RNA–Protein interactions for RNA: ENST00000570979.1

SPNS2-203, Transcript of sphingolipid transporter 2, humanhuman

TSL 1 (best)

Gene SPNS2, Length 1,768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS2-203ENST00000570979 C22orf24Q9Y442 160 aa12.97□□□□□ -0.33
SPNS2-203ENST00000570979 KMT2AQ03164 3969 aa12.96□□□□□ -0.33
SPNS2-203ENST00000570979 HIGD2BQ4VC39 106 aa12.96□□□□□ -0.34
SPNS2-203ENST00000570979 BIRC6Q9NR09 4857 aa12.95□□□□□ -0.34
SPNS2-203ENST00000570979 OBSCN-AS1Q96MR7 158 aa12.95□□□□□ -0.34
SPNS2-203ENST00000570979 JMJD7-PLA2G4BH0Y9G9 81 aa12.94□□□□□ -0.34
SPNS2-203ENST00000570979 SYCNQ0VAF6 134 aa12.94□□□□□ -0.34
SPNS2-203ENST00000570979 LINC00588Q9Y4M8 146 aa12.94□□□□□ -0.34
SPNS2-203ENST00000570979 TRBV7-6A0A0J9YX20 115 aa12.94□□□□□ -0.34
SPNS2-203ENST00000570979 C6orf99Q4VX62 202 aa12.94□□□□□ -0.34
SPNS2-203ENST00000570979 ATP5EP2Q5VTU8 51 aa12.93□□□□□ -0.34
SPNS2-203ENST00000570979 Q6ZRU5 148 aa12.93□□□□□ -0.34
SPNS2-203ENST00000570979 M0R378 163 aa12.92□□□□□ -0.34
SPNS2-203ENST00000570979 VPS13DQ5THJ4 4388 aa12.91□□□□□ -0.34
SPNS2-203ENST00000570979 Q5XG85 94 aa12.91□□□□□ -0.34
SPNS2-203ENST00000570979 LINC00575Q6W349 94 aa12.91□□□□□ -0.34
SPNS2-203ENST00000570979 DIRC1Q969H9 104 aa12.9□□□□□ -0.34
SPNS2-203ENST00000570979 TRAV23DV6A0A075B6W5 121 aa12.89□□□□□ -0.35
SPNS2-203ENST00000570979 BCE1O60756 84 aa12.89□□□□□ -0.35
SPNS2-203ENST00000570979 TLX1NBP0CAT3 122 aa12.89□□□□□ -0.35
SPNS2-203ENST00000570979 XAGE1AQ9HD64 81 aa12.88□□□□□ -0.35
SPNS2-203ENST00000570979 EPM2AB3EWF7 344 aa12.87□□□□□ -0.35
SPNS2-203ENST00000570979 USP17L23D6RBM5 183 aa12.87□□□□□ -0.35
SPNS2-203ENST00000570979 APLNQ9ULZ1 77 aa12.87□□□□□ -0.35
SPNS2-203ENST00000570979 VPREB1P12018 145 aa12.86□□□□□ -0.35
SPNS2-203ENST00000570979 Q8NDZ9 215 aa12.86□□□□□ -0.35
SPNS2-203ENST00000570979 TRBV10-3A0A0K0K1G6 114 aa12.85□□□□□ -0.35
SPNS2-203ENST00000570979 FRAS1Q86XX4 4008 aa12.84□□□□□ -0.35
SPNS2-203ENST00000570979 OXTP01178 125 aa12.84□□□□□ -0.35
SPNS2-203ENST00000570979 ZNF73O43830 326 aaPredicted RBP12.84□□□□□ -0.35
SPNS2-203ENST00000570979 CYSTM1Q9H1C7 97 aa12.84□□□□□ -0.35
SPNS2-203ENST00000570979 PLA2G2DQ9UNK4 145 aa12.84□□□□□ -0.35
SPNS2-203ENST00000570979 COX7BP24311 80 aa12.83□□□□□ -0.36
SPNS2-203ENST00000570979 DNAH6Q9C0G6 4158 aa12.83□□□□□ -0.36
SPNS2-203ENST00000570979 SLPIP03973 132 aa12.82□□□□□ -0.36
SPNS2-203ENST00000570979 DNAH10Q8IVF4 4471 aa12.82□□□□□ -0.36
SPNS2-203ENST00000570979 PRO0628Q9UI54 55 aa12.81□□□□□ -0.36
SPNS2-203ENST00000570979 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.81□□□□□ -0.36
SPNS2-203ENST00000570979 DSCR8Q96T75 97 aa12.81□□□□□ -0.36
SPNS2-203ENST00000570979 NKAPP1Q8N9T2 125 aa12.8□□□□□ -0.36
SPNS2-203ENST00000570979 Q6ZRP5 223 aa12.79□□□□□ -0.36
SPNS2-203ENST00000570979 ELOF1P60002 83 aaKnown RBP12.79□□□□□ -0.36
SPNS2-203ENST00000570979 C4orf26Q17RF5 130 aa12.79□□□□□ -0.36
SPNS2-203ENST00000570979 C14orf132Q9NPU4 83 aa12.79□□□□□ -0.36
SPNS2-203ENST00000570979 SERP1Q9Y6X1 66 aa12.79□□□□□ -0.36
SPNS2-203ENST00000570979 PDE6GP18545 87 aa12.78□□□□□ -0.36
SPNS2-203ENST00000570979 CCKP06307 115 aa12.77□□□□□ -0.36
SPNS2-203ENST00000570979 LINC00846Q9NV44 126 aa12.77□□□□□ -0.36
SPNS2-203ENST00000570979 HRCT1Q6UXD1 115 aa12.76□□□□□ -0.37
SPNS2-203ENST00000570979 UBE2DNLQ8IWF7 75 aa12.76□□□□□ -0.37
SPNS2-203ENST00000570979 IGLV5-37A0A075B6J1 123 aa12.74□□□□□ -0.37
SPNS2-203ENST00000570979 FAM236DA0A1B0GTK5 79 aa12.74□□□□□ -0.37
SPNS2-203ENST00000570979 FAM236CP0DP71 79 aa12.74□□□□□ -0.37
SPNS2-203ENST00000570979 RBM3P98179 157 aaKnown RBP12.74□□□□□ -0.37
SPNS2-203ENST00000570979 IGKV3D-7A0A0C4DH55 119 aa12.74□□□□□ -0.37
SPNS2-203ENST00000570979 C14orf177Q52M58 125 aa12.74□□□□□ -0.37
SPNS2-203ENST00000570979 KCNQ1DNQ9H478 68 aa12.73□□□□□ -0.37
SPNS2-203ENST00000570979 C9orf129Q5T035 196 aaKnown RBP12.72□□□□□ -0.37
SPNS2-203ENST00000570979 LAMTOR3Q9UHA4 124 aa12.72□□□□□ -0.37
SPNS2-203ENST00000570979 Q6ZQY7 126 aa12.71□□□□□ -0.37
SPNS2-203ENST00000570979 PKIGQ9Y2B9 76 aa12.71□□□□□ -0.37
SPNS2-203ENST00000570979 LOC110117498A0A087WWA1 95 aa12.69□□□□□ -0.38
SPNS2-203ENST00000570979 LINC00528Q8N1L1 170 aa12.69□□□□□ -0.38
SPNS2-203ENST00000570979 PSCAO43653 123 aa12.68□□□□□ -0.38
SPNS2-203ENST00000570979 ATP5EP56381 51 aaPredicted RBP12.68□□□□□ -0.38
SPNS2-203ENST00000570979 PRYO14603 147 aa12.67□□□□□ -0.38
SPNS2-203ENST00000570979 A0A087WVE0 104 aa12.66□□□□□ -0.38
SPNS2-203ENST00000570979 TRAV7A0A075B6U4 112 aa12.66□□□□□ -0.38
SPNS2-203ENST00000570979 C7orf33Q8WU49 177 aa12.66□□□□□ -0.38
SPNS2-203ENST00000570979 KLKP1Q107X0 134 aa12.65□□□□□ -0.38
SPNS2-203ENST00000570979 DHRS4-AS1Q9P1J3 65 aa12.65□□□□□ -0.38
SPNS2-203ENST00000570979 SMIM26A0A096LP01 95 aa12.64□□□□□ -0.39
SPNS2-203ENST00000570979 CNBPP62633 177 aaKnown RBP12.64□□□□□ -0.39
SPNS2-203ENST00000570979 NDUFC1O43677 76 aa12.63□□□□□ -0.39
SPNS2-203ENST00000570979 DNAH2Q9P225 4427 aa12.63□□□□□ -0.39
SPNS2-203ENST00000570979 M0R2N4 97 aa12.62□□□□□ -0.39
SPNS2-203ENST00000570979 UBL5Q9BZL1 73 aa12.62□□□□□ -0.39
SPNS2-203ENST00000570979 HECTD4Q9Y4D8 3996 aa12.62□□□□□ -0.39
SPNS2-203ENST00000570979 SERTAD4-AS1Q5TG53 156 aa12.61□□□□□ -0.39
SPNS2-203ENST00000570979 FAT2Q9NYQ8 4349 aa12.61□□□□□ -0.39
SPNS2-203ENST00000570979 H7BZZ5 65 aa12.61□□□□□ -0.39
SPNS2-203ENST00000570979 Q6ZQT0 140 aa12.61□□□□□ -0.39
SPNS2-203ENST00000570979 DNAH17Q9UFH2 4485 aa12.6□□□□□ -0.39
SPNS2-203ENST00000570979 IGLV1-50A0A075B6I6 118 aa12.6□□□□□ -0.39
SPNS2-203ENST00000570979 ETDCA0A1B0GVM5 59 aa12.58□□□□□ -0.39
SPNS2-203ENST00000570979 MRPL55Q7Z7F7 128 aaKnown RBP12.58□□□□□ -0.39
SPNS2-203ENST00000570979 C16orf90A8MZG2 172 aa12.57□□□□□ -0.4
SPNS2-203ENST00000570979 SPRR1AP35321 89 aa12.57□□□□□ -0.4
SPNS2-203ENST00000570979 C20orf197Q8N268 126 aa12.57□□□□□ -0.4
SPNS2-203ENST00000570979 RTL8CO15255 209 aa12.56□□□□□ -0.4
SPNS2-203ENST00000570979 Q6ZRX8 168 aa12.56□□□□□ -0.4
SPNS2-203ENST00000570979 Q6ZR54 194 aa12.55□□□□□ -0.4
SPNS2-203ENST00000570979 LINC00336Q6ZUF6 198 aa12.55□□□□□ -0.4
SPNS2-203ENST00000570979 TRBV7-4A0A0J9YYF1 115 aa12.53□□□□□ -0.4
SPNS2-203ENST00000570979 NBDYA0A0U1RRE5 68 aa12.53□□□□□ -0.4
SPNS2-203ENST00000570979 KRTAP1-5Q9BYS1 174 aa12.53□□□□□ -0.4
SPNS2-203ENST00000570979 A0A1B0GVY2 172 aa12.52□□□□□ -0.41
SPNS2-203ENST00000570979 HERC2O95714 4834 aa12.51□□□□□ -0.41
SPNS2-203ENST00000570979 KRTAP4-16G5E9R7 235 aaPredicted RBP12.51□□□□□ -0.41
SPNS2-203ENST00000570979 PKHD1P08F94 4074 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms