RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 LRCOL1A6NCL2 159 aa3.95□□□□□ -1.78
CAPN3-218ENST00000568153 VPREB1P12018 145 aa3.95□□□□□ -1.78
CAPN3-218ENST00000568153 WFDC2Q14508 124 aa3.95□□□□□ -1.78
CAPN3-218ENST00000568153 LINC01620Q4KN68 170 aa3.95□□□□□ -1.78
CAPN3-218ENST00000568153 C9orf129Q5T035 196 aaKnown RBP3.95□□□□□ -1.78
CAPN3-218ENST00000568153 Q6ZRN7 208 aaPredicted RBP3.95□□□□□ -1.78
CAPN3-218ENST00000568153 Q8NDZ9 215 aa3.95□□□□□ -1.78
CAPN3-218ENST00000568153 LST1O00453 97 aa3.94□□□□□ -1.78
CAPN3-218ENST00000568153 IGLV6-57P01721 117 aa3.94□□□□□ -1.78
CAPN3-218ENST00000568153 TRACP01848 142 aa3.94□□□□□ -1.78
CAPN3-218ENST00000568153 KRTAP10-6P60371 365 aaPredicted RBP3.94□□□□□ -1.78
CAPN3-218ENST00000568153 NKAPP1Q8N9T2 125 aa3.94□□□□□ -1.78
CAPN3-218ENST00000568153 CLEC2BQ92478 149 aa3.94□□□□□ -1.78
CAPN3-218ENST00000568153 PRO0461Q9UI25 63 aa3.94□□□□□ -1.78
CAPN3-218ENST00000568153 PKIGQ9Y2B9 76 aa3.94□□□□□ -1.78
CAPN3-218ENST00000568153 STAB2Q8WWQ8 2551 aa3.94□□□□□ -1.78
CAPN3-218ENST00000568153 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.93□□□□□ -1.78
CAPN3-218ENST00000568153 TRBV10-3A0A0K0K1G6 114 aa3.93□□□□□ -1.78
CAPN3-218ENST00000568153 C16orf90A8MZG2 172 aa3.93□□□□□ -1.78
CAPN3-218ENST00000568153 C9JAW5 83 aa3.93□□□□□ -1.78
CAPN3-218ENST00000568153 M0QXV9 152 aa3.93□□□□□ -1.78
CAPN3-218ENST00000568153 C9orf163Q8N9P6 203 aa3.93□□□□□ -1.78
CAPN3-218ENST00000568153 DPH3Q96FX2 82 aa3.93□□□□□ -1.78
CAPN3-218ENST00000568153 A0A087WTM6 91 aa3.92□□□□□ -1.78
CAPN3-218ENST00000568153 TRBV7-6A0A0J9YX20 115 aa3.92□□□□□ -1.78
CAPN3-218ENST00000568153 A0A1B0GX51 115 aa3.92□□□□□ -1.78
CAPN3-218ENST00000568153 SLC25A20O43772 301 aa3.92□□□□□ -1.78
CAPN3-218ENST00000568153 BAALC-AS2P0C853 105 aa3.92□□□□□ -1.78
CAPN3-218ENST00000568153 LINC01547P58512 204 aaPredicted RBP3.92□□□□□ -1.78
CAPN3-218ENST00000568153 C6orf99Q4VX62 202 aa3.92□□□□□ -1.78
CAPN3-218ENST00000568153 GAGE2AQ6NT46 116 aa3.92□□□□□ -1.78
CAPN3-218ENST00000568153 ANKRD29Q8N6D5 301 aa3.92□□□□□ -1.78
CAPN3-218ENST00000568153 Q8N814 137 aa3.92□□□□□ -1.78
CAPN3-218ENST00000568153 LINC00474Q9P2X8 69 aa3.92□□□□□ -1.78
CAPN3-218ENST00000568153 C22orf24Q9Y442 160 aa3.92□□□□□ -1.78
CAPN3-218ENST00000568153 TRAV23DV6A0A075B6W5 121 aa3.91□□□□□ -1.78
CAPN3-218ENST00000568153 ZNF73O43830 326 aaPredicted RBP3.91□□□□□ -1.78
CAPN3-218ENST00000568153 MT3P25713 68 aa3.91□□□□□ -1.78
CAPN3-218ENST00000568153 LINC00575Q6W349 94 aa3.91□□□□□ -1.78
CAPN3-218ENST00000568153 SDIM1Q6ZPB5 146 aa3.91□□□□□ -1.78
CAPN3-218ENST00000568153 MTURNQ8N3F0 131 aa3.91□□□□□ -1.78
CAPN3-218ENST00000568153 C7orf33Q8WU49 177 aa3.91□□□□□ -1.78
CAPN3-218ENST00000568153 DIRC1Q969H9 104 aa3.91□□□□□ -1.78
CAPN3-218ENST00000568153 LINC01600Q96MT4 127 aa3.91□□□□□ -1.78
CAPN3-218ENST00000568153 FAM218AQ96MZ4 157 aa3.91□□□□□ -1.78
CAPN3-218ENST00000568153 KCNQ1DNQ9H478 68 aa3.91□□□□□ -1.78
CAPN3-218ENST00000568153 DYNC2H1Q8NCM8 4307 aaKnown RBP3.91□□□□□ -1.78
CAPN3-218ENST00000568153 IGLV1-50A0A075B6I6 118 aa3.9□□□□□ -1.79
CAPN3-218ENST00000568153 A0A096LNI7 61 aa3.9□□□□□ -1.79
CAPN3-218ENST00000568153 IGKV2-24A0A0C4DH68 120 aa3.9□□□□□ -1.79
CAPN3-218ENST00000568153 hADV29S1A0JD25 119 aa3.9□□□□□ -1.79
CAPN3-218ENST00000568153 FAM168BA1KXE4 195 aa3.9□□□□□ -1.79
CAPN3-218ENST00000568153 H3BT86 120 aa3.9□□□□□ -1.79
CAPN3-218ENST00000568153 DNAL4O96015 105 aa3.9□□□□□ -1.79
CAPN3-218ENST00000568153 COX7BP24311 80 aa3.9□□□□□ -1.79
CAPN3-218ENST00000568153 ETDBQ3ZM63 59 aa3.9□□□□□ -1.79
CAPN3-218ENST00000568153 LINC00167Q96N53 147 aa3.9□□□□□ -1.79
CAPN3-218ENST00000568153 PRKDCP78527 4128 aaKnown RBP3.89□□□□□ -1.79
CAPN3-218ENST00000568153 A0A1W2PNN7 141 aa3.89□□□□□ -1.79
CAPN3-218ENST00000568153 RPL37AP8A6NKH3 93 aa3.89□□□□□ -1.79
CAPN3-218ENST00000568153 H3BQ85 93 aa3.89□□□□□ -1.79
CAPN3-218ENST00000568153 J3QR89 54 aa3.89□□□□□ -1.79
CAPN3-218ENST00000568153 K7ERU9 68 aa3.89□□□□□ -1.79
CAPN3-218ENST00000568153 INAFM2P0DMQ5 153 aa3.89□□□□□ -1.79
CAPN3-218ENST00000568153 OCIAD2Q56VL3 154 aa3.89□□□□□ -1.79
CAPN3-218ENST00000568153 FAM19A5Q7Z5A7 132 aaPredicted RBP3.89□□□□□ -1.79
CAPN3-218ENST00000568153 MRPL55Q7Z7F7 128 aaKnown RBP3.89□□□□□ -1.79
CAPN3-218ENST00000568153 TEN1Q86WV5 123 aa3.89□□□□□ -1.79
CAPN3-218ENST00000568153 BIRC6Q9NR09 4857 aa3.88□□□□□ -1.79
CAPN3-218ENST00000568153 KRTAP10-7P60409 375 aaPredicted RBP3.88□□□□□ -1.79
CAPN3-218ENST00000568153 KRTAP7-1Q8IUC3 87 aa3.88□□□□□ -1.79
CAPN3-218ENST00000568153 PPDPFLQ8WWR9 84 aa3.88□□□□□ -1.79
CAPN3-218ENST00000568153 ORMDL1Q9P0S3 153 aa3.88□□□□□ -1.79
CAPN3-218ENST00000568153 CSMD3Q7Z407 3707 aa3.87□□□□□ -1.79
CAPN3-218ENST00000568153 TMEM256-PLSCR3K7ERE1 68 aa3.87□□□□□ -1.79
CAPN3-218ENST00000568153 RTL8CO15255 209 aa3.87□□□□□ -1.79
CAPN3-218ENST00000568153 ELOF1P60002 83 aaKnown RBP3.87□□□□□ -1.79
CAPN3-218ENST00000568153 ETDCA0A1B0GVM5 59 aa3.86□□□□□ -1.79
CAPN3-218ENST00000568153 REG3GQ6UW15 175 aa3.86□□□□□ -1.79
CAPN3-218ENST00000568153 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.86□□□□□ -1.79
CAPN3-218ENST00000568153 DHRS4-AS1Q9P1J3 65 aa3.86□□□□□ -1.79
CAPN3-218ENST00000568153 DNAH7Q8WXX0 4024 aa3.86□□□□□ -1.79
CAPN3-218ENST00000568153 PLECQ15149 4684 aaKnown RBP3.86□□□□□ -1.79
CAPN3-218ENST00000568153 TENM2Q9NT68 2774 aa3.85□□□□□ -1.79
CAPN3-218ENST00000568153 TEX49A0A1B0GTD5 131 aa3.85□□□□□ -1.79
CAPN3-218ENST00000568153 CHTF8P0CG12 524 aa3.85□□□□□ -1.79
CAPN3-218ENST00000568153 SPRR1AP35321 89 aa3.85□□□□□ -1.79
CAPN3-218ENST00000568153 UBE2BP63146 152 aa3.85□□□□□ -1.79
CAPN3-218ENST00000568153 EPM2AB3EWF7 344 aa3.84□□□□□ -1.79
CAPN3-218ENST00000568153 KRTAP4-16G5E9R7 235 aaPredicted RBP3.84□□□□□ -1.79
CAPN3-218ENST00000568153 FUSP35637 526 aaKnown RBP eCLIP3.84□□□□□ -1.79
CAPN3-218ENST00000568153 Q6ZQY7 126 aa3.84□□□□□ -1.79
CAPN3-218ENST00000568153 PHF5AQ7RTV0 110 aaKnown RBP3.84□□□□□ -1.79
CAPN3-218ENST00000568153 SPACA4Q8TDM5 124 aa3.84□□□□□ -1.79
CAPN3-218ENST00000568153 STARD9Q9P2P6 4700 aa3.84□□□□□ -1.79
CAPN3-218ENST00000568153 DNAH1Q9P2D7 4330 aa3.84□□□□□ -1.79
CAPN3-218ENST00000568153 LCE6AA0A183 80 aa3.83□□□□□ -1.8
CAPN3-218ENST00000568153 JMJD7-PLA2G4BH0Y9G9 81 aa3.83□□□□□ -1.8
CAPN3-218ENST00000568153 PANO1I0J062 215 aa3.83□□□□□ -1.8
CAPN3-218ENST00000568153 Q6ZRX8 168 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms