RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 ESRGQ1W209 222 aa11.05□□□□□ -0.64
CMTM3-213ENST00000566756 LINC00528Q8N1L1 170 aa11.05□□□□□ -0.64
CMTM3-213ENST00000566756 J3KT08 172 aa11.03□□□□□ -0.64
CMTM3-213ENST00000566756 M0R2N4 97 aa11.03□□□□□ -0.64
CMTM3-213ENST00000566756 HUWE1Q7Z6Z7 4374 aaKnown RBP11.03□□□□□ -0.64
CMTM3-213ENST00000566756 B9D2Q9BPU9 175 aa11.02□□□□□ -0.65
CMTM3-213ENST00000566756 CYSTM1Q9H1C7 97 aa11.01□□□□□ -0.65
CMTM3-213ENST00000566756 SYCNQ0VAF6 134 aa10.99□□□□□ -0.65
CMTM3-213ENST00000566756 Q6ZRP5 223 aa10.99□□□□□ -0.65
CMTM3-213ENST00000566756 HAMPP81172 84 aa10.99□□□□□ -0.65
CMTM3-213ENST00000566756 TRAV7A0A075B6U4 112 aa10.98□□□□□ -0.65
CMTM3-213ENST00000566756 DNAH10OSP0CZ25 163 aa10.98□□□□□ -0.65
CMTM3-213ENST00000566756 IGKV2D-24A0A075B6R9 120 aa10.97□□□□□ -0.65
CMTM3-213ENST00000566756 TLX1NBP0CAT3 122 aa10.97□□□□□ -0.65
CMTM3-213ENST00000566756 KCNQ1DNQ9H478 68 aa10.97□□□□□ -0.65
CMTM3-213ENST00000566756 PLA2G2DQ9UNK4 145 aa10.97□□□□□ -0.65
CMTM3-213ENST00000566756 LOC107984640A0A0U1RRK4 108 aa10.96□□□□□ -0.65
CMTM3-213ENST00000566756 KRTAP21-3Q3LHN1 58 aa10.96□□□□□ -0.66
CMTM3-213ENST00000566756 NKAPP1Q8N9T2 125 aa10.95□□□□□ -0.66
CMTM3-213ENST00000566756 DNAH9Q9NYC9 4486 aa10.93□□□□□ -0.66
CMTM3-213ENST00000566756 DPH3Q96FX2 82 aa10.93□□□□□ -0.66
CMTM3-213ENST00000566756 IGLV5-37A0A075B6J1 123 aa10.92□□□□□ -0.66
CMTM3-213ENST00000566756 A0A1B0GW54 56 aa10.91□□□□□ -0.66
CMTM3-213ENST00000566756 RMI2Q96E14 147 aa10.91□□□□□ -0.66
CMTM3-213ENST00000566756 C7orf33Q8WU49 177 aa10.9□□□□□ -0.66
CMTM3-213ENST00000566756 DHRS4-AS1Q9P1J3 65 aa10.9□□□□□ -0.66
CMTM3-213ENST00000566756 STAB2Q8WWQ8 2551 aa10.9□□□□□ -0.67
CMTM3-213ENST00000566756 COL7A1Q02388 2944 aa10.89□□□□□ -0.67
CMTM3-213ENST00000566756 C20orf197Q8N268 126 aa10.88□□□□□ -0.67
CMTM3-213ENST00000566756 LINC00588Q9Y4M8 146 aa10.88□□□□□ -0.67
CMTM3-213ENST00000566756 PRYO14603 147 aa10.88□□□□□ -0.67
CMTM3-213ENST00000566756 KLKP1Q107X0 134 aa10.88□□□□□ -0.67
CMTM3-213ENST00000566756 SERTAD4-AS1Q5TG53 156 aa10.88□□□□□ -0.67
CMTM3-213ENST00000566756 IGLV5-48A0A075B6I7 105 aa10.87□□□□□ -0.67
CMTM3-213ENST00000566756 SPRR1AP35321 89 aa10.85□□□□□ -0.67
CMTM3-213ENST00000566756 FAM19A5Q7Z5A7 132 aaPredicted RBP10.85□□□□□ -0.67
CMTM3-213ENST00000566756 Q8N377 158 aa10.85□□□□□ -0.67
CMTM3-213ENST00000566756 KRTAP4-16G5E9R7 235 aaPredicted RBP10.85□□□□□ -0.67
CMTM3-213ENST00000566756 Q6ZRX8 168 aa10.85□□□□□ -0.67
CMTM3-213ENST00000566756 IGLV1-50A0A075B6I6 118 aa10.83□□□□□ -0.68
CMTM3-213ENST00000566756 NREPQ16612 68 aa10.83□□□□□ -0.68
CMTM3-213ENST00000566756 H7BZZ5 65 aa10.82□□□□□ -0.68
CMTM3-213ENST00000566756 ERC2-IT1O76042 136 aa10.81□□□□□ -0.68
CMTM3-213ENST00000566756 FAM236DA0A1B0GTK5 79 aa10.8□□□□□ -0.68
CMTM3-213ENST00000566756 NDUFC1O43677 76 aa10.8□□□□□ -0.68
CMTM3-213ENST00000566756 FAM236CP0DP71 79 aa10.8□□□□□ -0.68
CMTM3-213ENST00000566756 SCXQ7RTU7 201 aa10.8□□□□□ -0.68
CMTM3-213ENST00000566756 APLNQ9ULZ1 77 aa10.8□□□□□ -0.68
CMTM3-213ENST00000566756 ETDCA0A1B0GVM5 59 aa10.79□□□□□ -0.68
CMTM3-213ENST00000566756 DNHD1Q96M86 4753 aa10.79□□□□□ -0.68
CMTM3-213ENST00000566756 IGKV4-1P06312 121 aa10.79□□□□□ -0.68
CMTM3-213ENST00000566756 FUSP35637 526 aaKnown RBP eCLIP10.79□□□□□ -0.68
CMTM3-213ENST00000566756 TNP2Q05952 138 aa10.78□□□□□ -0.68
CMTM3-213ENST00000566756 Q9BRP9 147 aa10.77□□□□□ -0.68
CMTM3-213ENST00000566756 BPY2O14599 106 aa10.77□□□□□ -0.69
CMTM3-213ENST00000566756 NUPR2A6NF83 97 aa10.76□□□□□ -0.69
CMTM3-213ENST00000566756 DEFB105AQ8NG35 78 aa10.76□□□□□ -0.69
CMTM3-213ENST00000566756 OXTP01178 125 aa10.76□□□□□ -0.69
CMTM3-213ENST00000566756 DYNC2H1Q8NCM8 4307 aaKnown RBP10.75□□□□□ -0.69
CMTM3-213ENST00000566756 EPM2AB3EWF7 344 aa10.75□□□□□ -0.69
CMTM3-213ENST00000566756 MRPL55Q7Z7F7 128 aaKnown RBP10.74□□□□□ -0.69
CMTM3-213ENST00000566756 KRTAP7-1Q8IUC3 87 aa10.74□□□□□ -0.69
CMTM3-213ENST00000566756 PRKDCP78527 4128 aaKnown RBP10.74□□□□□ -0.69
CMTM3-213ENST00000566756 RPL37AP8A6NKH3 93 aa10.74□□□□□ -0.69
CMTM3-213ENST00000566756 SERP1Q9Y6X1 66 aa10.74□□□□□ -0.69
CMTM3-213ENST00000566756 FAM168BA1KXE4 195 aa10.73□□□□□ -0.69
CMTM3-213ENST00000566756 CASC10Q5T4H9 136 aa10.73□□□□□ -0.69
CMTM3-213ENST00000566756 C3orf84H3BNL1 204 aa10.72□□□□□ -0.69
CMTM3-213ENST00000566756 ATP5EP56381 51 aaPredicted RBP10.72□□□□□ -0.69
CMTM3-213ENST00000566756 Q8NBF4 154 aa10.72□□□□□ -0.69
CMTM3-213ENST00000566756 SPRR4Q96PI1 79 aa10.72□□□□□ -0.69
CMTM3-213ENST00000566756 MEGF8Q7Z7M0 2845 aa10.71□□□□□ -0.69
CMTM3-213ENST00000566756 A0A1W2PNM2 257 aa10.71□□□□□ -0.69
CMTM3-213ENST00000566756 C1orf137Q5JT78 98 aa10.71□□□□□ -0.69
CMTM3-213ENST00000566756 OCR1Q9BZK8 76 aa10.7□□□□□ -0.7
CMTM3-213ENST00000566756 SNURFQ9Y675 71 aa10.7□□□□□ -0.7
CMTM3-213ENST00000566756 UBE2DNLQ8IWF7 75 aa10.69□□□□□ -0.7
CMTM3-213ENST00000566756 Q8N9L7 120 aa10.68□□□□□ -0.7
CMTM3-213ENST00000566756 TMEM254Q8TBM7 123 aa10.68□□□□□ -0.7
CMTM3-213ENST00000566756 F8WEM9 126 aa10.68□□□□□ -0.7
CMTM3-213ENST00000566756 REG3GQ6UW15 175 aa10.68□□□□□ -0.7
CMTM3-213ENST00000566756 C5orf47Q569G3 176 aa10.67□□□□□ -0.7
CMTM3-213ENST00000566756 DNAH1Q9P2D7 4330 aa10.67□□□□□ -0.7
CMTM3-213ENST00000566756 ST20-AS1Q8NBB2 130 aa10.66□□□□□ -0.7
CMTM3-213ENST00000566756 UBE2BP63146 152 aa10.65□□□□□ -0.7
CMTM3-213ENST00000566756 CSMD3Q7Z407 3707 aa10.65□□□□□ -0.71
CMTM3-213ENST00000566756 Q5XG85 94 aa10.65□□□□□ -0.71
CMTM3-213ENST00000566756 DNAH7Q8WXX0 4024 aa10.64□□□□□ -0.71
CMTM3-213ENST00000566756 CNBPP62633 177 aaKnown RBP10.63□□□□□ -0.71
CMTM3-213ENST00000566756 KRTAP1-5Q9BYS1 174 aa10.63□□□□□ -0.71
CMTM3-213ENST00000566756 A0A0U1RQV1 116 aa10.63□□□□□ -0.71
CMTM3-213ENST00000566756 C16orf90A8MZG2 172 aa10.62□□□□□ -0.71
CMTM3-213ENST00000566756 SMIM29Q86T20 159 aa10.62□□□□□ -0.71
CMTM3-213ENST00000566756 C14orf177Q52M58 125 aa10.61□□□□□ -0.71
CMTM3-213ENST00000566756 PKIGQ9Y2B9 76 aa10.6□□□□□ -0.71
CMTM3-213ENST00000566756 IGLV8-61A0A075B6I0 122 aa10.59□□□□□ -0.71
CMTM3-213ENST00000566756 LCE6AA0A183 80 aa10.59□□□□□ -0.71
CMTM3-213ENST00000566756 DSCR10P59022 87 aa10.57□□□□□ -0.72
CMTM3-213ENST00000566756 LINC00476Q8WZB0 136 aa10.57□□□□□ -0.72
CMTM3-213ENST00000566756 PLECQ15149 4684 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms