RNA–Protein interactions for RNA: ENST00000570740.1

CDC27-211, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 594 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-211ENST00000570740 NPBQ8NG41 125 aa2.62□□□□□ -1.99
CDC27-211ENST00000570740 ZCCHC13Q8WW36 166 aaKnown RBP2.62□□□□□ -1.99
CDC27-211ENST00000570740 GAFA1Q96PS6 74 aa2.62□□□□□ -1.99
CDC27-211ENST00000570740 XAGE1AQ9HD64 81 aa2.62□□□□□ -1.99
CDC27-211ENST00000570740 LINC01558Q9Y6Z2 57 aa2.62□□□□□ -1.99
CDC27-211ENST00000570740 CR1P17927 2039 aa2.62□□□□□ -1.99
CDC27-211ENST00000570740 NACAE9PAV3 2078 aa2.62□□□□□ -1.99
CDC27-211ENST00000570740 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.62□□□□□ -1.99
CDC27-211ENST00000570740 HIVEP2P31629 2446 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 ABCA1O95477 2261 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 IGKV2-28A0A075B6P5 120 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 TRGV2A0A075B6R0 118 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 IGHV3-73A0A0B4J1V6 119 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 IGHV3-64DA0A0J9YX35 117 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 K7EQG2 157 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 IGKV2D-28P01615 120 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 MSMBP08118 114 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 COX7BP24311 80 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 HIGD2BQ4VC39 106 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.61□□□□□ -1.99
CDC27-211ENST00000570740 LINC00575Q6W349 94 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 Q6ZTI0 123 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 COX7B2Q8TF08 81 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 LINC00467Q9BRT7 94 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 WFDC10AQ9H1F0 79 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 KAAG1Q9UBP8 84 aa2.61□□□□□ -1.99
CDC27-211ENST00000570740 NIPBLQ6KC79 2804 aaeCLIP2.6□□□□□ -1.99
CDC27-211ENST00000570740 ACANP16112 2415 aa2.6□□□□□ -1.99
CDC27-211ENST00000570740 NSD1Q96L73 2696 aaPredicted RBP2.6□□□□□ -1.99
CDC27-211ENST00000570740 IGHV3-16A0A0C4DH30 117 aa2.6□□□□□ -1.99
CDC27-211ENST00000570740 CLPSL1A2RUU4 121 aa2.6□□□□□ -1.99
CDC27-211ENST00000570740 CCL18P55774 89 aa2.6□□□□□ -1.99
CDC27-211ENST00000570740 COX17Q14061 63 aa2.6□□□□□ -1.99
CDC27-211ENST00000570740 RNASE13Q5GAN3 156 aaKnown RBP2.6□□□□□ -1.99
CDC27-211ENST00000570740 ZNF706Q9Y5V0 76 aaPredicted RBP2.6□□□□□ -1.99
CDC27-211ENST00000570740 ZANQ9Y493 2812 aa2.59□□□□□ -1.99
CDC27-211ENST00000570740 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.59□□□□□ -1.99
CDC27-211ENST00000570740 IGHV3OR16-13A0A075B7E8 117 aa2.59□□□□□ -1.99
CDC27-211ENST00000570740 NDUFA4O00483 81 aa2.59□□□□□ -1.99
CDC27-211ENST00000570740 TFF1P04155 84 aa2.59□□□□□ -1.99
CDC27-211ENST00000570740 IGKV4-1P06312 121 aa2.59□□□□□ -1.99
CDC27-211ENST00000570740 IGHV1-8P0DP01 117 aa2.59□□□□□ -1.99
CDC27-211ENST00000570740 CNBPP62633 177 aaKnown RBP2.59□□□□□ -1.99
CDC27-211ENST00000570740 DEFB108BQ8NET1 73 aa2.59□□□□□ -1.99
CDC27-211ENST00000570740 CHCHD7Q9BUK0 85 aa2.59□□□□□ -1.99
CDC27-211ENST00000570740 CSPG4Q6UVK1 2322 aa2.59□□□□□ -2
CDC27-211ENST00000570740 NAV3Q8IVL0 2385 aa2.59□□□□□ -2
CDC27-211ENST00000570740 MTORP42345 2549 aa2.59□□□□□ -2
CDC27-211ENST00000570740 MALRD1Q5VYJ5 2156 aa2.59□□□□□ -2
CDC27-211ENST00000570740 TET2Q6N021 2002 aaPredicted RBP2.58□□□□□ -2
CDC27-211ENST00000570740 IGHV7-81A0A0B4J1V7 117 aa2.58□□□□□ -2
CDC27-211ENST00000570740 IGHV3-72A0A0B4J1Y9 119 aa2.58□□□□□ -2
CDC27-211ENST00000570740 NDUFAF8A1L188 74 aa2.58□□□□□ -2
CDC27-211ENST00000570740 LYNX1G3V0Z9 82 aa2.58□□□□□ -2
CDC27-211ENST00000570740 APELAP0DMC3 54 aa2.58□□□□□ -2
CDC27-211ENST00000570740 LYNX1P0DP58 116 aa2.58□□□□□ -2
CDC27-211ENST00000570740 SPAG11BQ08648 103 aa2.58□□□□□ -2
CDC27-211ENST00000570740 KRTAP5-4Q6L8H1 288 aa2.58□□□□□ -2
CDC27-211ENST00000570740 CHCHD10Q8WYQ3 142 aaPredicted RBP2.58□□□□□ -2
CDC27-211ENST00000570740 DPM3Q9P2X0 92 aa2.58□□□□□ -2
CDC27-211ENST00000570740 C2CD3Q4AC94 2353 aa2.58□□□□□ -2
CDC27-211ENST00000570740 TLN2Q9Y4G6 2542 aa2.58□□□□□ -2
CDC27-211ENST00000570740 TEP1Q99973 2627 aaKnown RBP2.57□□□□□ -2
CDC27-211ENST00000570740 ABCA2Q9BZC7 2435 aa2.57□□□□□ -2
CDC27-211ENST00000570740 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.57□□□□□ -2
CDC27-211ENST00000570740 IGHV3-35A0A0C4DH35 117 aa2.57□□□□□ -2
CDC27-211ENST00000570740 A0A0J9YWU9 116 aa2.57□□□□□ -2
CDC27-211ENST00000570740 IGLV1-47P01700 117 aa2.57□□□□□ -2
CDC27-211ENST00000570740 IGHV3-53P01767 116 aa2.57□□□□□ -2
CDC27-211ENST00000570740 COX6A2Q02221 97 aa2.57□□□□□ -2
CDC27-211ENST00000570740 MINOS1Q5TGZ0 78 aa2.57□□□□□ -2
CDC27-211ENST00000570740 FAM104AQ969W3 186 aa2.57□□□□□ -2
CDC27-211ENST00000570740 SMR3AQ99954 134 aa2.57□□□□□ -2
CDC27-211ENST00000570740 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
CDC27-211ENST00000570740 KCNQ1DNQ9H478 68 aa2.57□□□□□ -2
CDC27-211ENST00000570740 S4R3C0 116 aa2.57□□□□□ -2
CDC27-211ENST00000570740 SETD2Q9BYW2 2564 aaPredicted RBP2.57□□□□□ -2
CDC27-211ENST00000570740 AKAP9Q99996 3911 aa2.57□□□□□ -2
CDC27-211ENST00000570740 CSMD2Q7Z408 3487 aa2.57□□□□□ -2
CDC27-211ENST00000570740 NF1P21359 2839 aa2.57□□□□□ -2
CDC27-211ENST00000570740 WNK2Q9Y3S1 2297 aa2.57□□□□□ -2
CDC27-211ENST00000570740 FN1P02751 2386 aaKnown RBP2.57□□□□□ -2
CDC27-211ENST00000570740 MXRA5Q9NR99 2828 aa2.56□□□□□ -2
CDC27-211ENST00000570740 CCL3L1P16619 93 aa2.56□□□□□ -2
CDC27-211ENST00000570740 PRR9Q5T870 116 aa2.56□□□□□ -2
CDC27-211ENST00000570740 SPAG11AQ6PDA7 123 aa2.56□□□□□ -2
CDC27-211ENST00000570740 DSCAML1Q8TD84 2053 aa2.56□□□□□ -2
CDC27-211ENST00000570740 IGLV7-46A0A075B6I9 117 aa2.55□□□□□ -2
CDC27-211ENST00000570740 PRB4P10163 310 aaPredicted RBP2.55□□□□□ -2
CDC27-211ENST00000570740 SONP18583 2426 aaKnown RBP2.55□□□□□ -2
CDC27-211ENST00000570740 DSCR10P59022 87 aa2.55□□□□□ -2
CDC27-211ENST00000570740 LYPD2Q6UXB3 125 aa2.55□□□□□ -2
CDC27-211ENST00000570740 MINOS1-NBL1R4GNA1 71 aa2.55□□□□□ -2
CDC27-211ENST00000570740 IGLV4-60A0A075B6I1 120 aa2.54□□□□□ -2
CDC27-211ENST00000570740 IGHV3-66A0A0C4DH42 116 aa2.54□□□□□ -2
CDC27-211ENST00000570740 H0Y9P7 68 aa2.54□□□□□ -2
CDC27-211ENST00000570740 IGHV3-23P01764 117 aa2.54□□□□□ -2
CDC27-211ENST00000570740 USMG5Q96IX5 58 aa2.54□□□□□ -2
CDC27-211ENST00000570740 ZNF702PQ9H963 129 aa2.54□□□□□ -2
CDC27-211ENST00000570740 PLAC8Q9NZF1 115 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 143.9 ms