RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 CRYGAP11844 174 aa2.37□□□□□ -2.03
CHD9-213ENST00000564845 RBM12B-AS1Q9P1G2 102 aa2.37□□□□□ -2.03
CHD9-213ENST00000564845 WIPF1O43516 503 aa2.37□□□□□ -2.03
CHD9-213ENST00000564845 A0A0J9YWU9 116 aa2.37□□□□□ -2.03
CHD9-213ENST00000564845 IGHV4-30-4P0DP06 118 aa2.37□□□□□ -2.03
CHD9-213ENST00000564845 FAM19A1Q7Z5A9 133 aa2.37□□□□□ -2.03
CHD9-213ENST00000564845 H0Y9J4 135 aa2.37□□□□□ -2.03
CHD9-213ENST00000564845 COX6A2Q02221 97 aa2.37□□□□□ -2.03
CHD9-213ENST00000564845 CDKN2A-AS1Q9UH64 79 aa2.37□□□□□ -2.03
CHD9-213ENST00000564845 STARD9Q9P2P6 4700 aa2.37□□□□□ -2.03
CHD9-213ENST00000564845 IGLV4-3A0A075B6K6 122 aa2.37□□□□□ -2.03
CHD9-213ENST00000564845 POLR2KP53803 58 aaKnown RBP2.37□□□□□ -2.03
CHD9-213ENST00000564845 KIAA0087Q14695 138 aa2.37□□□□□ -2.03
CHD9-213ENST00000564845 C16orf90A8MZG2 172 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 PRR3P79522 188 aaKnown RBP2.36□□□□□ -2.03
CHD9-213ENST00000564845 NCR3O14931 201 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 FXYD2P54710 66 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 TSPEAR-AS2P59090 65 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 SPANXA2-OT1Q8N9U9 137 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 SMIM26A0A096LP01 95 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 SPINK1P00995 79 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.36□□□□□ -2.03
CHD9-213ENST00000564845 FAT2Q9NYQ8 4349 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 TRAV22A0A0B4J277 110 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 PLA2G2DQ9UNK4 145 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 KIF25-AS1Q9Y6Z4 181 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 TMEM254Q8TBM7 123 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 ODF3L2Q3SX64 289 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 NTM-AS1Q6ZSK4 140 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 FAM104AQ969W3 186 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 A0A0J9YXV3 536 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 SSBP3-AS1Q7Z2R9 100 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 LINC00337Q8N6G1 96 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 Q8NBF4 154 aa2.36□□□□□ -2.03
CHD9-213ENST00000564845 IGHV3-33P01772 117 aa2.35□□□□□ -2.03
CHD9-213ENST00000564845 A8MTW9 85 aa2.35□□□□□ -2.03
CHD9-213ENST00000564845 TLX1NBP0CAT3 122 aa2.35□□□□□ -2.03
CHD9-213ENST00000564845 M0R2N4 97 aa2.35□□□□□ -2.03
CHD9-213ENST00000564845 ASB16-AS1Q495Z4 193 aa2.35□□□□□ -2.03
CHD9-213ENST00000564845 KLK12Q9UKR0 248 aa2.35□□□□□ -2.03
CHD9-213ENST00000564845 C9orf116Q5BN46 136 aaPredicted RBP2.35□□□□□ -2.03
CHD9-213ENST00000564845 ATP11AUNQ6ZP68 121 aa2.35□□□□□ -2.03
CHD9-213ENST00000564845 HUWE1Q7Z6Z7 4374 aaKnown RBP2.35□□□□□ -2.03
CHD9-213ENST00000564845 FLG2Q5D862 2391 aaPredicted RBP2.35□□□□□ -2.03
CHD9-213ENST00000564845 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.35□□□□□ -2.03
CHD9-213ENST00000564845 TSHBP01222 138 aa2.35□□□□□ -2.03
CHD9-213ENST00000564845 C2orf91Q6ZV80 131 aa2.35□□□□□ -2.03
CHD9-213ENST00000564845 PRKDCP78527 4128 aaKnown RBP2.35□□□□□ -2.03
CHD9-213ENST00000564845 PLECQ15149 4684 aaKnown RBP2.35□□□□□ -2.03
CHD9-213ENST00000564845 C1orf158Q8N1D5 194 aa2.34□□□□□ -2.03
CHD9-213ENST00000564845 A0A087X002 238 aa2.34□□□□□ -2.03
CHD9-213ENST00000564845 Q8N814 137 aa2.34□□□□□ -2.03
CHD9-213ENST00000564845 KLKP1Q107X0 134 aa2.34□□□□□ -2.04
CHD9-213ENST00000564845 C11orf72Q8NBR9 251 aa2.34□□□□□ -2.04
CHD9-213ENST00000564845 RETNLBQ9BQ08 111 aa2.34□□□□□ -2.04
CHD9-213ENST00000564845 LINC01547P58512 204 aaPredicted RBP2.34□□□□□ -2.04
CHD9-213ENST00000564845 CDC42SE2Q9NRR3 84 aa2.34□□□□□ -2.04
CHD9-213ENST00000564845 LRP1BQ9NZR2 4599 aa2.34□□□□□ -2.04
CHD9-213ENST00000564845 HECTD4Q9Y4D8 3996 aa2.33□□□□□ -2.04
CHD9-213ENST00000564845 IGLV4-60A0A075B6I1 120 aa2.33□□□□□ -2.04
CHD9-213ENST00000564845 RPS29P62273 56 aaKnown RBP2.33□□□□□ -2.04
CHD9-213ENST00000564845 C7orf65Q6ZTY9 151 aa2.33□□□□□ -2.04
CHD9-213ENST00000564845 DNAH6Q9C0G6 4158 aa2.33□□□□□ -2.04
CHD9-213ENST00000564845 KPRPQ5T749 579 aaPredicted RBP2.33□□□□□ -2.04
CHD9-213ENST00000564845 C1orf134Q5TEV5 83 aa2.33□□□□□ -2.04
CHD9-213ENST00000564845 IGLV5-39A0A0G2JS06 123 aa2.33□□□□□ -2.04
CHD9-213ENST00000564845 DNAH10OSP0CZ25 163 aa2.33□□□□□ -2.04
CHD9-213ENST00000564845 C1orf137Q5JT78 98 aa2.33□□□□□ -2.04
CHD9-213ENST00000564845 PRO0628Q9UI54 55 aa2.33□□□□□ -2.04
CHD9-213ENST00000564845 Q6ZRX8 168 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 C6orf223Q8N319 242 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 KRTAP10-11P60412 298 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 KIAA1109Q2LD37 5005 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 IGLV2-18A0A075B6J9 118 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 LINC00315P59091 139 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 IGIPA6NJ69 53 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 SMIM1B2RUZ4 78 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 GIG44P09565 113 aaPredicted RBP2.32□□□□□ -2.04
CHD9-213ENST00000564845 SPACA4Q8TDM5 124 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 Q9HAA7 133 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 ADAMTSL4-AS1Q5T5F5 129 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 SDIM1Q6ZPB5 146 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 A6NED7 52 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 KRTAP21-3Q3LHN1 58 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 KRTAP24-1Q3LI83 254 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 LINC00575Q6W349 94 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 WWC2-AS2Q96NR7 200 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 VPS13DQ5THJ4 4388 aa2.32□□□□□ -2.04
CHD9-213ENST00000564845 DNAH2Q9P225 4427 aa2.31□□□□□ -2.04
CHD9-213ENST00000564845 Q6ZTC4 211 aa2.31□□□□□ -2.04
CHD9-213ENST00000564845 FAM19A4Q96LR4 140 aa2.31□□□□□ -2.04
CHD9-213ENST00000564845 IGLV1-50A0A075B6I6 118 aa2.31□□□□□ -2.04
CHD9-213ENST00000564845 LINC00959A0A1B0GUT2 108 aa2.31□□□□□ -2.04
CHD9-213ENST00000564845 NANOS2P60321 138 aaKnown RBP2.31□□□□□ -2.04
CHD9-213ENST00000564845 WFDC2Q14508 124 aa2.31□□□□□ -2.04
CHD9-213ENST00000564845 Q6ZVQ6 151 aa2.31□□□□□ -2.04
CHD9-213ENST00000564845 SLPIP03973 132 aa2.3□□□□□ -2.04
CHD9-213ENST00000564845 FAM229BQ4G0N7 80 aa2.3□□□□□ -2.04
CHD9-213ENST00000564845 TRIAP1O43715 76 aa2.3□□□□□ -2.04
CHD9-213ENST00000564845 DNAH11Q96DT5 4516 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms