RNA–Protein interactions for RNA: ENST00000567023.5

COMMD4-216, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 926 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-216ENST00000567023 EIF4EBP3O60516 100 aaPredicted RBP8.18□□□□□ -1.1
COMMD4-216ENST00000567023 NDUFC2O95298 119 aa8.18□□□□□ -1.1
COMMD4-216ENST00000567023 MUC17Q685J3 4493 aa8.18□□□□□ -1.1
COMMD4-216ENST00000567023 A0A0U1RQV1 116 aa8.17□□□□□ -1.1
COMMD4-216ENST00000567023 MIEN1Q9BRT3 115 aa8.17□□□□□ -1.1
COMMD4-216ENST00000567023 SPANXB1Q9NS25 103 aaPredicted RBP8.17□□□□□ -1.1
COMMD4-216ENST00000567023 IGLV7-46A0A075B6I9 117 aa8.16□□□□□ -1.1
COMMD4-216ENST00000567023 TRBV10-3A0A0K0K1G6 114 aa8.16□□□□□ -1.1
COMMD4-216ENST00000567023 SMCR5Q8TEV8 140 aa8.16□□□□□ -1.1
COMMD4-216ENST00000567023 ETDCA0A1B0GVM5 59 aa8.15□□□□□ -1.1
COMMD4-216ENST00000567023 LINC00308Q8TCZ7 52 aa8.15□□□□□ -1.1
COMMD4-216ENST00000567023 S100A12P80511 92 aa8.14□□□□□ -1.11
COMMD4-216ENST00000567023 LINC00483Q53H64 154 aa8.14□□□□□ -1.11
COMMD4-216ENST00000567023 CDIP1Q9H305 208 aa8.14□□□□□ -1.11
COMMD4-216ENST00000567023 FAT4Q6V0I7 4981 aa8.14□□□□□ -1.11
COMMD4-216ENST00000567023 B5MCH6 92 aa8.13□□□□□ -1.11
COMMD4-216ENST00000567023 IGLV6-57P01721 117 aa8.13□□□□□ -1.11
COMMD4-216ENST00000567023 DDTP30046 118 aa8.13□□□□□ -1.11
COMMD4-216ENST00000567023 NPC2P61916 151 aa8.13□□□□□ -1.11
COMMD4-216ENST00000567023 PCP2Q8IVA1 136 aa8.13□□□□□ -1.11
COMMD4-216ENST00000567023 PPDPFQ9H3Y8 114 aa8.13□□□□□ -1.11
COMMD4-216ENST00000567023 C4orf48Q5BLP8 95 aa8.12□□□□□ -1.11
COMMD4-216ENST00000567023 SCGB1D4Q6XE38 83 aa8.12□□□□□ -1.11
COMMD4-216ENST00000567023 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
COMMD4-216ENST00000567023 SPANXDQ9BXN6 97 aa8.12□□□□□ -1.11
COMMD4-216ENST00000567023 SPANXCQ9NY87 97 aa8.12□□□□□ -1.11
COMMD4-216ENST00000567023 Q8NBF4 154 aa8.11□□□□□ -1.11
COMMD4-216ENST00000567023 SPINK1P00995 79 aa8.1□□□□□ -1.11
COMMD4-216ENST00000567023 Q6ZVH6 145 aa8.09□□□□□ -1.11
COMMD4-216ENST00000567023 Q9BRP9 147 aa8.09□□□□□ -1.11
COMMD4-216ENST00000567023 HSBP1L1C9JCN9 74 aa8.08□□□□□ -1.12
COMMD4-216ENST00000567023 ERC2-IT1O76042 136 aa8.08□□□□□ -1.12
COMMD4-216ENST00000567023 SCGB1D1O95968 90 aa8.08□□□□□ -1.12
COMMD4-216ENST00000567023 S100A7L2Q5SY68 101 aa8.08□□□□□ -1.12
COMMD4-216ENST00000567023 Q6ZRX8 168 aa8.08□□□□□ -1.12
COMMD4-216ENST00000567023 IFITM1P13164 125 aa8.07□□□□□ -1.12
COMMD4-216ENST00000567023 LCE2AQ5TA79 106 aaPredicted RBP8.07□□□□□ -1.12
COMMD4-216ENST00000567023 GAGE2AQ6NT46 116 aa8.07□□□□□ -1.12
COMMD4-216ENST00000567023 SSBP3-AS1Q7Z2R9 100 aa8.07□□□□□ -1.12
COMMD4-216ENST00000567023 TRAV23DV6A0A075B6W5 121 aa8.06□□□□□ -1.12
COMMD4-216ENST00000567023 RPS29P62273 56 aaKnown RBP8.06□□□□□ -1.12
COMMD4-216ENST00000567023 COPS9Q8WXC6 57 aa8.06□□□□□ -1.12
COMMD4-216ENST00000567023 LINC00518Q8N0U6 118 aa8.05□□□□□ -1.12
COMMD4-216ENST00000567023 ZNF73O43830 326 aaPredicted RBP8.04□□□□□ -1.12
COMMD4-216ENST00000567023 JOSD1Q15040 202 aaPredicted RBP8.04□□□□□ -1.12
COMMD4-216ENST00000567023 KRTAP13-3Q3SY46 172 aa8.04□□□□□ -1.12
COMMD4-216ENST00000567023 CBY1Q9Y3M2 126 aa8.04□□□□□ -1.12
COMMD4-216ENST00000567023 MOBPQ13875 183 aa8.03□□□□□ -1.12
COMMD4-216ENST00000567023 MUSTN1Q8IVN3 82 aa8.03□□□□□ -1.12
COMMD4-216ENST00000567023 IGLV9-49A0A0B4J1Y8 123 aa8.02□□□□□ -1.13
COMMD4-216ENST00000567023 Q8N377 158 aa8.01□□□□□ -1.13
COMMD4-216ENST00000567023 OR13C6PQ8NH95 151 aa8.01□□□□□ -1.13
COMMD4-216ENST00000567023 COX8AP10176 69 aa8□□□□□ -1.13
COMMD4-216ENST00000567023 DLEU1O43261 78 aa7.99□□□□□ -1.13
COMMD4-216ENST00000567023 SLC25A20O43772 301 aa7.98□□□□□ -1.13
COMMD4-216ENST00000567023 HINT1P49773 126 aaPredicted RBP7.98□□□□□ -1.13
COMMD4-216ENST00000567023 ASB16-AS1Q495Z4 193 aa7.98□□□□□ -1.13
COMMD4-216ENST00000567023 SPATA45Q537H7 98 aa7.96□□□□□ -1.14
COMMD4-216ENST00000567023 PAM16Q9Y3D7 125 aa7.96□□□□□ -1.14
COMMD4-216ENST00000567023 TRAV13-2A0A0B4J235 113 aa7.95□□□□□ -1.14
COMMD4-216ENST00000567023 TRBV7-6A0A0J9YX20 115 aa7.95□□□□□ -1.14
COMMD4-216ENST00000567023 A6NDN8 102 aa7.95□□□□□ -1.14
COMMD4-216ENST00000567023 SPRR1BP22528 89 aa7.95□□□□□ -1.14
COMMD4-216ENST00000567023 ELOF1P60002 83 aaKnown RBP7.95□□□□□ -1.14
COMMD4-216ENST00000567023 C6orf99Q4VX62 202 aa7.95□□□□□ -1.14
COMMD4-216ENST00000567023 ST20-AS1Q8NBB2 130 aa7.95□□□□□ -1.14
COMMD4-216ENST00000567023 VAMP8Q9BV40 100 aa7.95□□□□□ -1.14
COMMD4-216ENST00000567023 TMA7Q9Y2S6 64 aaKnown RBP7.95□□□□□ -1.14
COMMD4-216ENST00000567023 C9orf153Q5TBE3 101 aa7.94□□□□□ -1.14
COMMD4-216ENST00000567023 C14orf144Q96I85 54 aa7.94□□□□□ -1.14
COMMD4-216ENST00000567023 KRTAP9-2Q9BYQ4 174 aa7.94□□□□□ -1.14
COMMD4-216ENST00000567023 A4D1N5 150 aa7.93□□□□□ -1.14
COMMD4-216ENST00000567023 COX7BP24311 80 aa7.93□□□□□ -1.14
COMMD4-216ENST00000567023 PYY3Q5JQD4 70 aa7.93□□□□□ -1.14
COMMD4-216ENST00000567023 DHRS4-AS1Q9P1J3 65 aa7.93□□□□□ -1.14
COMMD4-216ENST00000567023 SEC61BP60468 96 aaKnown RBP7.92□□□□□ -1.14
COMMD4-216ENST00000567023 HIGD1BQ9P298 99 aa7.92□□□□□ -1.14
COMMD4-216ENST00000567023 SLC25A34Q6PIV7 304 aa7.91□□□□□ -1.14
COMMD4-216ENST00000567023 HIST1H4GQ99525 98 aa7.91□□□□□ -1.14
COMMD4-216ENST00000567023 A0A1B0GWB2 263 aa7.9□□□□□ -1.14
COMMD4-216ENST00000567023 C2orf91Q6ZV80 131 aa7.9□□□□□ -1.14
COMMD4-216ENST00000567023 SMIM11BQ8TCY0 68 aa7.9□□□□□ -1.14
COMMD4-216ENST00000567023 XP32Q5T750 250 aa7.89□□□□□ -1.15
COMMD4-216ENST00000567023 KRTAP4-1Q9BYQ7 146 aa7.88□□□□□ -1.15
COMMD4-216ENST00000567023 LAMTOR3Q9UHA4 124 aa7.87□□□□□ -1.15
COMMD4-216ENST00000567023 LIMD2Q9BT23 127 aa7.85□□□□□ -1.15
COMMD4-216ENST00000567023 TAL2Q16559 108 aa7.84□□□□□ -1.15
COMMD4-216ENST00000567023 C12orf57Q99622 126 aa7.84□□□□□ -1.15
COMMD4-216ENST00000567023 TEX49A0A1B0GTD5 131 aa7.83□□□□□ -1.16
COMMD4-216ENST00000567023 CFC1BP0CG36 223 aa7.83□□□□□ -1.16
COMMD4-216ENST00000567023 CFC1P0CG37 223 aa7.83□□□□□ -1.16
COMMD4-216ENST00000567023 CD164Q04900 197 aa7.83□□□□□ -1.16
COMMD4-216ENST00000567023 IGLV5-48A0A075B6I7 105 aa7.82□□□□□ -1.16
COMMD4-216ENST00000567023 LINC01547P58512 204 aaPredicted RBP7.82□□□□□ -1.16
COMMD4-216ENST00000567023 VAMP3Q15836 100 aa7.82□□□□□ -1.16
COMMD4-216ENST00000567023 NHP2Q9NX24 153 aaKnown RBP7.82□□□□□ -1.16
COMMD4-216ENST00000567023 A0A0B4J2C4 111 aa7.81□□□□□ -1.16
COMMD4-216ENST00000567023 HRCT1Q6UXD1 115 aa7.81□□□□□ -1.16
COMMD4-216ENST00000567023 LINC00575Q6W349 94 aa7.81□□□□□ -1.16
COMMD4-216ENST00000567023 CEND1Q8N111 149 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms