RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 Q9BRP9 147 aa5.73□□□□□ -1.49
CMTM3-209ENST00000565003 SPANXB1Q9NS25 103 aaPredicted RBP5.73□□□□□ -1.49
CMTM3-209ENST00000565003 GAGE2AQ6NT46 116 aa5.72□□□□□ -1.49
CMTM3-209ENST00000565003 Q6ZRX8 168 aa5.72□□□□□ -1.49
CMTM3-209ENST00000565003 MIEN1Q9BRT3 115 aa5.72□□□□□ -1.49
CMTM3-209ENST00000565003 A0A0J9YXY3 114 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 A4D1N5 150 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 E9PLD3 99 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 HIST1H2BKO60814 126 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 NDUFC2O95298 119 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 IGLV6-57P01721 117 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 HIST1H2BJP06899 126 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 HIST1H2BOP23527 126 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 HIST1H2BBP33778 126 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 HIST1H2BDP58876 126 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 NPC2P61916 151 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 HIST1H2BCP62807 126 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 HIST2H2BEQ16778 126 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.71□□□□□ -1.5
CMTM3-209ENST00000565003 ADAMTSL4-AS1Q5T5F5 129 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 HIST1H2BHQ93079 126 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 HIST1H2BNQ99877 126 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 HIST1H2BMQ99879 126 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 CDIP1Q9H305 208 aa5.71□□□□□ -1.5
CMTM3-209ENST00000565003 SYS1-DBNDD2H3BUS1 97 aa5.7□□□□□ -1.5
CMTM3-209ENST00000565003 S100A7L2Q5SY68 101 aa5.7□□□□□ -1.5
CMTM3-209ENST00000565003 TRAV23DV6A0A075B6W5 121 aa5.69□□□□□ -1.5
CMTM3-209ENST00000565003 MOBPQ13875 183 aa5.69□□□□□ -1.5
CMTM3-209ENST00000565003 IGLV9-49A0A0B4J1Y8 123 aa5.68□□□□□ -1.5
CMTM3-209ENST00000565003 A0A0U1RQV1 116 aa5.68□□□□□ -1.5
CMTM3-209ENST00000565003 PCP4L1A6NKN8 68 aa5.68□□□□□ -1.5
CMTM3-209ENST00000565003 LINC01545Q5VT33 79 aa5.68□□□□□ -1.5
CMTM3-209ENST00000565003 FP248Q71RG6 208 aaPredicted RBP5.68□□□□□ -1.5
CMTM3-209ENST00000565003 LITAFQ99732 161 aa5.68□□□□□ -1.5
CMTM3-209ENST00000565003 ZNF73O43830 326 aaPredicted RBP5.67□□□□□ -1.5
CMTM3-209ENST00000565003 SPINK1P00995 79 aa5.67□□□□□ -1.5
CMTM3-209ENST00000565003 KRTAP13-3Q3SY46 172 aa5.66□□□□□ -1.5
CMTM3-209ENST00000565003 LINC00308Q8TCZ7 52 aa5.66□□□□□ -1.5
CMTM3-209ENST00000565003 MUC17Q685J3 4493 aa5.66□□□□□ -1.5
CMTM3-209ENST00000565003 JOSD1Q15040 202 aaPredicted RBP5.65□□□□□ -1.5
CMTM3-209ENST00000565003 SSBP3-AS1Q7Z2R9 100 aa5.65□□□□□ -1.5
CMTM3-209ENST00000565003 ST20-AS1Q8NBB2 130 aa5.65□□□□□ -1.5
CMTM3-209ENST00000565003 TTTY13Q9BZ97 58 aa5.65□□□□□ -1.5
CMTM3-209ENST00000565003 SPANXCQ9NY87 97 aa5.65□□□□□ -1.5
CMTM3-209ENST00000565003 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
CMTM3-209ENST00000565003 ZNF815PA8K554 130 aa5.64□□□□□ -1.51
CMTM3-209ENST00000565003 TIMM17BO60830 172 aa5.64□□□□□ -1.51
CMTM3-209ENST00000565003 Q8N377 158 aa5.64□□□□□ -1.51
CMTM3-209ENST00000565003 KRTAP4-6Q9BYQ5 205 aa5.64□□□□□ -1.51
CMTM3-209ENST00000565003 C3orf79P0CE67 100 aa5.63□□□□□ -1.51
CMTM3-209ENST00000565003 RPS29P62273 56 aaKnown RBP5.63□□□□□ -1.51
CMTM3-209ENST00000565003 C9orf153Q5TBE3 101 aa5.63□□□□□ -1.51
CMTM3-209ENST00000565003 FAT4Q6V0I7 4981 aa5.62□□□□□ -1.51
CMTM3-209ENST00000565003 OR13C6PQ8NH95 151 aa5.62□□□□□ -1.51
CMTM3-209ENST00000565003 HINT1P49773 126 aaPredicted RBP5.61□□□□□ -1.51
CMTM3-209ENST00000565003 KRTDAPP60985 99 aa5.61□□□□□ -1.51
CMTM3-209ENST00000565003 COA6Q5JTJ3 125 aaKnown RBP5.61□□□□□ -1.51
CMTM3-209ENST00000565003 SPANXDQ9BXN6 97 aa5.61□□□□□ -1.51
CMTM3-209ENST00000565003 C5orf52A6NGY3 159 aa5.6□□□□□ -1.51
CMTM3-209ENST00000565003 SLC25A20O43772 301 aa5.6□□□□□ -1.51
CMTM3-209ENST00000565003 SPRR1BP22528 89 aa5.59□□□□□ -1.51
CMTM3-209ENST00000565003 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
CMTM3-209ENST00000565003 C12orf57Q99622 126 aa5.59□□□□□ -1.51
CMTM3-209ENST00000565003 DHRS4-AS1Q9P1J3 65 aa5.59□□□□□ -1.51
CMTM3-209ENST00000565003 ELOF1P60002 83 aaKnown RBP5.58□□□□□ -1.52
CMTM3-209ENST00000565003 C6orf99Q4VX62 202 aa5.58□□□□□ -1.52
CMTM3-209ENST00000565003 ATOH7Q8N100 152 aa5.58□□□□□ -1.52
CMTM3-209ENST00000565003 SMIM6P0DI80 62 aa5.57□□□□□ -1.52
CMTM3-209ENST00000565003 COX7BP24311 80 aa5.57□□□□□ -1.52
CMTM3-209ENST00000565003 SCGB1D4Q6XE38 83 aa5.57□□□□□ -1.52
CMTM3-209ENST00000565003 KRTAP4-1Q9BYQ7 146 aa5.57□□□□□ -1.52
CMTM3-209ENST00000565003 C20orf202A1L168 122 aa5.56□□□□□ -1.52
CMTM3-209ENST00000565003 SLC25A34Q6PIV7 304 aa5.55□□□□□ -1.52
CMTM3-209ENST00000565003 HRCT1Q6UXD1 115 aa5.55□□□□□ -1.52
CMTM3-209ENST00000565003 PCP2Q8IVA1 136 aa5.55□□□□□ -1.52
CMTM3-209ENST00000565003 IFITM1P13164 125 aa5.54□□□□□ -1.52
CMTM3-209ENST00000565003 SEC61BP60468 96 aaKnown RBP5.54□□□□□ -1.52
CMTM3-209ENST00000565003 Q1RN00 199 aa5.54□□□□□ -1.52
CMTM3-209ENST00000565003 XP32Q5T750 250 aa5.54□□□□□ -1.52
CMTM3-209ENST00000565003 DEFB105AQ8NG35 78 aa5.54□□□□□ -1.52
CMTM3-209ENST00000565003 KRTAP9-2Q9BYQ4 174 aa5.54□□□□□ -1.52
CMTM3-209ENST00000565003 LAMTOR3Q9UHA4 124 aa5.54□□□□□ -1.52
CMTM3-209ENST00000565003 TRBV7-6A0A0J9YX20 115 aa5.53□□□□□ -1.52
CMTM3-209ENST00000565003 MUSTN1Q8IVN3 82 aa5.53□□□□□ -1.52
CMTM3-209ENST00000565003 A0A1B0GWB2 263 aa5.52□□□□□ -1.53
CMTM3-209ENST00000565003 A6NDN8 102 aa5.52□□□□□ -1.53
CMTM3-209ENST00000565003 LINC01547P58512 204 aaPredicted RBP5.52□□□□□ -1.53
CMTM3-209ENST00000565003 TAL2Q16559 108 aa5.52□□□□□ -1.53
CMTM3-209ENST00000565003 Q6ZVH6 145 aa5.52□□□□□ -1.53
CMTM3-209ENST00000565003 SMIM29Q86T20 159 aa5.52□□□□□ -1.53
CMTM3-209ENST00000565003 COPS9Q8WXC6 57 aa5.52□□□□□ -1.53
CMTM3-209ENST00000565003 LIMD2Q9BT23 127 aa5.52□□□□□ -1.53
CMTM3-209ENST00000565003 TEX49A0A1B0GTD5 131 aa5.51□□□□□ -1.53
CMTM3-209ENST00000565003 IGLV5-48A0A075B6I7 105 aa5.5□□□□□ -1.53
CMTM3-209ENST00000565003 A0A0G2JQZ4 141 aa5.49□□□□□ -1.53
CMTM3-209ENST00000565003 H7C2G1 150 aa5.49□□□□□ -1.53
CMTM3-209ENST00000565003 AKR1D1P51857 326 aa5.49□□□□□ -1.53
CMTM3-209ENST00000565003 CD164Q04900 197 aa5.49□□□□□ -1.53
CMTM3-209ENST00000565003 HIST3H2BBQ8N257 126 aa5.49□□□□□ -1.53
CMTM3-209ENST00000565003 SMIM11BQ8TCY0 68 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms