RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 IGKV1-17P01599 117 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 IGHV1-8P0DP01 117 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 FP248Q71RG6 208 aaPredicted RBP2.29□□□□□ -2.04
CHD9-212ENST00000564641 FAM19A1Q7Z5A9 133 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 GPHB5Q86YW7 130 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 Q8N9W7 124 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 GAFA1Q96PS6 74 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 CAMK2N2Q96S95 79 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 NDUFA12Q9UI09 145 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 PHLDA3Q9Y5J5 127 aa2.29□□□□□ -2.04
CHD9-212ENST00000564641 CMYA5Q8N3K9 4069 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.28□□□□□ -2.04
CHD9-212ENST00000564641 TRAV21A0A0B4J279 112 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 TRBV10-3A0A0K0K1G6 114 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 F8WEM9 126 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 BUB1B-PAK6H3BSN5 160 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 TRBV12-3P01733 135 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 CCKP06307 115 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 IGHV3-30-3P0DP02 117 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 RPL28P46779 137 aaKnown RBP2.28□□□□□ -2.04
CHD9-212ENST00000564641 POLR2KP53803 58 aaKnown RBP2.28□□□□□ -2.04
CHD9-212ENST00000564641 SNRPD3P62318 126 aaKnown RBP2.28□□□□□ -2.04
CHD9-212ENST00000564641 RPL39P62891 51 aaKnown RBP2.28□□□□□ -2.04
CHD9-212ENST00000564641 ATP5EP2Q5VTU8 51 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 PRR15Q8IV56 129 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 C1orf158Q8N1D5 194 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 LINC00846Q9NV44 126 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 LINC00474Q9P2X8 69 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 DSCAML1Q8TD84 2053 aa2.28□□□□□ -2.04
CHD9-212ENST00000564641 IGHV3-72A0A0B4J1Y9 119 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 TRAV13-2A0A0B4J235 113 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 TRBV27A0A0K0K1C4 114 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 A0A1B0GVX0 72 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 ODF3BA8MYP8 253 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 H0YGX0 51 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 H7BZZ5 65 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 K7EIM0 57 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 CD28P10747 220 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 DAD1P61803 113 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 SS18Q15532 418 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 LYPD5Q6UWN5 251 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 LINC00308Q8TCZ7 52 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 RNF5Q99942 180 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 LENEPQ9Y5L5 61 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 NBEAL2Q6ZNJ1 2754 aa2.27□□□□□ -2.05
CHD9-212ENST00000564641 TRBV6-5A0A0K0K1A5 114 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 BPY2O14599 106 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 PSPHP1O15172 72 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 GNRH2O43555 120 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 CCL3L1P16619 93 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 RNASE4P34096 147 aaKnown RBP2.26□□□□□ -2.05
CHD9-212ENST00000564641 BLCAPP62952 87 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 KLKP1Q107X0 134 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 IGFL1Q6UW32 110 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 ENHOQ6UWT2 76 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 SOSTDC1Q6X4U4 206 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 MUC7Q8TAX7 377 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 DYNLRB2Q8TF09 96 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 DEFB104AQ8WTQ1 72 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 C4orf3Q8WVX3 66 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 RMI2Q96E14 147 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 UBL5Q9BZL1 73 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 C11orf68Q9H3H3 251 aaKnown RBP2.26□□□□□ -2.05
CHD9-212ENST00000564641 C14orf132Q9NPU4 83 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 C22orf24Q9Y442 160 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 SNURFQ9Y675 71 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 S4R3C0 116 aa2.26□□□□□ -2.05
CHD9-212ENST00000564641 IGHV1-3A0A0C4DH29 117 aa2.25□□□□□ -2.05
CHD9-212ENST00000564641 JMJD7-PLA2G4BH0Y9G9 81 aa2.25□□□□□ -2.05
CHD9-212ENST00000564641 K7EIL1 84 aa2.25□□□□□ -2.05
CHD9-212ENST00000564641 NCR3O14931 201 aa2.25□□□□□ -2.05
CHD9-212ENST00000564641 NDUFA1O15239 70 aa2.25□□□□□ -2.05
CHD9-212ENST00000564641 TLX1NBP0CAT3 122 aa2.25□□□□□ -2.05
CHD9-212ENST00000564641 MIFP14174 115 aa2.25□□□□□ -2.05
CHD9-212ENST00000564641 Q6ZRU5 148 aa2.25□□□□□ -2.05
CHD9-212ENST00000564641 OBSCN-AS1Q96MR7 158 aa2.25□□□□□ -2.05
CHD9-212ENST00000564641 ORMDL1Q9P0S3 153 aa2.25□□□□□ -2.05
CHD9-212ENST00000564641 STAB2Q8WWQ8 2551 aa2.25□□□□□ -2.05
CHD9-212ENST00000564641 PRKDCP78527 4128 aaKnown RBP2.24□□□□□ -2.05
CHD9-212ENST00000564641 IBA57-AS1B1ANH7 110 aa2.24□□□□□ -2.05
CHD9-212ENST00000564641 CRPP02741 224 aa2.24□□□□□ -2.05
CHD9-212ENST00000564641 FUSP35637 526 aaKnown RBP eCLIP2.24□□□□□ -2.05
CHD9-212ENST00000564641 ESRGQ1W209 222 aa2.24□□□□□ -2.05
CHD9-212ENST00000564641 NTM-AS1Q6ZSK4 140 aa2.24□□□□□ -2.05
CHD9-212ENST00000564641 C5orf56Q8N8D9 126 aa2.24□□□□□ -2.05
CHD9-212ENST00000564641 ZNF625Q96I27 306 aaPredicted RBP2.24□□□□□ -2.05
CHD9-212ENST00000564641 TNCP24821 2201 aa2.23□□□□□ -2.05
CHD9-212ENST00000564641 COL7A1Q02388 2944 aa2.23□□□□□ -2.05
CHD9-212ENST00000564641 TRAV10A0A0B4J240 114 aa2.23□□□□□ -2.05
CHD9-212ENST00000564641 H3BUA1 57 aa2.23□□□□□ -2.05
CHD9-212ENST00000564641 NDUFS5O43920 106 aa2.23□□□□□ -2.05
CHD9-212ENST00000564641 CTSGP08311 255 aa2.23□□□□□ -2.05
CHD9-212ENST00000564641 RNASE3P12724 160 aaKnown RBP2.23□□□□□ -2.05
CHD9-212ENST00000564641 HAMPP81172 84 aa2.23□□□□□ -2.05
CHD9-212ENST00000564641 PRB3Q04118 309 aaPredicted RBP2.23□□□□□ -2.05
CHD9-212ENST00000564641 FAM229BQ4G0N7 80 aa2.23□□□□□ -2.05
CHD9-212ENST00000564641 PRR9Q5T870 116 aa2.23□□□□□ -2.05
CHD9-212ENST00000564641 IGHV3OR16-8A0A075B7F1 116 aa2.22□□□□□ -2.05
CHD9-212ENST00000564641 TMEM256-PLSCR3K7ERE1 68 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms