RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TENM3Q9P273 2699 aa11.46□□□□□ -0.57
SCARF1-205ENST00000571272 BPY2O14599 106 aa11.45□□□□□ -0.58
SCARF1-205ENST00000571272 NREPQ16612 68 aa11.45□□□□□ -0.58
SCARF1-205ENST00000571272 SERP1Q9Y6X1 66 aa11.45□□□□□ -0.58
SCARF1-205ENST00000571272 OXLD1Q5BKU9 147 aa11.43□□□□□ -0.58
SCARF1-205ENST00000571272 SERTAD4-AS1Q5TG53 156 aa11.43□□□□□ -0.58
SCARF1-205ENST00000571272 SYCNQ0VAF6 134 aa11.42□□□□□ -0.58
SCARF1-205ENST00000571272 NKAPP1Q8N9T2 125 aa11.42□□□□□ -0.58
SCARF1-205ENST00000571272 IGKV4-1P06312 121 aa11.41□□□□□ -0.58
SCARF1-205ENST00000571272 H3BNG1 76 aa11.4□□□□□ -0.58
SCARF1-205ENST00000571272 C7orf33Q8WU49 177 aa11.4□□□□□ -0.58
SCARF1-205ENST00000571272 Q8N377 158 aa11.4□□□□□ -0.58
SCARF1-205ENST00000571272 EPM2AB3EWF7 344 aa11.39□□□□□ -0.59
SCARF1-205ENST00000571272 TMEM254Q8TBM7 123 aa11.39□□□□□ -0.59
SCARF1-205ENST00000571272 RPL37AP8A6NKH3 93 aa11.38□□□□□ -0.59
SCARF1-205ENST00000571272 ANK2Q01484 3957 aa11.38□□□□□ -0.59
SCARF1-205ENST00000571272 KCNQ1DNQ9H478 68 aa11.38□□□□□ -0.59
SCARF1-205ENST00000571272 F8P00451 2351 aa11.36□□□□□ -0.59
SCARF1-205ENST00000571272 KRTAP10-11P60412 298 aa11.36□□□□□ -0.59
SCARF1-205ENST00000571272 WIPF1O43516 503 aa11.35□□□□□ -0.59
SCARF1-205ENST00000571272 LINC01556Q5JQF7 62 aa11.35□□□□□ -0.59
SCARF1-205ENST00000571272 FAM168BA1KXE4 195 aa11.34□□□□□ -0.59
SCARF1-205ENST00000571272 DEFB131BA0A096LNP1 70 aa11.34□□□□□ -0.59
SCARF1-205ENST00000571272 NDUFC1O43677 76 aa11.34□□□□□ -0.59
SCARF1-205ENST00000571272 FLNBO75369 2602 aaKnown RBP11.33□□□□□ -0.6
SCARF1-205ENST00000571272 OCR1Q9BZK8 76 aa11.32□□□□□ -0.6
SCARF1-205ENST00000571272 IGLV5-48A0A075B6I7 105 aa11.31□□□□□ -0.6
SCARF1-205ENST00000571272 FP248Q71RG6 208 aaPredicted RBP11.31□□□□□ -0.6
SCARF1-205ENST00000571272 ST20-AS1Q8NBB2 130 aa11.31□□□□□ -0.6
SCARF1-205ENST00000571272 Q9BRP9 147 aa11.31□□□□□ -0.6
SCARF1-205ENST00000571272 LINC00474Q9P2X8 69 aa11.3□□□□□ -0.6
SCARF1-205ENST00000571272 A0A1W2PNM2 257 aa11.3□□□□□ -0.6
SCARF1-205ENST00000571272 Q6ZRX8 168 aa11.3□□□□□ -0.6
SCARF1-205ENST00000571272 FUSP35637 526 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCARF1-205ENST00000571272 CASC10Q5T4H9 136 aa11.29□□□□□ -0.6
SCARF1-205ENST00000571272 SMIM26A0A096LP01 95 aa11.29□□□□□ -0.6
SCARF1-205ENST00000571272 C11orf45Q8TAV5 145 aa11.28□□□□□ -0.6
SCARF1-205ENST00000571272 BAHCC1Q9P281 2608 aa11.28□□□□□ -0.6
SCARF1-205ENST00000571272 MAST4O15021 2626 aa11.28□□□□□ -0.6
SCARF1-205ENST00000571272 STAB1Q9NY15 2570 aa11.28□□□□□ -0.6
SCARF1-205ENST00000571272 ETDCA0A1B0GVM5 59 aa11.28□□□□□ -0.6
SCARF1-205ENST00000571272 ERC2-IT1O76042 136 aa11.28□□□□□ -0.6
SCARF1-205ENST00000571272 HIGD2AQ9BW72 106 aa11.28□□□□□ -0.6
SCARF1-205ENST00000571272 NOTCH1P46531 2555 aa11.27□□□□□ -0.6
SCARF1-205ENST00000571272 F8WDY8 70 aa11.27□□□□□ -0.6
SCARF1-205ENST00000571272 DHRS4-AS1Q9P1J3 65 aa11.27□□□□□ -0.6
SCARF1-205ENST00000571272 C1orf137Q5JT78 98 aa11.27□□□□□ -0.61
SCARF1-205ENST00000571272 KMT2BQ9UMN6 2715 aaPredicted RBP11.27□□□□□ -0.61
SCARF1-205ENST00000571272 PRYO14603 147 aa11.26□□□□□ -0.61
SCARF1-205ENST00000571272 FAM30AQ9NZY2 134 aa11.26□□□□□ -0.61
SCARF1-205ENST00000571272 A0A0U1RQV1 116 aa11.26□□□□□ -0.61
SCARF1-205ENST00000571272 SMIM29Q86T20 159 aa11.26□□□□□ -0.61
SCARF1-205ENST00000571272 KRTAP4-16G5E9R7 235 aaPredicted RBP11.26□□□□□ -0.61
SCARF1-205ENST00000571272 IGLV1-50A0A075B6I6 118 aa11.25□□□□□ -0.61
SCARF1-205ENST00000571272 LINC00336Q6ZUF6 198 aa11.25□□□□□ -0.61
SCARF1-205ENST00000571272 DNAH10OSP0CZ25 163 aa11.24□□□□□ -0.61
SCARF1-205ENST00000571272 KRTAP7-1Q8IUC3 87 aa11.24□□□□□ -0.61
SCARF1-205ENST00000571272 ATP5EP56381 51 aaPredicted RBP11.23□□□□□ -0.61
SCARF1-205ENST00000571272 TLX1NBP0CAT3 122 aa11.22□□□□□ -0.61
SCARF1-205ENST00000571272 TNP2Q05952 138 aa11.22□□□□□ -0.61
SCARF1-205ENST00000571272 MRAPQ8TCY5 172 aa11.22□□□□□ -0.61
SCARF1-205ENST00000571272 UBE2BP63146 152 aa11.21□□□□□ -0.61
SCARF1-205ENST00000571272 FAM229BQ4G0N7 80 aa11.21□□□□□ -0.61
SCARF1-205ENST00000571272 Q8NBF4 154 aa11.21□□□□□ -0.62
SCARF1-205ENST00000571272 SPRR1AP35321 89 aa11.2□□□□□ -0.62
SCARF1-205ENST00000571272 PLA2G2DQ9UNK4 145 aa11.2□□□□□ -0.62
SCARF1-205ENST00000571272 A0A0G2JQZ4 141 aa11.19□□□□□ -0.62
SCARF1-205ENST00000571272 A0A1W2PNN7 141 aa11.19□□□□□ -0.62
SCARF1-205ENST00000571272 LINC00588Q9Y4M8 146 aa11.19□□□□□ -0.62
SCARF1-205ENST00000571272 MRPL55Q7Z7F7 128 aaKnown RBP11.18□□□□□ -0.62
SCARF1-205ENST00000571272 MPLKIPQ8TAP9 179 aa11.17□□□□□ -0.62
SCARF1-205ENST00000571272 DSCR10P59022 87 aa11.17□□□□□ -0.62
SCARF1-205ENST00000571272 IGLV5-37A0A075B6J1 123 aa11.16□□□□□ -0.62
SCARF1-205ENST00000571272 K7EQZ3 153 aa11.16□□□□□ -0.62
SCARF1-205ENST00000571272 FBN1P35555 2871 aaKnown RBP11.16□□□□□ -0.62
SCARF1-205ENST00000571272 A0A1B0GW54 56 aa11.14□□□□□ -0.63
SCARF1-205ENST00000571272 SPRR4Q96PI1 79 aa11.14□□□□□ -0.63
SCARF1-205ENST00000571272 DEFB116Q30KQ4 102 aa11.12□□□□□ -0.63
SCARF1-205ENST00000571272 PRO0628Q9UI54 55 aa11.11□□□□□ -0.63
SCARF1-205ENST00000571272 PRB2P02812 416 aaPredicted RBP11.11□□□□□ -0.63
SCARF1-205ENST00000571272 REG3GQ6UW15 175 aa11.11□□□□□ -0.63
SCARF1-205ENST00000571272 LINC00476Q8WZB0 136 aa11.11□□□□□ -0.63
SCARF1-205ENST00000571272 CMYA5Q8N3K9 4069 aa11.1□□□□□ -0.63
SCARF1-205ENST00000571272 COL6A5A8TX70 2615 aa11.1□□□□□ -0.63
SCARF1-205ENST00000571272 NBEAL1Q6ZS30 2694 aa11.09□□□□□ -0.63
SCARF1-205ENST00000571272 PRLHP81277 87 aa11.07□□□□□ -0.64
SCARF1-205ENST00000571272 DNAH1Q9P2D7 4330 aa11.07□□□□□ -0.64
SCARF1-205ENST00000571272 IGKV2-24A0A0C4DH68 120 aa11.07□□□□□ -0.64
SCARF1-205ENST00000571272 LRCOL1A6NCL2 159 aa11.06□□□□□ -0.64
SCARF1-205ENST00000571272 LCE6AA0A183 80 aa11.06□□□□□ -0.64
SCARF1-205ENST00000571272 IGFL1Q6UW32 110 aa11.06□□□□□ -0.64
SCARF1-205ENST00000571272 PSCAO43653 123 aa11.05□□□□□ -0.64
SCARF1-205ENST00000571272 BRK1Q8WUW1 75 aa11.05□□□□□ -0.64
SCARF1-205ENST00000571272 KRTAP24-1Q3LI83 254 aa11.05□□□□□ -0.64
SCARF1-205ENST00000571272 HCG22E2RYF7 251 aa11.04□□□□□ -0.64
SCARF1-205ENST00000571272 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.03□□□□□ -0.64
SCARF1-205ENST00000571272 SRRM2Q9UQ35 2752 aaKnown RBP11.03□□□□□ -0.64
SCARF1-205ENST00000571272 WFDC13Q8IUB5 93 aa11.02□□□□□ -0.64
SCARF1-205ENST00000571272 A0A087WSZ3 146 aa11.02□□□□□ -0.65
SCARF1-205ENST00000571272 PRR4Q16378 134 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms