RNA–Protein interactions for RNA: ENST00000563720.1

MAP1LC3B-204, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 3

Gene MAP1LC3B, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-204ENST00000563720 SPAG11AQ6PDA7 123 aa9.97□□□□□ -0.81
MAP1LC3B-204ENST00000563720 Q9BRP9 147 aa9.97□□□□□ -0.81
MAP1LC3B-204ENST00000563720 S100A7L2Q5SY68 101 aa9.96□□□□□ -0.82
MAP1LC3B-204ENST00000563720 Q6ZRX8 168 aa9.96□□□□□ -0.82
MAP1LC3B-204ENST00000563720 Q8NBF4 154 aa9.96□□□□□ -0.82
MAP1LC3B-204ENST00000563720 GAGE2AQ6NT46 116 aa9.95□□□□□ -0.82
MAP1LC3B-204ENST00000563720 IGLV7-46A0A075B6I9 117 aa9.94□□□□□ -0.82
MAP1LC3B-204ENST00000563720 PET117Q6UWS5 81 aa9.94□□□□□ -0.82
MAP1LC3B-204ENST00000563720 LITAFQ99732 161 aa9.94□□□□□ -0.82
MAP1LC3B-204ENST00000563720 TRAV23DV6A0A075B6W5 121 aa9.93□□□□□ -0.82
MAP1LC3B-204ENST00000563720 TPRXLQ17RH7 258 aa9.93□□□□□ -0.82
MAP1LC3B-204ENST00000563720 CDIP1Q9H305 208 aa9.93□□□□□ -0.82
MAP1LC3B-204ENST00000563720 C4orf48Q5BLP8 95 aa9.92□□□□□ -0.82
MAP1LC3B-204ENST00000563720 MUC17Q685J3 4493 aa9.91□□□□□ -0.82
MAP1LC3B-204ENST00000563720 TIMM17BO60830 172 aa9.91□□□□□ -0.82
MAP1LC3B-204ENST00000563720 C3orf79P0CE67 100 aa9.91□□□□□ -0.82
MAP1LC3B-204ENST00000563720 COA6Q5JTJ3 125 aaKnown RBP9.91□□□□□ -0.82
MAP1LC3B-204ENST00000563720 LINC00308Q8TCZ7 52 aa9.91□□□□□ -0.82
MAP1LC3B-204ENST00000563720 ZNF73O43830 326 aaPredicted RBP9.9□□□□□ -0.82
MAP1LC3B-204ENST00000563720 TTTY13Q9BZ97 58 aa9.89□□□□□ -0.83
MAP1LC3B-204ENST00000563720 SPANXCQ9NY87 97 aa9.89□□□□□ -0.83
MAP1LC3B-204ENST00000563720 IGLV9-49A0A0B4J1Y8 123 aa9.88□□□□□ -0.83
MAP1LC3B-204ENST00000563720 ZNF815PA8K554 130 aa9.88□□□□□ -0.83
MAP1LC3B-204ENST00000563720 MOBPQ13875 183 aa9.88□□□□□ -0.83
MAP1LC3B-204ENST00000563720 JOSD1Q15040 202 aaPredicted RBP9.88□□□□□ -0.83
MAP1LC3B-204ENST00000563720 SPINK1P00995 79 aa9.87□□□□□ -0.83
MAP1LC3B-204ENST00000563720 KRTDAPP60985 99 aa9.86□□□□□ -0.83
MAP1LC3B-204ENST00000563720 FP248Q71RG6 208 aaPredicted RBP9.86□□□□□ -0.83
MAP1LC3B-204ENST00000563720 SSBP3-AS1Q7Z2R9 100 aa9.86□□□□□ -0.83
MAP1LC3B-204ENST00000563720 ST20-AS1Q8NBB2 130 aa9.84□□□□□ -0.83
MAP1LC3B-204ENST00000563720 CBY1Q9Y3M2 126 aa9.84□□□□□ -0.83
MAP1LC3B-204ENST00000563720 OR13C6PQ8NH95 151 aa9.83□□□□□ -0.84
MAP1LC3B-204ENST00000563720 HINT1P49773 126 aaPredicted RBP9.82□□□□□ -0.84
MAP1LC3B-204ENST00000563720 SPANXDQ9BXN6 97 aa9.82□□□□□ -0.84
MAP1LC3B-204ENST00000563720 C5orf52A6NGY3 159 aa9.81□□□□□ -0.84
MAP1LC3B-204ENST00000563720 RPS29P62273 56 aaKnown RBP9.81□□□□□ -0.84
MAP1LC3B-204ENST00000563720 ANKRD39Q53RE8 183 aa9.81□□□□□ -0.84
MAP1LC3B-204ENST00000563720 KRTAP13-3Q3SY46 172 aa9.8□□□□□ -0.84
MAP1LC3B-204ENST00000563720 C20orf202A1L168 122 aa9.79□□□□□ -0.84
MAP1LC3B-204ENST00000563720 LCE2DQ5TA82 110 aaPredicted RBP9.79□□□□□ -0.84
MAP1LC3B-204ENST00000563720 C9orf153Q5TBE3 101 aa9.79□□□□□ -0.84
MAP1LC3B-204ENST00000563720 LINC00518Q8N0U6 118 aa9.79□□□□□ -0.84
MAP1LC3B-204ENST00000563720 Q8N377 158 aa9.79□□□□□ -0.84
MAP1LC3B-204ENST00000563720 ATOH7Q8N100 152 aa9.78□□□□□ -0.84
MAP1LC3B-204ENST00000563720 SPRR1BP22528 89 aa9.77□□□□□ -0.85
MAP1LC3B-204ENST00000563720 SCGB1D4Q6XE38 83 aa9.77□□□□□ -0.85
MAP1LC3B-204ENST00000563720 DHRS4-AS1Q9P1J3 65 aa9.77□□□□□ -0.85
MAP1LC3B-204ENST00000563720 CRCT1Q9UGL9 99 aa9.77□□□□□ -0.85
MAP1LC3B-204ENST00000563720 LINC01547P58512 204 aaPredicted RBP9.76□□□□□ -0.85
MAP1LC3B-204ENST00000563720 COX7BP24311 80 aa9.75□□□□□ -0.85
MAP1LC3B-204ENST00000563720 ELOF1P60002 83 aaKnown RBP9.75□□□□□ -0.85
MAP1LC3B-204ENST00000563720 C6orf99Q4VX62 202 aa9.75□□□□□ -0.85
MAP1LC3B-204ENST00000563720 SLC25A20O43772 301 aa9.74□□□□□ -0.85
MAP1LC3B-204ENST00000563720 PCP2Q8IVA1 136 aa9.74□□□□□ -0.85
MAP1LC3B-204ENST00000563720 IFITM1P13164 125 aa9.73□□□□□ -0.85
MAP1LC3B-204ENST00000563720 COPS9Q8WXC6 57 aa9.72□□□□□ -0.85
MAP1LC3B-204ENST00000563720 AKR1D1P51857 326 aa9.71□□□□□ -0.86
MAP1LC3B-204ENST00000563720 Q6ZVH6 145 aa9.71□□□□□ -0.86
MAP1LC3B-204ENST00000563720 MUSTN1Q8IVN3 82 aa9.71□□□□□ -0.86
MAP1LC3B-204ENST00000563720 FSIP2Q5CZC0 6907 aa9.7□□□□□ -0.86
MAP1LC3B-204ENST00000563720 TRBV7-6A0A0J9YX20 115 aa9.7□□□□□ -0.86
MAP1LC3B-204ENST00000563720 SLC25A34Q6PIV7 304 aa9.7□□□□□ -0.86
MAP1LC3B-204ENST00000563720 HIST3H2BBQ8N257 126 aa9.68□□□□□ -0.86
MAP1LC3B-204ENST00000563720 LAMTOR3Q9UHA4 124 aa9.68□□□□□ -0.86
MAP1LC3B-204ENST00000563720 A6NDN8 102 aa9.67□□□□□ -0.86
MAP1LC3B-204ENST00000563720 SNRPEP62304 92 aaKnown RBP9.67□□□□□ -0.86
MAP1LC3B-204ENST00000563720 ASB16-AS1Q495Z4 193 aa9.67□□□□□ -0.86
MAP1LC3B-204ENST00000563720 HIST1H2BLQ99880 126 aa9.67□□□□□ -0.86
MAP1LC3B-204ENST00000563720 A0A1B0GWB2 263 aa9.66□□□□□ -0.86
MAP1LC3B-204ENST00000563720 TAL2Q16559 108 aa9.66□□□□□ -0.86
MAP1LC3B-204ENST00000563720 DEFB105AQ8NG35 78 aa9.66□□□□□ -0.86
MAP1LC3B-204ENST00000563720 HRCT1Q6UXD1 115 aa9.65□□□□□ -0.86
MAP1LC3B-204ENST00000563720 TEX49A0A1B0GTD5 131 aa9.64□□□□□ -0.87
MAP1LC3B-204ENST00000563720 Q1RN00 199 aa9.64□□□□□ -0.87
MAP1LC3B-204ENST00000563720 S100A2P29034 98 aa9.63□□□□□ -0.87
MAP1LC3B-204ENST00000563720 SMIM29Q86T20 159 aa9.63□□□□□ -0.87
MAP1LC3B-204ENST00000563720 TRAV13-2A0A0B4J235 113 aa9.62□□□□□ -0.87
MAP1LC3B-204ENST00000563720 LIMD2Q9BT23 127 aa9.62□□□□□ -0.87
MAP1LC3B-204ENST00000563720 IGLV5-48A0A075B6I7 105 aa9.61□□□□□ -0.87
MAP1LC3B-204ENST00000563720 SEC61BP60468 96 aaKnown RBP9.61□□□□□ -0.87
MAP1LC3B-204ENST00000563720 XP32Q5T750 250 aa9.61□□□□□ -0.87
MAP1LC3B-204ENST00000563720 SMIM11BQ8TCY0 68 aa9.61□□□□□ -0.87
MAP1LC3B-204ENST00000563720 A4D1N5 150 aa9.6□□□□□ -0.87
MAP1LC3B-204ENST00000563720 KRTAP4-1Q9BYQ7 146 aa9.6□□□□□ -0.87
MAP1LC3B-204ENST00000563720 CD164Q04900 197 aa9.59□□□□□ -0.87
MAP1LC3B-204ENST00000563720 PRO1933Q9H354 126 aa9.59□□□□□ -0.87
MAP1LC3B-204ENST00000563720 TMA7Q9Y2S6 64 aaKnown RBP9.59□□□□□ -0.87
MAP1LC3B-204ENST00000563720 HSBP1L1C9JCN9 74 aa9.57□□□□□ -0.88
MAP1LC3B-204ENST00000563720 S100A6P06703 90 aa9.56□□□□□ -0.88
MAP1LC3B-204ENST00000563720 NHP2Q9NX24 153 aaKnown RBP9.55□□□□□ -0.88
MAP1LC3B-204ENST00000563720 A0A0G2JQZ4 141 aa9.54□□□□□ -0.88
MAP1LC3B-204ENST00000563720 H7C2G1 150 aa9.54□□□□□ -0.88
MAP1LC3B-204ENST00000563720 Q5XG85 94 aa9.52□□□□□ -0.89
MAP1LC3B-204ENST00000563720 SCGB1D1O95968 90 aa9.5□□□□□ -0.89
MAP1LC3B-204ENST00000563720 VAMP3Q15836 100 aa9.5□□□□□ -0.89
MAP1LC3B-204ENST00000563720 LINC00575Q6W349 94 aa9.5□□□□□ -0.89
MAP1LC3B-204ENST00000563720 C9orf92A6NGG3 77 aa9.49□□□□□ -0.89
MAP1LC3B-204ENST00000563720 C1orf195Q5TG92 126 aa9.47□□□□□ -0.89
MAP1LC3B-204ENST00000563720 COX8AP10176 69 aa9.46□□□□□ -0.9
MAP1LC3B-204ENST00000563720 C12orf57Q99622 126 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms