RNA–Protein interactions for RNA: ENST00000564333.1

CCNF-204, Transcript of cyclin F, humanhuman

Gene CCNF, Length 1,937 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-204ENST00000564333 ZNF73O43830 326 aaPredicted RBP10.86□□□□□ -0.67
CCNF-204ENST00000564333 Q6ZQY7 126 aa10.84□□□□□ -0.67
CCNF-204ENST00000564333 RMI2Q96E14 147 aa10.84□□□□□ -0.67
CCNF-204ENST00000564333 COX7BP24311 80 aa10.83□□□□□ -0.68
CCNF-204ENST00000564333 CXCL6P80162 114 aa10.83□□□□□ -0.68
CCNF-204ENST00000564333 ELOF1P60002 83 aaKnown RBP10.82□□□□□ -0.68
CCNF-204ENST00000564333 CASC10Q5T4H9 136 aa10.82□□□□□ -0.68
CCNF-204ENST00000564333 NBEAL1Q6ZS30 2694 aa10.82□□□□□ -0.68
CCNF-204ENST00000564333 DNAH1Q9P2D7 4330 aa10.82□□□□□ -0.68
CCNF-204ENST00000564333 FAM19A1Q7Z5A9 133 aa10.8□□□□□ -0.68
CCNF-204ENST00000564333 TLX1NBP0CAT3 122 aa10.79□□□□□ -0.68
CCNF-204ENST00000564333 LINC01547P58512 204 aaPredicted RBP10.79□□□□□ -0.68
CCNF-204ENST00000564333 Q6ZVQ6 151 aa10.79□□□□□ -0.68
CCNF-204ENST00000564333 TRAV7A0A075B6U4 112 aa10.78□□□□□ -0.68
CCNF-204ENST00000564333 NKAPP1Q8N9T2 125 aa10.78□□□□□ -0.68
CCNF-204ENST00000564333 TRBV7-4A0A0J9YYF1 115 aa10.77□□□□□ -0.69
CCNF-204ENST00000564333 LOC107984640A0A0U1RRK4 108 aa10.76□□□□□ -0.69
CCNF-204ENST00000564333 SERTAD4-AS1Q5TG53 156 aa10.76□□□□□ -0.69
CCNF-204ENST00000564333 DPH3Q96FX2 82 aa10.76□□□□□ -0.69
CCNF-204ENST00000564333 HAMPP81172 84 aa10.75□□□□□ -0.69
CCNF-204ENST00000564333 CYSTM1Q9H1C7 97 aa10.75□□□□□ -0.69
CCNF-204ENST00000564333 LINC00528Q8N1L1 170 aa10.74□□□□□ -0.69
CCNF-204ENST00000564333 PLA2G2DQ9UNK4 145 aa10.74□□□□□ -0.69
CCNF-204ENST00000564333 C7orf33Q8WU49 177 aa10.73□□□□□ -0.69
CCNF-204ENST00000564333 FAM19A5Q7Z5A7 132 aaPredicted RBP10.72□□□□□ -0.69
CCNF-204ENST00000564333 B9D2Q9BPU9 175 aa10.71□□□□□ -0.69
CCNF-204ENST00000564333 KCNQ1DNQ9H478 68 aa10.71□□□□□ -0.69
CCNF-204ENST00000564333 DNAH9Q9NYC9 4486 aa10.71□□□□□ -0.7
CCNF-204ENST00000564333 UBE2DNLQ8IWF7 75 aa10.7□□□□□ -0.7
CCNF-204ENST00000564333 IGLV5-37A0A075B6J1 123 aa10.7□□□□□ -0.7
CCNF-204ENST00000564333 KRTAP1-5Q9BYS1 174 aa10.7□□□□□ -0.7
CCNF-204ENST00000564333 FAM168BA1KXE4 195 aa10.69□□□□□ -0.7
CCNF-204ENST00000564333 C20orf197Q8N268 126 aa10.69□□□□□ -0.7
CCNF-204ENST00000564333 APLNQ9ULZ1 77 aa10.69□□□□□ -0.7
CCNF-204ENST00000564333 M0R2N4 97 aa10.68□□□□□ -0.7
CCNF-204ENST00000564333 KLKP1Q107X0 134 aa10.67□□□□□ -0.7
CCNF-204ENST00000564333 PRYO14603 147 aa10.66□□□□□ -0.7
CCNF-204ENST00000564333 A0A1B0GW54 56 aa10.64□□□□□ -0.71
CCNF-204ENST00000564333 RPL37AP8A6NKH3 93 aa10.64□□□□□ -0.71
CCNF-204ENST00000564333 NDUFC1O43677 76 aa10.64□□□□□ -0.71
CCNF-204ENST00000564333 KRTAP7-1Q8IUC3 87 aa10.64□□□□□ -0.71
CCNF-204ENST00000564333 MEGF8Q7Z7M0 2845 aa10.64□□□□□ -0.71
CCNF-204ENST00000564333 FAM236DA0A1B0GTK5 79 aa10.64□□□□□ -0.71
CCNF-204ENST00000564333 FAM236CP0DP71 79 aa10.64□□□□□ -0.71
CCNF-204ENST00000564333 IGLV1-50A0A075B6I6 118 aa10.63□□□□□ -0.71
CCNF-204ENST00000564333 PSCAO43653 123 aa10.63□□□□□ -0.71
CCNF-204ENST00000564333 C5orf47Q569G3 176 aa10.62□□□□□ -0.71
CCNF-204ENST00000564333 COL7A1Q02388 2944 aa10.62□□□□□ -0.71
CCNF-204ENST00000564333 Q6ZRX8 168 aa10.61□□□□□ -0.71
CCNF-204ENST00000564333 MRPL55Q7Z7F7 128 aaKnown RBP10.61□□□□□ -0.71
CCNF-204ENST00000564333 DYNC2H1Q8NCM8 4307 aaKnown RBP10.61□□□□□ -0.71
CCNF-204ENST00000564333 ERC2-IT1O76042 136 aa10.6□□□□□ -0.71
CCNF-204ENST00000564333 SPRR1AP35321 89 aa10.6□□□□□ -0.71
CCNF-204ENST00000564333 KRTAP4-16G5E9R7 235 aaPredicted RBP10.6□□□□□ -0.71
CCNF-204ENST00000564333 H7BZZ5 65 aa10.6□□□□□ -0.71
CCNF-204ENST00000564333 ETDCA0A1B0GVM5 59 aa10.59□□□□□ -0.71
CCNF-204ENST00000564333 CNBPP62633 177 aaKnown RBP10.59□□□□□ -0.71
CCNF-204ENST00000564333 DHRS4-AS1Q9P1J3 65 aa10.59□□□□□ -0.71
CCNF-204ENST00000564333 SERP1Q9Y6X1 66 aa10.59□□□□□ -0.71
CCNF-204ENST00000564333 ATP5EP56381 51 aaPredicted RBP10.58□□□□□ -0.72
CCNF-204ENST00000564333 NUPR2A6NF83 97 aa10.58□□□□□ -0.72
CCNF-204ENST00000564333 NREPQ16612 68 aa10.58□□□□□ -0.72
CCNF-204ENST00000564333 STAB2Q8WWQ8 2551 aa10.57□□□□□ -0.72
CCNF-204ENST00000564333 LYSTQ99698 3801 aa10.57□□□□□ -0.72
CCNF-204ENST00000564333 A0A096LNI7 61 aa10.56□□□□□ -0.72
CCNF-204ENST00000564333 Q9BRP9 147 aa10.56□□□□□ -0.72
CCNF-204ENST00000564333 DNAH10Q8IVF4 4471 aa10.56□□□□□ -0.72
CCNF-204ENST00000564333 IGLV5-48A0A075B6I7 105 aa10.55□□□□□ -0.72
CCNF-204ENST00000564333 C16orf90A8MZG2 172 aa10.55□□□□□ -0.72
CCNF-204ENST00000564333 C14orf177Q52M58 125 aa10.55□□□□□ -0.72
CCNF-204ENST00000564333 DEFB105AQ8NG35 78 aa10.55□□□□□ -0.72
CCNF-204ENST00000564333 BPY2O14599 106 aa10.54□□□□□ -0.72
CCNF-204ENST00000564333 Q8N377 158 aa10.54□□□□□ -0.72
CCNF-204ENST00000564333 PRKDCP78527 4128 aaKnown RBP10.54□□□□□ -0.72
CCNF-204ENST00000564333 IGKV2-24A0A0C4DH68 120 aa10.54□□□□□ -0.72
CCNF-204ENST00000564333 EPM2AB3EWF7 344 aa10.54□□□□□ -0.72
CCNF-204ENST00000564333 OXTP01178 125 aa10.54□□□□□ -0.72
CCNF-204ENST00000564333 FBN3Q75N90 2809 aa10.54□□□□□ -0.72
CCNF-204ENST00000564333 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.53□□□□□ -0.72
CCNF-204ENST00000564333 FUSP35637 526 aaKnown RBP eCLIP10.52□□□□□ -0.72
CCNF-204ENST00000564333 REG3GQ6UW15 175 aa10.52□□□□□ -0.72
CCNF-204ENST00000564333 SCXQ7RTU7 201 aa10.52□□□□□ -0.72
CCNF-204ENST00000564333 NBDYA0A0U1RRE5 68 aa10.51□□□□□ -0.73
CCNF-204ENST00000564333 IGKV4-1P06312 121 aa10.5□□□□□ -0.73
CCNF-204ENST00000564333 UBE2BP63146 152 aa10.5□□□□□ -0.73
CCNF-204ENST00000564333 ST20-AS1Q8NBB2 130 aa10.49□□□□□ -0.73
CCNF-204ENST00000564333 A0A1W2PNN7 141 aa10.48□□□□□ -0.73
CCNF-204ENST00000564333 F8WEM9 126 aa10.48□□□□□ -0.73
CCNF-204ENST00000564333 SNURFQ9Y675 71 aa10.48□□□□□ -0.73
CCNF-204ENST00000564333 PLECQ15149 4684 aaKnown RBP10.48□□□□□ -0.73
CCNF-204ENST00000564333 Q5XG85 94 aa10.47□□□□□ -0.73
CCNF-204ENST00000564333 TMEM254Q8TBM7 123 aa10.47□□□□□ -0.73
CCNF-204ENST00000564333 LRCOL1A6NCL2 159 aa10.46□□□□□ -0.73
CCNF-204ENST00000564333 CSMD3Q7Z407 3707 aa10.46□□□□□ -0.74
CCNF-204ENST00000564333 CHTF8P0CG12 524 aa10.45□□□□□ -0.74
CCNF-204ENST00000564333 Q6ZRN7 208 aaPredicted RBP10.45□□□□□ -0.74
CCNF-204ENST00000564333 TNP2Q05952 138 aa10.44□□□□□ -0.74
CCNF-204ENST00000564333 OCR1Q9BZK8 76 aa10.44□□□□□ -0.74
CCNF-204ENST00000564333 DNAH7Q8WXX0 4024 aa10.44□□□□□ -0.74
CCNF-204ENST00000564333 SMIM26A0A096LP01 95 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms