RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 KCNQ1DNQ9H478 68 aa7.98□□□□□ -1.13
GTF3C1-211ENST00000569653 TIMM17BO60830 172 aa7.97□□□□□ -1.13
GTF3C1-211ENST00000569653 JOSD1Q15040 202 aaPredicted RBP7.97□□□□□ -1.13
GTF3C1-211ENST00000569653 LINC00337Q8N6G1 96 aa7.97□□□□□ -1.13
GTF3C1-211ENST00000569653 ETDCA0A1B0GVM5 59 aa7.96□□□□□ -1.14
GTF3C1-211ENST00000569653 DDTP30046 118 aa7.96□□□□□ -1.14
GTF3C1-211ENST00000569653 SPRR1AP35321 89 aa7.96□□□□□ -1.14
GTF3C1-211ENST00000569653 NPC2P61916 151 aa7.96□□□□□ -1.14
GTF3C1-211ENST00000569653 HIGD2AQ9BW72 106 aa7.96□□□□□ -1.14
GTF3C1-211ENST00000569653 S100A7L2Q5SY68 101 aa7.95□□□□□ -1.14
GTF3C1-211ENST00000569653 PYY3Q5JQD4 70 aa7.94□□□□□ -1.14
GTF3C1-211ENST00000569653 LCE2AQ5TA79 106 aaPredicted RBP7.94□□□□□ -1.14
GTF3C1-211ENST00000569653 SCGB1D4Q6XE38 83 aa7.93□□□□□ -1.14
GTF3C1-211ENST00000569653 LINC00308Q8TCZ7 52 aa7.93□□□□□ -1.14
GTF3C1-211ENST00000569653 SPRR4Q96PI1 79 aa7.93□□□□□ -1.14
GTF3C1-211ENST00000569653 SPANXCQ9NY87 97 aa7.93□□□□□ -1.14
GTF3C1-211ENST00000569653 ZNF706Q9Y5V0 76 aaPredicted RBP7.93□□□□□ -1.14
GTF3C1-211ENST00000569653 HSBP1L1C9JCN9 74 aa7.92□□□□□ -1.14
GTF3C1-211ENST00000569653 KRTAP4-16G5E9R7 235 aaPredicted RBP7.92□□□□□ -1.14
GTF3C1-211ENST00000569653 IGLV6-57P01721 117 aa7.92□□□□□ -1.14
GTF3C1-211ENST00000569653 CBY1Q9Y3M2 126 aa7.92□□□□□ -1.14
GTF3C1-211ENST00000569653 TRAV23DV6A0A075B6W5 121 aa7.91□□□□□ -1.14
GTF3C1-211ENST00000569653 SPANXDQ9BXN6 97 aa7.91□□□□□ -1.14
GTF3C1-211ENST00000569653 IGLV7-46A0A075B6I9 117 aa7.9□□□□□ -1.14
GTF3C1-211ENST00000569653 TPRXLQ17RH7 258 aa7.9□□□□□ -1.14
GTF3C1-211ENST00000569653 COPS9Q8WXC6 57 aa7.9□□□□□ -1.14
GTF3C1-211ENST00000569653 PAM16Q9Y3D7 125 aa7.9□□□□□ -1.14
GTF3C1-211ENST00000569653 B5MCH6 92 aa7.89□□□□□ -1.15
GTF3C1-211ENST00000569653 COX8AP10176 69 aa7.88□□□□□ -1.15
GTF3C1-211ENST00000569653 SPATA45Q537H7 98 aa7.88□□□□□ -1.15
GTF3C1-211ENST00000569653 Q6ZRX8 168 aa7.88□□□□□ -1.15
GTF3C1-211ENST00000569653 SMCR5Q8TEV8 140 aa7.88□□□□□ -1.15
GTF3C1-211ENST00000569653 C14orf144Q96I85 54 aa7.88□□□□□ -1.15
GTF3C1-211ENST00000569653 ZNF73O43830 326 aaPredicted RBP7.87□□□□□ -1.15
GTF3C1-211ENST00000569653 Q6ZVH6 145 aa7.87□□□□□ -1.15
GTF3C1-211ENST00000569653 OR13C6PQ8NH95 151 aa7.87□□□□□ -1.15
GTF3C1-211ENST00000569653 VAMP8Q9BV40 100 aa7.87□□□□□ -1.15
GTF3C1-211ENST00000569653 DLEU1O43261 78 aa7.86□□□□□ -1.15
GTF3C1-211ENST00000569653 HINT1P49773 126 aaPredicted RBP7.86□□□□□ -1.15
GTF3C1-211ENST00000569653 LINC00518Q8N0U6 118 aa7.86□□□□□ -1.15
GTF3C1-211ENST00000569653 ERC2-IT1O76042 136 aa7.85□□□□□ -1.15
GTF3C1-211ENST00000569653 IFITM1P13164 125 aa7.85□□□□□ -1.15
GTF3C1-211ENST00000569653 MUSTN1Q8IVN3 82 aa7.85□□□□□ -1.15
GTF3C1-211ENST00000569653 Q8NBF4 154 aa7.85□□□□□ -1.15
GTF3C1-211ENST00000569653 KRTAP9-2Q9BYQ4 174 aa7.85□□□□□ -1.15
GTF3C1-211ENST00000569653 CDIP1Q9H305 208 aa7.85□□□□□ -1.15
GTF3C1-211ENST00000569653 PPDPFQ9H3Y8 114 aa7.85□□□□□ -1.15
GTF3C1-211ENST00000569653 CTAG1AP78358 180 aa7.84□□□□□ -1.15
GTF3C1-211ENST00000569653 Q9BRP9 147 aa7.84□□□□□ -1.15
GTF3C1-211ENST00000569653 LINC00483Q53H64 154 aa7.83□□□□□ -1.16
GTF3C1-211ENST00000569653 C2orf91Q6ZV80 131 aa7.83□□□□□ -1.16
GTF3C1-211ENST00000569653 A0A0U1RQV1 116 aa7.82□□□□□ -1.16
GTF3C1-211ENST00000569653 KRTAP13-3Q3SY46 172 aa7.81□□□□□ -1.16
GTF3C1-211ENST00000569653 GAGE2AQ6NT46 116 aa7.81□□□□□ -1.16
GTF3C1-211ENST00000569653 SPAG11AQ6PDA7 123 aa7.81□□□□□ -1.16
GTF3C1-211ENST00000569653 SLC25A34Q6PIV7 304 aa7.8□□□□□ -1.16
GTF3C1-211ENST00000569653 KRTAP4-1Q9BYQ7 146 aa7.8□□□□□ -1.16
GTF3C1-211ENST00000569653 LOC105371267A0A1B0GV96 52 aa7.79□□□□□ -1.16
GTF3C1-211ENST00000569653 HIGD1BQ9P298 99 aa7.79□□□□□ -1.16
GTF3C1-211ENST00000569653 A6NDN8 102 aa7.78□□□□□ -1.16
GTF3C1-211ENST00000569653 FP248Q71RG6 208 aaPredicted RBP7.78□□□□□ -1.16
GTF3C1-211ENST00000569653 DHRS4-AS1Q9P1J3 65 aa7.78□□□□□ -1.16
GTF3C1-211ENST00000569653 A4D1N5 150 aa7.77□□□□□ -1.17
GTF3C1-211ENST00000569653 ELOF1P60002 83 aaKnown RBP7.77□□□□□ -1.17
GTF3C1-211ENST00000569653 MOBPQ13875 183 aa7.77□□□□□ -1.17
GTF3C1-211ENST00000569653 C6orf99Q4VX62 202 aa7.77□□□□□ -1.17
GTF3C1-211ENST00000569653 TRAV13-2A0A0B4J235 113 aa7.76□□□□□ -1.17
GTF3C1-211ENST00000569653 COX7BP24311 80 aa7.76□□□□□ -1.17
GTF3C1-211ENST00000569653 C4orf48Q5BLP8 95 aa7.76□□□□□ -1.17
GTF3C1-211ENST00000569653 HIST1H4GQ99525 98 aa7.76□□□□□ -1.17
GTF3C1-211ENST00000569653 IGLV9-49A0A0B4J1Y8 123 aa7.75□□□□□ -1.17
GTF3C1-211ENST00000569653 TRBV7-6A0A0J9YX20 115 aa7.75□□□□□ -1.17
GTF3C1-211ENST00000569653 A0A1B0GWB2 263 aa7.74□□□□□ -1.17
GTF3C1-211ENST00000569653 Q8N377 158 aa7.74□□□□□ -1.17
GTF3C1-211ENST00000569653 SPINK1P00995 79 aa7.73□□□□□ -1.17
GTF3C1-211ENST00000569653 ST20-AS1Q8NBB2 130 aa7.73□□□□□ -1.17
GTF3C1-211ENST00000569653 SMIM6P0DI80 62 aa7.72□□□□□ -1.17
GTF3C1-211ENST00000569653 ASB16-AS1Q495Z4 193 aa7.72□□□□□ -1.17
GTF3C1-211ENST00000569653 C9orf153Q5TBE3 101 aa7.72□□□□□ -1.17
GTF3C1-211ENST00000569653 SSBP3-AS1Q7Z2R9 100 aa7.72□□□□□ -1.17
GTF3C1-211ENST00000569653 C12orf57Q99622 126 aa7.72□□□□□ -1.17
GTF3C1-211ENST00000569653 CFC1BP0CG36 223 aa7.7□□□□□ -1.18
GTF3C1-211ENST00000569653 CFC1P0CG37 223 aa7.7□□□□□ -1.18
GTF3C1-211ENST00000569653 SPRR1BP22528 89 aa7.7□□□□□ -1.18
GTF3C1-211ENST00000569653 TAL2Q16559 108 aa7.7□□□□□ -1.18
GTF3C1-211ENST00000569653 CEND1Q8N111 149 aa7.7□□□□□ -1.18
GTF3C1-211ENST00000569653 SMIM11BQ8TCY0 68 aa7.7□□□□□ -1.18
GTF3C1-211ENST00000569653 UQCR10Q9UDW1 63 aa7.7□□□□□ -1.18
GTF3C1-211ENST00000569653 PRO1933Q9H354 126 aa7.69□□□□□ -1.18
GTF3C1-211ENST00000569653 NHP2Q9NX24 153 aaKnown RBP7.69□□□□□ -1.18
GTF3C1-211ENST00000569653 FXYD2P54710 66 aa7.68□□□□□ -1.18
GTF3C1-211ENST00000569653 RPS29P62273 56 aaKnown RBP7.68□□□□□ -1.18
GTF3C1-211ENST00000569653 LAMTOR3Q9UHA4 124 aa7.67□□□□□ -1.18
GTF3C1-211ENST00000569653 TEX49A0A1B0GTD5 131 aa7.66□□□□□ -1.18
GTF3C1-211ENST00000569653 HSD52Q0P140 79 aa7.66□□□□□ -1.18
GTF3C1-211ENST00000569653 VAMP3Q15836 100 aa7.66□□□□□ -1.18
GTF3C1-211ENST00000569653 A0A0B4J2C4 111 aa7.65□□□□□ -1.18
GTF3C1-211ENST00000569653 DEFB105AQ8NG35 78 aa7.65□□□□□ -1.18
GTF3C1-211ENST00000569653 SLC25A20O43772 301 aa7.64□□□□□ -1.19
GTF3C1-211ENST00000569653 XP32Q5T750 250 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms