RBP7.5□□□□□ -1.21
PRPF8-202ENST00000571346 SMIM29Q86T20 159 aa7.5□□□□□ -1.21
PRPF8-202ENST00000571346 KRTAP9-2Q9BYQ4 174 aa7.5□□□□□ -1.21
PRPF8-202ENST00000571346 A6NJY4 79 aa7.49□□□□□ -1.21
PRPF8-202ENST00000571346 F8WEM9 126 aa7.47□□□□□ -1.21
PRPF8-202ENST00000571346 VAMP3Q15836 100 aa7.47□□□□□ -1.21
PRPF8-202ENST00000571346 PCP4L1A6NKN8 68 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms