RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 IGKV2D-28P01615 120 aa4□□□□□ -1.77
CYLD-216ENST00000569891 KRTAP26-1Q6PEX3 210 aa4□□□□□ -1.77
CYLD-216ENST00000569891 LECT2O14960 151 aa4□□□□□ -1.77
CYLD-216ENST00000569891 PRO0461Q9UI25 63 aa4□□□□□ -1.77
CYLD-216ENST00000569891 PRYO14603 147 aa4□□□□□ -1.77
CYLD-216ENST00000569891 C9orf116Q5BN46 136 aaPredicted RBP4□□□□□ -1.77
CYLD-216ENST00000569891 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4□□□□□ -1.77
CYLD-216ENST00000569891 C10orf25Q5T742 122 aa4□□□□□ -1.77
CYLD-216ENST00000569891 WWC2-AS2Q96NR7 200 aa4□□□□□ -1.77
CYLD-216ENST00000569891 DHRS4-AS1Q9P1J3 65 aa4□□□□□ -1.77
CYLD-216ENST00000569891 STAB1Q9NY15 2570 aa3.99□□□□□ -1.77
CYLD-216ENST00000569891 ETDCA0A1B0GVM5 59 aa3.99□□□□□ -1.77
CYLD-216ENST00000569891 ZNF73O43830 326 aaPredicted RBP3.99□□□□□ -1.77
CYLD-216ENST00000569891 IGLV6-57P01721 117 aa3.99□□□□□ -1.77
CYLD-216ENST00000569891 CNBPP62633 177 aaKnown RBP3.99□□□□□ -1.77
CYLD-216ENST00000569891 GAGE2BQ13066 116 aa3.99□□□□□ -1.77
CYLD-216ENST00000569891 C6orf99Q4VX62 202 aa3.99□□□□□ -1.77
CYLD-216ENST00000569891 XAGE1AQ9HD64 81 aa3.99□□□□□ -1.77
CYLD-216ENST00000569891 FAM240AA0A1B0GVK7 77 aa3.99□□□□□ -1.77
CYLD-216ENST00000569891 LINC00526Q96FQ7 95 aa3.99□□□□□ -1.77
CYLD-216ENST00000569891 SIGMAR1Q99720 223 aa3.98□□□□□ -1.77
CYLD-216ENST00000569891 IGLV5-37A0A075B6J1 123 aa3.98□□□□□ -1.77
CYLD-216ENST00000569891 C3orf84H3BNL1 204 aa3.98□□□□□ -1.77
CYLD-216ENST00000569891 Q8N814 137 aa3.98□□□□□ -1.77
CYLD-216ENST00000569891 EIF4EBP3O60516 100 aaPredicted RBP3.98□□□□□ -1.77
CYLD-216ENST00000569891 VPREB1P12018 145 aa3.98□□□□□ -1.77
CYLD-216ENST00000569891 COL6A5A8TX70 2615 aa3.98□□□□□ -1.77
CYLD-216ENST00000569891 LAMTOR3Q9UHA4 124 aa3.97□□□□□ -1.77
CYLD-216ENST00000569891 TRBV10-3A0A0K0K1G6 114 aa3.97□□□□□ -1.77
CYLD-216ENST00000569891 C16orf90A8MZG2 172 aa3.97□□□□□ -1.77
CYLD-216ENST00000569891 LINC00575Q6W349 94 aa3.97□□□□□ -1.77
CYLD-216ENST00000569891 MTURNQ8N3F0 131 aa3.97□□□□□ -1.77
CYLD-216ENST00000569891 DSCR8Q96T75 97 aa3.96□□□□□ -1.78
CYLD-216ENST00000569891 C1orf134Q5TEV5 83 aa3.96□□□□□ -1.78
CYLD-216ENST00000569891 ELOF1P60002 83 aaKnown RBP3.95□□□□□ -1.78
CYLD-216ENST00000569891 MRPL55Q7Z7F7 128 aaKnown RBP3.95□□□□□ -1.78
CYLD-216ENST00000569891 F8WEM9 126 aa3.95□□□□□ -1.78
CYLD-216ENST00000569891 UBE2BP63146 152 aa3.95□□□□□ -1.78
CYLD-216ENST00000569891 Q6ZRP5 223 aa3.95□□□□□ -1.78
CYLD-216ENST00000569891 LINC00167Q96N53 147 aa3.95□□□□□ -1.78
CYLD-216ENST00000569891 KCNQ1DNQ9H478 68 aa3.95□□□□□ -1.78
CYLD-216ENST00000569891 SMCPP49901 116 aaPredicted RBP3.95□□□□□ -1.78
CYLD-216ENST00000569891 RBM3P98179 157 aaKnown RBP3.95□□□□□ -1.78
CYLD-216ENST00000569891 CDK2AP2O75956 126 aa3.94□□□□□ -1.78
CYLD-216ENST00000569891 A0A087WYN8 130 aa3.94□□□□□ -1.78
CYLD-216ENST00000569891 MUC17Q685J3 4493 aa3.94□□□□□ -1.78
CYLD-216ENST00000569891 PRR3P79522 188 aaKnown RBP3.94□□□□□ -1.78
CYLD-216ENST00000569891 GAGE2AQ6NT46 116 aa3.94□□□□□ -1.78
CYLD-216ENST00000569891 C9orf163Q8N9P6 203 aa3.94□□□□□ -1.78
CYLD-216ENST00000569891 TEX49A0A1B0GTD5 131 aa3.93□□□□□ -1.78
CYLD-216ENST00000569891 C7orf33Q8WU49 177 aa3.93□□□□□ -1.78
CYLD-216ENST00000569891 C22orf24Q9Y442 160 aa3.93□□□□□ -1.78
CYLD-216ENST00000569891 A0A1B0GW54 56 aa3.93□□□□□ -1.78
CYLD-216ENST00000569891 REG3GQ6UW15 175 aa3.93□□□□□ -1.78
CYLD-216ENST00000569891 FAM19A5Q7Z5A7 132 aaPredicted RBP3.93□□□□□ -1.78
CYLD-216ENST00000569891 UBL5Q9BZL1 73 aa3.93□□□□□ -1.78
CYLD-216ENST00000569891 LY6G6CO95867 125 aa3.92□□□□□ -1.78
CYLD-216ENST00000569891 ATP5EP2Q5VTU8 51 aa3.92□□□□□ -1.78
CYLD-216ENST00000569891 Q6ZQY7 126 aa3.92□□□□□ -1.78
CYLD-216ENST00000569891 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.92□□□□□ -1.78
CYLD-216ENST00000569891 LINC00643Q86TS7 51 aa3.92□□□□□ -1.78
CYLD-216ENST00000569891 IGKV2-24A0A0C4DH68 120 aa3.92□□□□□ -1.78
CYLD-216ENST00000569891 C9orf129Q5T035 196 aaKnown RBP3.92□□□□□ -1.78
CYLD-216ENST00000569891 FAM218AQ96MZ4 157 aa3.92□□□□□ -1.78
CYLD-216ENST00000569891 RPL37AP8A6NKH3 93 aa3.92□□□□□ -1.78
CYLD-216ENST00000569891 IGLV1-50A0A075B6I6 118 aa3.91□□□□□ -1.78
CYLD-216ENST00000569891 IMUPQ9GZP8 106 aa3.91□□□□□ -1.78
CYLD-216ENST00000569891 MGAM2Q2M2H8 2515 aa3.91□□□□□ -1.78
CYLD-216ENST00000569891 Q6ZRX8 168 aa3.91□□□□□ -1.78
CYLD-216ENST00000569891 ZNF706Q9Y5V0 76 aaPredicted RBP3.91□□□□□ -1.78
CYLD-216ENST00000569891 FUSP35637 526 aaKnown RBP eCLIP3.91□□□□□ -1.78
CYLD-216ENST00000569891 UBE2AP49459 152 aa3.91□□□□□ -1.78
CYLD-216ENST00000569891 CCKP06307 115 aa3.9□□□□□ -1.78
CYLD-216ENST00000569891 A0A087WTM6 91 aa3.9□□□□□ -1.79
CYLD-216ENST00000569891 M0R2N4 97 aa3.9□□□□□ -1.79
CYLD-216ENST00000569891 IGLV5-52A0A0A0MRZ9 124 aa3.9□□□□□ -1.79
CYLD-216ENST00000569891 NDUFV3P56181 108 aaKnown RBP3.9□□□□□ -1.79
CYLD-216ENST00000569891 FAM19A1Q7Z5A9 133 aa3.9□□□□□ -1.79
CYLD-216ENST00000569891 Q6Q795 121 aa3.89□□□□□ -1.79
CYLD-216ENST00000569891 LOC110117498A0A087WWA1 95 aa3.89□□□□□ -1.79
CYLD-216ENST00000569891 C14orf132Q9NPU4 83 aa3.89□□□□□ -1.79
CYLD-216ENST00000569891 SLPIP03973 132 aa3.89□□□□□ -1.79
CYLD-216ENST00000569891 A0A096LNI7 61 aa3.89□□□□□ -1.79
CYLD-216ENST00000569891 H0Y9J4 135 aa3.89□□□□□ -1.79
CYLD-216ENST00000569891 CASC10Q5T4H9 136 aa3.89□□□□□ -1.79
CYLD-216ENST00000569891 LINC00476Q8WZB0 136 aa3.89□□□□□ -1.79
CYLD-216ENST00000569891 OBSCN-AS1Q96MR7 158 aa3.89□□□□□ -1.79
CYLD-216ENST00000569891 SERTAD4-AS1Q5TG53 156 aa3.88□□□□□ -1.79
CYLD-216ENST00000569891 HMCN2Q8NDA2 5059 aa3.88□□□□□ -1.79
CYLD-216ENST00000569891 SPRR1AP35321 89 aa3.88□□□□□ -1.79
CYLD-216ENST00000569891 Q6ZR54 194 aa3.88□□□□□ -1.79
CYLD-216ENST00000569891 KRTAP1-5Q9BYS1 174 aa3.88□□□□□ -1.79
CYLD-216ENST00000569891 LRCOL1A6NCL2 159 aa3.88□□□□□ -1.79
CYLD-216ENST00000569891 RTL8CO15255 209 aa3.88□□□□□ -1.79
CYLD-216ENST00000569891 TNP2Q05952 138 aa3.88□□□□□ -1.79
CYLD-216ENST00000569891 B5MCH6 92 aa3.87□□□□□ -1.79
CYLD-216ENST00000569891 NOTCH1P46531 2555 aa3.87□□□□□ -1.79
CYLD-216ENST00000569891 Q6JHZ5 121 aa3.87□□□□□ -1.79
CYLD-216ENST00000569891 A0A1B0GV72 72 aa3.86□□□□□ -1.79
CYLD-216ENST00000569891 RNF213Q63HN8 5207 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms