RNA–Protein interactions for RNA: ENST00000567674.1

CDH3-206, Transcript of cadherin 3, humanhuman

TSL 3

Gene CDH3, Length 892 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-206ENST00000567674 Q6ZRX8 168 aa6.49□□□□□ -1.37
CDH3-206ENST00000567674 SSBP3-AS1Q7Z2R9 100 aa6.49□□□□□ -1.37
CDH3-206ENST00000567674 SMCR5Q8TEV8 140 aa6.49□□□□□ -1.37
CDH3-206ENST00000567674 COPS9Q8WXC6 57 aa6.49□□□□□ -1.37
CDH3-206ENST00000567674 ANAPC11Q9NYG5 84 aa6.49□□□□□ -1.37
CDH3-206ENST00000567674 SPINK1P00995 79 aa6.48□□□□□ -1.37
CDH3-206ENST00000567674 C4orf48Q5BLP8 95 aa6.48□□□□□ -1.37
CDH3-206ENST00000567674 FP248Q71RG6 208 aaPredicted RBP6.48□□□□□ -1.37
CDH3-206ENST00000567674 LINC00518Q8N0U6 118 aa6.48□□□□□ -1.37
CDH3-206ENST00000567674 SPANXCQ9NY87 97 aa6.48□□□□□ -1.37
CDH3-206ENST00000567674 Q6ZVH6 145 aa6.47□□□□□ -1.37
CDH3-206ENST00000567674 SNRPEP62304 92 aaKnown RBP6.46□□□□□ -1.38
CDH3-206ENST00000567674 PMCHL2Q9BQD1 86 aa6.46□□□□□ -1.38
CDH3-206ENST00000567674 TRAV23DV6A0A075B6W5 121 aa6.45□□□□□ -1.38
CDH3-206ENST00000567674 C20orf202A1L168 122 aa6.45□□□□□ -1.38
CDH3-206ENST00000567674 ZNF73O43830 326 aaPredicted RBP6.45□□□□□ -1.38
CDH3-206ENST00000567674 DAND5Q8N907 189 aa6.45□□□□□ -1.38
CDH3-206ENST00000567674 ADAMTSL4-AS1Q5T5F5 129 aa6.44□□□□□ -1.38
CDH3-206ENST00000567674 SLC25A34Q6PIV7 304 aa6.44□□□□□ -1.38
CDH3-206ENST00000567674 C3orf22Q8N5N4 141 aa6.44□□□□□ -1.38
CDH3-206ENST00000567674 LINC00308Q8TCZ7 52 aa6.44□□□□□ -1.38
CDH3-206ENST00000567674 LITAFQ99732 161 aa6.44□□□□□ -1.38
CDH3-206ENST00000567674 SPANXDQ9BXN6 97 aa6.44□□□□□ -1.38
CDH3-206ENST00000567674 FSIP2Q5CZC0 6907 aa6.43□□□□□ -1.38
CDH3-206ENST00000567674 TRBV7-6A0A0J9YX20 115 aa6.43□□□□□ -1.38
CDH3-206ENST00000567674 C3orf79P0CE67 100 aa6.43□□□□□ -1.38
CDH3-206ENST00000567674 IFITM1P13164 125 aa6.43□□□□□ -1.38
CDH3-206ENST00000567674 DHRS4-AS1Q9P1J3 65 aa6.43□□□□□ -1.38
CDH3-206ENST00000567674 IGLV7-46A0A075B6I9 117 aa6.42□□□□□ -1.38
CDH3-206ENST00000567674 ZNF815PA8K554 130 aa6.42□□□□□ -1.38
CDH3-206ENST00000567674 SOSTDC1Q6X4U4 206 aa6.42□□□□□ -1.38
CDH3-206ENST00000567674 Q9BRP9 147 aa6.42□□□□□ -1.38
CDH3-206ENST00000567674 CRCT1Q9UGL9 99 aa6.42□□□□□ -1.38
CDH3-206ENST00000567674 SPRR1BP22528 89 aa6.4□□□□□ -1.38
CDH3-206ENST00000567674 GAGE2AQ6NT46 116 aa6.4□□□□□ -1.38
CDH3-206ENST00000567674 Q8NBF4 154 aa6.4□□□□□ -1.38
CDH3-206ENST00000567674 CDIP1Q9H305 208 aa6.39□□□□□ -1.39
CDH3-206ENST00000567674 A4D1N5 150 aa6.38□□□□□ -1.39
CDH3-206ENST00000567674 SLC25A20O43772 301 aa6.38□□□□□ -1.39
CDH3-206ENST00000567674 ERC2-IT1O76042 136 aa6.38□□□□□ -1.39
CDH3-206ENST00000567674 KRTDAPP60985 99 aa6.38□□□□□ -1.39
CDH3-206ENST00000567674 SCGB1D4Q6XE38 83 aa6.38□□□□□ -1.39
CDH3-206ENST00000567674 EIF4EBP3O60516 100 aaPredicted RBP6.37□□□□□ -1.39
CDH3-206ENST00000567674 S100A1P23297 94 aa6.37□□□□□ -1.39
CDH3-206ENST00000567674 OR13C6PQ8NH95 151 aa6.37□□□□□ -1.39
CDH3-206ENST00000567674 ELOF1P60002 83 aaKnown RBP6.36□□□□□ -1.39
CDH3-206ENST00000567674 LCE2DQ5TA82 110 aaPredicted RBP6.36□□□□□ -1.39
CDH3-206ENST00000567674 A0A1B0GWB2 263 aa6.35□□□□□ -1.39
CDH3-206ENST00000567674 NPC2P61916 151 aa6.35□□□□□ -1.39
CDH3-206ENST00000567674 MOBPQ13875 183 aa6.35□□□□□ -1.39
CDH3-206ENST00000567674 RETNLBQ9BQ08 111 aa6.35□□□□□ -1.39
CDH3-206ENST00000567674 IGLV9-49A0A0B4J1Y8 123 aa6.34□□□□□ -1.39
CDH3-206ENST00000567674 TRAV13-2A0A0B4J235 113 aa6.34□□□□□ -1.39
CDH3-206ENST00000567674 Q8N377 158 aa6.34□□□□□ -1.39
CDH3-206ENST00000567674 LAMTOR3Q9UHA4 124 aa6.34□□□□□ -1.39
CDH3-206ENST00000567674 COX7BP24311 80 aa6.33□□□□□ -1.4
CDH3-206ENST00000567674 CD164Q04900 197 aa6.33□□□□□ -1.4
CDH3-206ENST00000567674 NHP2Q9NX24 153 aaKnown RBP6.33□□□□□ -1.4
CDH3-206ENST00000567674 MUC17Q685J3 4493 aa6.33□□□□□ -1.4
CDH3-206ENST00000567674 TEX49A0A1B0GTD5 131 aa6.32□□□□□ -1.4
CDH3-206ENST00000567674 KRTAP13-3Q3SY46 172 aa6.32□□□□□ -1.4
CDH3-206ENST00000567674 C6orf99Q4VX62 202 aa6.32□□□□□ -1.4
CDH3-206ENST00000567674 LIMD2Q9BT23 127 aa6.32□□□□□ -1.4
CDH3-206ENST00000567674 HSBP1L1C9JCN9 74 aa6.31□□□□□ -1.4
CDH3-206ENST00000567674 S100A2P29034 98 aa6.31□□□□□ -1.4
CDH3-206ENST00000567674 ANKRD39Q53RE8 183 aa6.31□□□□□ -1.4
CDH3-206ENST00000567674 C9orf153Q5TBE3 101 aa6.3□□□□□ -1.4
CDH3-206ENST00000567674 Q5XG85 94 aa6.3□□□□□ -1.4
CDH3-206ENST00000567674 HIST3H2BBQ8N257 126 aa6.3□□□□□ -1.4
CDH3-206ENST00000567674 TTTY13Q9BZ97 58 aa6.3□□□□□ -1.4
CDH3-206ENST00000567674 IGLV5-48A0A075B6I7 105 aa6.29□□□□□ -1.4
CDH3-206ENST00000567674 S100A6P06703 90 aa6.29□□□□□ -1.4
CDH3-206ENST00000567674 VAMP3Q15836 100 aa6.29□□□□□ -1.4
CDH3-206ENST00000567674 TAL2Q16559 108 aa6.29□□□□□ -1.4
CDH3-206ENST00000567674 ASB16-AS1Q495Z4 193 aa6.29□□□□□ -1.4
CDH3-206ENST00000567674 MUSTN1Q8IVN3 82 aa6.29□□□□□ -1.4
CDH3-206ENST00000567674 HIST1H2BLQ99880 126 aa6.29□□□□□ -1.4
CDH3-206ENST00000567674 A6NDN8 102 aa6.28□□□□□ -1.4
CDH3-206ENST00000567674 SEC61BP60468 96 aaKnown RBP6.28□□□□□ -1.4
CDH3-206ENST00000567674 PCP2Q8IVA1 136 aa6.28□□□□□ -1.4
CDH3-206ENST00000567674 ST20-AS1Q8NBB2 130 aa6.28□□□□□ -1.4
CDH3-206ENST00000567674 PRO1933Q9H354 126 aa6.28□□□□□ -1.4
CDH3-206ENST00000567674 ATOH7Q8N100 152 aa6.25□□□□□ -1.41
CDH3-206ENST00000567674 DLEU1O43261 78 aa6.24□□□□□ -1.41
CDH3-206ENST00000567674 XP32Q5T750 250 aa6.24□□□□□ -1.41
CDH3-206ENST00000567674 PPDPFLQ8WWR9 84 aa6.24□□□□□ -1.41
CDH3-206ENST00000567674 H7C2G1 150 aa6.23□□□□□ -1.41
CDH3-206ENST00000567674 LINC01547P58512 204 aaPredicted RBP6.23□□□□□ -1.41
CDH3-206ENST00000567674 SMIM11BQ8TCY0 68 aa6.23□□□□□ -1.41
CDH3-206ENST00000567674 SMIM29Q86T20 159 aa6.22□□□□□ -1.41
CDH3-206ENST00000567674 BVES-AS1Q5T3Y7 98 aa6.21□□□□□ -1.42
CDH3-206ENST00000567674 COX8AP10176 69 aa6.2□□□□□ -1.42
CDH3-206ENST00000567674 LINC00575Q6W349 94 aa6.2□□□□□ -1.42
CDH3-206ENST00000567674 DEFB105AQ8NG35 78 aa6.2□□□□□ -1.42
CDH3-206ENST00000567674 SNCGO76070 127 aa6.19□□□□□ -1.42
CDH3-206ENST00000567674 Q6JHZ5 121 aa6.19□□□□□ -1.42
CDH3-206ENST00000567674 IGLV8-61A0A075B6I0 122 aa6.18□□□□□ -1.42
CDH3-206ENST00000567674 hADV29S1A0JD25 119 aa6.18□□□□□ -1.42
CDH3-206ENST00000567674 SCGB1D1O95968 90 aa6.18□□□□□ -1.42
CDH3-206ENST00000567674 TCL1BO95988 128 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms