RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 IGLV6-57P01721 117 aa8.04□□□□□ -1.12
VPS9D1-204ENST00000565023 DDTP30046 118 aa8.04□□□□□ -1.12
VPS9D1-204ENST00000565023 SPRR1AP35321 89 aa8.04□□□□□ -1.12
VPS9D1-204ENST00000565023 JOSD1Q15040 202 aaPredicted RBP8.04□□□□□ -1.12
VPS9D1-204ENST00000565023 Q6ZVH6 145 aa8.04□□□□□ -1.12
VPS9D1-204ENST00000565023 HIGD2AQ9BW72 106 aa8.04□□□□□ -1.12
VPS9D1-204ENST00000565023 PPDPFQ9H3Y8 114 aa8.04□□□□□ -1.12
VPS9D1-204ENST00000565023 KRTAP4-16G5E9R7 235 aaPredicted RBP8.03□□□□□ -1.12
VPS9D1-204ENST00000565023 IFITM1P13164 125 aa8.03□□□□□ -1.12
VPS9D1-204ENST00000565023 LINC00337Q8N6G1 96 aa8.03□□□□□ -1.12
VPS9D1-204ENST00000565023 TMA7Q9Y2S6 64 aaKnown RBP8.03□□□□□ -1.12
VPS9D1-204ENST00000565023 S100A12P80511 92 aa8.02□□□□□ -1.13
VPS9D1-204ENST00000565023 KRTAP13-2Q52LG2 175 aa8.02□□□□□ -1.13
VPS9D1-204ENST00000565023 S100A7L2Q5SY68 101 aa8.02□□□□□ -1.13
VPS9D1-204ENST00000565023 COPS9Q8WXC6 57 aa8.01□□□□□ -1.13
VPS9D1-204ENST00000565023 LPAP08519 4548 aa8.01□□□□□ -1.13
VPS9D1-204ENST00000565023 LINC00518Q8N0U6 118 aa8□□□□□ -1.13
VPS9D1-204ENST00000565023 COX8AP10176 69 aa7.99□□□□□ -1.13
VPS9D1-204ENST00000565023 MUSTN1Q8IVN3 82 aa7.99□□□□□ -1.13
VPS9D1-204ENST00000565023 TRAV23DV6A0A075B6W5 121 aa7.98□□□□□ -1.13
VPS9D1-204ENST00000565023 ETDCA0A1B0GVM5 59 aa7.98□□□□□ -1.13
VPS9D1-204ENST00000565023 DLEU1O43261 78 aa7.98□□□□□ -1.13
VPS9D1-204ENST00000565023 FAM229BQ4G0N7 80 aa7.98□□□□□ -1.13
VPS9D1-204ENST00000565023 B5MCH6 92 aa7.97□□□□□ -1.13
VPS9D1-204ENST00000565023 SPATA45Q537H7 98 aa7.97□□□□□ -1.13
VPS9D1-204ENST00000565023 C3orf22Q8N5N4 141 aa7.97□□□□□ -1.13
VPS9D1-204ENST00000565023 LINC00304Q8N9R0 145 aa7.97□□□□□ -1.13
VPS9D1-204ENST00000565023 OR13C6PQ8NH95 151 aa7.97□□□□□ -1.13
VPS9D1-204ENST00000565023 VAMP8Q9BV40 100 aa7.97□□□□□ -1.13
VPS9D1-204ENST00000565023 PAM16Q9Y3D7 125 aa7.97□□□□□ -1.13
VPS9D1-204ENST00000565023 CBY1Q9Y3M2 126 aa7.97□□□□□ -1.13
VPS9D1-204ENST00000565023 PYY3Q5JQD4 70 aa7.96□□□□□ -1.14
VPS9D1-204ENST00000565023 ZNF73O43830 326 aaPredicted RBP7.95□□□□□ -1.14
VPS9D1-204ENST00000565023 C14orf144Q96I85 54 aa7.95□□□□□ -1.14
VPS9D1-204ENST00000565023 RETNLBQ9BQ08 111 aa7.95□□□□□ -1.14
VPS9D1-204ENST00000565023 Q6ZRX8 168 aa7.94□□□□□ -1.14
VPS9D1-204ENST00000565023 SMCR5Q8TEV8 140 aa7.94□□□□□ -1.14
VPS9D1-204ENST00000565023 SPRR4Q96PI1 79 aa7.94□□□□□ -1.14
VPS9D1-204ENST00000565023 Q9BRP9 147 aa7.92□□□□□ -1.14
VPS9D1-204ENST00000565023 ZNF706Q9Y5V0 76 aaPredicted RBP7.92□□□□□ -1.14
VPS9D1-204ENST00000565023 SLC25A34Q6PIV7 304 aa7.91□□□□□ -1.14
VPS9D1-204ENST00000565023 HIGD1BQ9P298 99 aa7.91□□□□□ -1.14
VPS9D1-204ENST00000565023 MUC2Q02817 5179 aa7.91□□□□□ -1.14
VPS9D1-204ENST00000565023 TRAV13-2A0A0B4J235 113 aa7.9□□□□□ -1.14
VPS9D1-204ENST00000565023 A4D1N5 150 aa7.9□□□□□ -1.14
VPS9D1-204ENST00000565023 A6NDN8 102 aa7.9□□□□□ -1.14
VPS9D1-204ENST00000565023 ERC2-IT1O76042 136 aa7.9□□□□□ -1.14
VPS9D1-204ENST00000565023 HINT1P49773 126 aaPredicted RBP7.9□□□□□ -1.14
VPS9D1-204ENST00000565023 HIST1H4GQ99525 98 aa7.9□□□□□ -1.14
VPS9D1-204ENST00000565023 C6orf99Q4VX62 202 aa7.89□□□□□ -1.15
VPS9D1-204ENST00000565023 GAGE2AQ6NT46 116 aa7.89□□□□□ -1.15
VPS9D1-204ENST00000565023 C2orf91Q6ZV80 131 aa7.89□□□□□ -1.15
VPS9D1-204ENST00000565023 TRBV7-6A0A0J9YX20 115 aa7.87□□□□□ -1.15
VPS9D1-204ENST00000565023 ELOF1P60002 83 aaKnown RBP7.87□□□□□ -1.15
VPS9D1-204ENST00000565023 COX7BP24311 80 aa7.86□□□□□ -1.15
VPS9D1-204ENST00000565023 LINC00483Q53H64 154 aa7.86□□□□□ -1.15
VPS9D1-204ENST00000565023 C4orf48Q5BLP8 95 aa7.86□□□□□ -1.15
VPS9D1-204ENST00000565023 IGLV9-49A0A0B4J1Y8 123 aa7.85□□□□□ -1.15
VPS9D1-204ENST00000565023 Q8NBF4 154 aa7.85□□□□□ -1.15
VPS9D1-204ENST00000565023 SMIM11BQ8TCY0 68 aa7.85□□□□□ -1.15
VPS9D1-204ENST00000565023 TAL2Q16559 108 aa7.84□□□□□ -1.15
VPS9D1-204ENST00000565023 DHRS4-AS1Q9P1J3 65 aa7.84□□□□□ -1.15
VPS9D1-204ENST00000565023 A0A1B0GWB2 263 aa7.83□□□□□ -1.16
VPS9D1-204ENST00000565023 MOBPQ13875 183 aa7.83□□□□□ -1.16
VPS9D1-204ENST00000565023 C12orf57Q99622 126 aa7.83□□□□□ -1.16
VPS9D1-204ENST00000565023 IGLV7-46A0A075B6I9 117 aa7.82□□□□□ -1.16
VPS9D1-204ENST00000565023 SPAG11AQ6PDA7 123 aa7.81□□□□□ -1.16
VPS9D1-204ENST00000565023 CEND1Q8N111 149 aa7.81□□□□□ -1.16
VPS9D1-204ENST00000565023 ST20-AS1Q8NBB2 130 aa7.81□□□□□ -1.16
VPS9D1-204ENST00000565023 CFC1BP0CG36 223 aa7.8□□□□□ -1.16
VPS9D1-204ENST00000565023 CFC1P0CG37 223 aa7.8□□□□□ -1.16
VPS9D1-204ENST00000565023 C9orf153Q5TBE3 101 aa7.79□□□□□ -1.16
VPS9D1-204ENST00000565023 CDIP1Q9H305 208 aa7.79□□□□□ -1.16
VPS9D1-204ENST00000565023 UQCR10Q9UDW1 63 aa7.79□□□□□ -1.16
VPS9D1-204ENST00000565023 A0A0B4J2C4 111 aa7.78□□□□□ -1.16
VPS9D1-204ENST00000565023 SPRR1BP22528 89 aa7.78□□□□□ -1.16
VPS9D1-204ENST00000565023 FXYD2P54710 66 aa7.77□□□□□ -1.17
VPS9D1-204ENST00000565023 HSD52Q0P140 79 aa7.77□□□□□ -1.17
VPS9D1-204ENST00000565023 VAMP3Q15836 100 aa7.77□□□□□ -1.17
VPS9D1-204ENST00000565023 RAB37Q96AX2 223 aa7.77□□□□□ -1.17
VPS9D1-204ENST00000565023 TMEM238LA0A1B0GVL6 79 aa7.76□□□□□ -1.17
VPS9D1-204ENST00000565023 A6NJY4 79 aa7.76□□□□□ -1.17
VPS9D1-204ENST00000565023 SMIM6P0DI80 62 aa7.76□□□□□ -1.17
VPS9D1-204ENST00000565023 CTAG1AP78358 180 aa7.76□□□□□ -1.17
VPS9D1-204ENST00000565023 NHP2Q9NX24 153 aaKnown RBP7.76□□□□□ -1.17
VPS9D1-204ENST00000565023 LINC00575Q6W349 94 aa7.75□□□□□ -1.17
VPS9D1-204ENST00000565023 SSBP3-AS1Q7Z2R9 100 aa7.75□□□□□ -1.17
VPS9D1-204ENST00000565023 IGLV5-48A0A075B6I7 105 aa7.74□□□□□ -1.17
VPS9D1-204ENST00000565023 SPINK1P00995 79 aa7.74□□□□□ -1.17
VPS9D1-204ENST00000565023 TPRXLQ17RH7 258 aa7.74□□□□□ -1.17
VPS9D1-204ENST00000565023 BVES-AS1Q5T3Y7 98 aa7.74□□□□□ -1.17
VPS9D1-204ENST00000565023 H7C2G1 150 aa7.73□□□□□ -1.17
VPS9D1-204ENST00000565023 SLC25A20O43772 301 aa7.73□□□□□ -1.17
VPS9D1-204ENST00000565023 LINC01547P58512 204 aaPredicted RBP7.73□□□□□ -1.17
VPS9D1-204ENST00000565023 LCE2AQ5TA79 106 aaPredicted RBP7.73□□□□□ -1.17
VPS9D1-204ENST00000565023 PRO1854Q9UHT4 67 aa7.73□□□□□ -1.17
VPS9D1-204ENST00000565023 TEX49A0A1B0GTD5 131 aa7.72□□□□□ -1.17
VPS9D1-204ENST00000565023 LOC105371267A0A1B0GV96 52 aa7.72□□□□□ -1.17
VPS9D1-204ENST00000565023 DEFB105AQ8NG35 78 aa7.72□□□□□ -1.17
VPS9D1-204ENST00000565023 hADV29S1A0JD25 119 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms