RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 TRBV7-4A0A0J9YYF1 115 aa11.63□□□□□ -0.55
CMTM3-214ENST00000567572 TLX1NBP0CAT3 122 aa11.63□□□□□ -0.55
CMTM3-214ENST00000567572 A0A087WVE0 104 aa11.62□□□□□ -0.55
CMTM3-214ENST00000567572 Q6ZRP5 223 aa11.62□□□□□ -0.55
CMTM3-214ENST00000567572 PLA2G2DQ9UNK4 145 aa11.62□□□□□ -0.55
CMTM3-214ENST00000567572 BCE1O60756 84 aa11.61□□□□□ -0.55
CMTM3-214ENST00000567572 UPK3BQ9BT76 320 aa11.61□□□□□ -0.55
CMTM3-214ENST00000567572 KCNQ1DNQ9H478 68 aa11.59□□□□□ -0.55
CMTM3-214ENST00000567572 CXCL6P80162 114 aa11.58□□□□□ -0.55
CMTM3-214ENST00000567572 C5orf47Q569G3 176 aa11.58□□□□□ -0.55
CMTM3-214ENST00000567572 RMI2Q96E14 147 aa11.58□□□□□ -0.56
CMTM3-214ENST00000567572 Q6ZVQ6 151 aa11.57□□□□□ -0.56
CMTM3-214ENST00000567572 NKAPP1Q8N9T2 125 aa11.57□□□□□ -0.56
CMTM3-214ENST00000567572 IGLV5-37A0A075B6J1 123 aa11.55□□□□□ -0.56
CMTM3-214ENST00000567572 LINC01547P58512 204 aaPredicted RBP11.55□□□□□ -0.56
CMTM3-214ENST00000567572 DNHD1Q96M86 4753 aa11.55□□□□□ -0.56
CMTM3-214ENST00000567572 FAM19A1Q7Z5A9 133 aa11.54□□□□□ -0.56
CMTM3-214ENST00000567572 APLNQ9ULZ1 77 aa11.52□□□□□ -0.56
CMTM3-214ENST00000567572 DNAH1Q9P2D7 4330 aa11.52□□□□□ -0.56
CMTM3-214ENST00000567572 DYNC2H1Q8NCM8 4307 aaKnown RBP11.52□□□□□ -0.56
CMTM3-214ENST00000567572 M0R2N4 97 aa11.52□□□□□ -0.57
CMTM3-214ENST00000567572 C7orf33Q8WU49 177 aa11.51□□□□□ -0.57
CMTM3-214ENST00000567572 PRYO14603 147 aa11.5□□□□□ -0.57
CMTM3-214ENST00000567572 DHRS4-AS1Q9P1J3 65 aa11.5□□□□□ -0.57
CMTM3-214ENST00000567572 MEGF8Q7Z7M0 2845 aa11.5□□□□□ -0.57
CMTM3-214ENST00000567572 TMEM258P61165 79 aa11.49□□□□□ -0.57
CMTM3-214ENST00000567572 HAMPP81172 84 aa11.48□□□□□ -0.57
CMTM3-214ENST00000567572 SERTAD4-AS1Q5TG53 156 aa11.48□□□□□ -0.57
CMTM3-214ENST00000567572 PRKDCP78527 4128 aaKnown RBP11.47□□□□□ -0.57
CMTM3-214ENST00000567572 A0A1B0GW54 56 aa11.47□□□□□ -0.57
CMTM3-214ENST00000567572 CASC10Q5T4H9 136 aa11.47□□□□□ -0.57
CMTM3-214ENST00000567572 SPRR1AP35321 89 aa11.46□□□□□ -0.58
CMTM3-214ENST00000567572 Q6ZRX8 168 aa11.45□□□□□ -0.58
CMTM3-214ENST00000567572 CSMD3Q7Z407 3707 aa11.45□□□□□ -0.58
CMTM3-214ENST00000567572 IGLV1-50A0A075B6I6 118 aa11.45□□□□□ -0.58
CMTM3-214ENST00000567572 NUPR2A6NF83 97 aa11.45□□□□□ -0.58
CMTM3-214ENST00000567572 KRTAP1-5Q9BYS1 174 aa11.45□□□□□ -0.58
CMTM3-214ENST00000567572 IGLV5-48A0A075B6I7 105 aa11.44□□□□□ -0.58
CMTM3-214ENST00000567572 KRTAP4-16G5E9R7 235 aaPredicted RBP11.44□□□□□ -0.58
CMTM3-214ENST00000567572 LYSTQ99698 3801 aa11.44□□□□□ -0.58
CMTM3-214ENST00000567572 TRAV7A0A075B6U4 112 aa11.43□□□□□ -0.58
CMTM3-214ENST00000567572 UBE2DNLQ8IWF7 75 aa11.43□□□□□ -0.58
CMTM3-214ENST00000567572 LOC107984640A0A0U1RRK4 108 aa11.42□□□□□ -0.58
CMTM3-214ENST00000567572 RPS28P62857 69 aaKnown RBP11.42□□□□□ -0.58
CMTM3-214ENST00000567572 KRTAP21-3Q3LHN1 58 aa11.41□□□□□ -0.58
CMTM3-214ENST00000567572 ETDCA0A1B0GVM5 59 aa11.41□□□□□ -0.58
CMTM3-214ENST00000567572 J3KT08 172 aa11.41□□□□□ -0.58
CMTM3-214ENST00000567572 Q8N377 158 aa11.4□□□□□ -0.58
CMTM3-214ENST00000567572 DNAH7Q8WXX0 4024 aa11.39□□□□□ -0.59
CMTM3-214ENST00000567572 CYSTM1Q9H1C7 97 aa11.38□□□□□ -0.59
CMTM3-214ENST00000567572 MRPL55Q7Z7F7 128 aaKnown RBP11.37□□□□□ -0.59
CMTM3-214ENST00000567572 PLECQ15149 4684 aaKnown RBP11.36□□□□□ -0.59
CMTM3-214ENST00000567572 NREPQ16612 68 aa11.35□□□□□ -0.59
CMTM3-214ENST00000567572 Q9BRP9 147 aa11.35□□□□□ -0.59
CMTM3-214ENST00000567572 FUSP35637 526 aaKnown RBP eCLIP11.35□□□□□ -0.59
CMTM3-214ENST00000567572 TNP2Q05952 138 aa11.35□□□□□ -0.59
CMTM3-214ENST00000567572 TENM2Q9NT68 2774 aa11.34□□□□□ -0.59
CMTM3-214ENST00000567572 FAM168BA1KXE4 195 aa11.34□□□□□ -0.59
CMTM3-214ENST00000567572 KRTAP7-1Q8IUC3 87 aa11.34□□□□□ -0.59
CMTM3-214ENST00000567572 RPL37AP8A6NKH3 93 aa11.33□□□□□ -0.6
CMTM3-214ENST00000567572 STARD9Q9P2P6 4700 aa11.32□□□□□ -0.6
CMTM3-214ENST00000567572 KLKP1Q107X0 134 aa11.32□□□□□ -0.6
CMTM3-214ENST00000567572 C20orf197Q8N268 126 aa11.32□□□□□ -0.6
CMTM3-214ENST00000567572 DEFB105AQ8NG35 78 aa11.32□□□□□ -0.6
CMTM3-214ENST00000567572 CNBPP62633 177 aaKnown RBP11.31□□□□□ -0.6
CMTM3-214ENST00000567572 REG3GQ6UW15 175 aa11.3□□□□□ -0.6
CMTM3-214ENST00000567572 FAM19A5Q7Z5A7 132 aaPredicted RBP11.3□□□□□ -0.6
CMTM3-214ENST00000567572 NBDYA0A0U1RRE5 68 aa11.29□□□□□ -0.6
CMTM3-214ENST00000567572 DPH3Q96FX2 82 aa11.29□□□□□ -0.6
CMTM3-214ENST00000567572 DNAH10Q8IVF4 4471 aa11.29□□□□□ -0.6
CMTM3-214ENST00000567572 BPY2O14599 106 aa11.29□□□□□ -0.6
CMTM3-214ENST00000567572 SCXQ7RTU7 201 aa11.29□□□□□ -0.6
CMTM3-214ENST00000567572 C16orf90A8MZG2 172 aa11.28□□□□□ -0.6
CMTM3-214ENST00000567572 PSCAO43653 123 aa11.28□□□□□ -0.6
CMTM3-214ENST00000567572 ERC2-IT1O76042 136 aa11.28□□□□□ -0.6
CMTM3-214ENST00000567572 IGKV4-1P06312 121 aa11.28□□□□□ -0.6
CMTM3-214ENST00000567572 Q8NBF4 154 aa11.28□□□□□ -0.6
CMTM3-214ENST00000567572 C1orf137Q5JT78 98 aa11.27□□□□□ -0.6
CMTM3-214ENST00000567572 C14orf177Q52M58 125 aa11.27□□□□□ -0.61
CMTM3-214ENST00000567572 SPRR4Q96PI1 79 aa11.27□□□□□ -0.61
CMTM3-214ENST00000567572 NDUFC1O43677 76 aa11.25□□□□□ -0.61
CMTM3-214ENST00000567572 FBN3Q75N90 2809 aa11.25□□□□□ -0.61
CMTM3-214ENST00000567572 VPS13DQ5THJ4 4388 aa11.25□□□□□ -0.61
CMTM3-214ENST00000567572 A0A1W2PNM2 257 aa11.25□□□□□ -0.61
CMTM3-214ENST00000567572 C3orf84H3BNL1 204 aa11.25□□□□□ -0.61
CMTM3-214ENST00000567572 UBE2BP63146 152 aa11.25□□□□□ -0.61
CMTM3-214ENST00000567572 PKIGQ9Y2B9 76 aa11.25□□□□□ -0.61
CMTM3-214ENST00000567572 ST20-AS1Q8NBB2 130 aa11.23□□□□□ -0.61
CMTM3-214ENST00000567572 H7BZZ5 65 aa11.23□□□□□ -0.61
CMTM3-214ENST00000567572 Q6ZRN7 208 aaPredicted RBP11.22□□□□□ -0.61
CMTM3-214ENST00000567572 FAM236DA0A1B0GTK5 79 aa11.21□□□□□ -0.61
CMTM3-214ENST00000567572 FAM236CP0DP71 79 aa11.21□□□□□ -0.61
CMTM3-214ENST00000567572 A0A096LNI7 61 aa11.2□□□□□ -0.62
CMTM3-214ENST00000567572 LRCOL1A6NCL2 159 aa11.2□□□□□ -0.62
CMTM3-214ENST00000567572 F8WEM9 126 aa11.2□□□□□ -0.62
CMTM3-214ENST00000567572 SMIM29Q86T20 159 aa11.17□□□□□ -0.62
CMTM3-214ENST00000567572 IGLV8-61A0A075B6I0 122 aa11.17□□□□□ -0.62
CMTM3-214ENST00000567572 Q8N9L7 120 aa11.17□□□□□ -0.62
CMTM3-214ENST00000567572 OCR1Q9BZK8 76 aa11.17□□□□□ -0.62
CMTM3-214ENST00000567572 ATP5EP56381 51 aaPredicted RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms