RNA–Protein interactions for RNA: ENST00000563645.1

GDE1-202, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 2

Gene GDE1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-202ENST00000563645 A0A1W2PNN7 141 aa1.99□□□□□ -2.09
GDE1-202ENST00000563645 ANGP03950 147 aaKnown RBP1.99□□□□□ -2.09
GDE1-202ENST00000563645 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
GDE1-202ENST00000563645 WFDC13Q8IUB5 93 aa1.99□□□□□ -2.09
GDE1-202ENST00000563645 PRO2289Q9P1D8 64 aa1.99□□□□□ -2.09
GDE1-202ENST00000563645 TECTAO75443 2155 aa1.99□□□□□ -2.09
GDE1-202ENST00000563645 IGLV6-57P01721 117 aa1.98□□□□□ -2.09
GDE1-202ENST00000563645 ACYP2P14621 99 aa1.98□□□□□ -2.09
GDE1-202ENST00000563645 RPL37AP61513 92 aaKnown RBP1.98□□□□□ -2.09
GDE1-202ENST00000563645 LY6EQ16553 131 aa1.98□□□□□ -2.09
GDE1-202ENST00000563645 DEFB116Q30KQ4 102 aa1.98□□□□□ -2.09
GDE1-202ENST00000563645 PCOTHQ58A44 107 aa1.98□□□□□ -2.09
GDE1-202ENST00000563645 A0A0G2JQZ4 141 aa1.97□□□□□ -2.09
GDE1-202ENST00000563645 TPRXLQ17RH7 258 aa1.97□□□□□ -2.09
GDE1-202ENST00000563645 IGFL1Q6UW32 110 aa1.97□□□□□ -2.09
GDE1-202ENST00000563645 SSBP3-AS1Q7Z2R9 100 aa1.97□□□□□ -2.09
GDE1-202ENST00000563645 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
GDE1-202ENST00000563645 IGKV2-24A0A0C4DH68 120 aa1.96□□□□□ -2.1
GDE1-202ENST00000563645 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
GDE1-202ENST00000563645 LY6G6CO95867 125 aa1.96□□□□□ -2.1
GDE1-202ENST00000563645 C4orf3Q8WVX3 66 aa1.96□□□□□ -2.1
GDE1-202ENST00000563645 TOMM7Q9P0U1 55 aa1.96□□□□□ -2.1
GDE1-202ENST00000563645 ASCC3Q8N3C0 2202 aaKnown RBP1.95□□□□□ -2.1
GDE1-202ENST00000563645 A8MTW9 85 aa1.95□□□□□ -2.1
GDE1-202ENST00000563645 LYNX1G3V0Z9 82 aa1.95□□□□□ -2.1
GDE1-202ENST00000563645 KLK9Q2XQG4 91 aa1.95□□□□□ -2.1
GDE1-202ENST00000563645 WFDC10BQ8IUB3 73 aa1.95□□□□□ -2.1
GDE1-202ENST00000563645 TP53AIP1Q9HCN2 124 aa1.95□□□□□ -2.1
GDE1-202ENST00000563645 CRIPTQ9P021 101 aa1.95□□□□□ -2.1
GDE1-202ENST00000563645 CUL9Q8IWT3 2517 aa1.95□□□□□ -2.1
GDE1-202ENST00000563645 KMT2BQ9UMN6 2715 aaPredicted RBP1.95□□□□□ -2.1
GDE1-202ENST00000563645 G3V318 75 aa1.94□□□□□ -2.1
GDE1-202ENST00000563645 APELAP0DMC3 54 aa1.94□□□□□ -2.1
GDE1-202ENST00000563645 KAAG1Q9UBP8 84 aa1.94□□□□□ -2.1
GDE1-202ENST00000563645 CCL26Q9Y258 94 aa1.94□□□□□ -2.1
GDE1-202ENST00000563645 DOPEY2Q9Y3R5 2298 aa1.94□□□□□ -2.1
GDE1-202ENST00000563645 CNTRLQ7Z7A1 2325 aa1.93□□□□□ -2.1
GDE1-202ENST00000563645 PLCE1Q9P212 2302 aa1.93□□□□□ -2.1
GDE1-202ENST00000563645 PSORS1C2Q9UIG4 136 aa1.93□□□□□ -2.1
GDE1-202ENST00000563645 SPTY2D1-AS1A0A0U1RR47 76 aa1.92□□□□□ -2.1
GDE1-202ENST00000563645 DEFB110Q30KQ9 67 aa1.92□□□□□ -2.1
GDE1-202ENST00000563645 MINOS1Q5TGZ0 78 aa1.92□□□□□ -2.1
GDE1-202ENST00000563645 SPACA4Q8TDM5 124 aa1.92□□□□□ -2.1
GDE1-202ENST00000563645 C6orf48Q9UBA6 75 aa1.92□□□□□ -2.1
GDE1-202ENST00000563645 R4GN34 69 aa1.92□□□□□ -2.1
GDE1-202ENST00000563645 ASXL3Q9C0F0 2248 aa1.92□□□□□ -2.1
GDE1-202ENST00000563645 AHCTF1Q8WYP5 2266 aa1.92□□□□□ -2.1
GDE1-202ENST00000563645 MMP24-AS1A0A0U1RRL7 71 aa1.91□□□□□ -2.1
GDE1-202ENST00000563645 H0YAA0 97 aa1.91□□□□□ -2.1
GDE1-202ENST00000563645 HIVEP2P31629 2446 aa1.91□□□□□ -2.1
GDE1-202ENST00000563645 NAV3Q8IVL0 2385 aa1.91□□□□□ -2.1
GDE1-202ENST00000563645 Q6ZRX8 168 aa1.9□□□□□ -2.11
GDE1-202ENST00000563645 TRIOBPQ9H2D6 2365 aa1.9□□□□□ -2.11
GDE1-202ENST00000563645 DEFB1P60022 68 aa1.89□□□□□ -2.11
GDE1-202ENST00000563645 KNL1Q8NG31 2342 aa1.89□□□□□ -2.11
GDE1-202ENST00000563645 CLPSL2Q6UWE3 100 aa1.88□□□□□ -2.11
GDE1-202ENST00000563645 Q6ZSA8 131 aa1.88□□□□□ -2.11
GDE1-202ENST00000563645 BRWD1Q9NSI6 2320 aa1.87□□□□□ -2.11
GDE1-202ENST00000563645 GVQW2A0A096LPI5 108 aaPredicted RBP1.86□□□□□ -2.11
GDE1-202ENST00000563645 DEFB131AP59861 70 aa1.86□□□□□ -2.11
GDE1-202ENST00000563645 PLAC4Q8WY50 150 aa1.86□□□□□ -2.11
GDE1-202ENST00000563645 MRPL34Q9BQ48 92 aaKnown RBP1.85□□□□□ -2.11
GDE1-202ENST00000563645 ABCA1O95477 2261 aa1.85□□□□□ -2.11
GDE1-202ENST00000563645 INE1O15225 51 aa1.84□□□□□ -2.11
GDE1-202ENST00000563645 KRTAP13-2Q52LG2 175 aa1.84□□□□□ -2.11
GDE1-202ENST00000563645 DEFB105AQ8NG35 78 aa1.84□□□□□ -2.11
GDE1-202ENST00000563645 C10orf95Q9H7T3 257 aa1.84□□□□□ -2.11
GDE1-202ENST00000563645 H1FX-AS1Q4G0G2 97 aa1.83□□□□□ -2.12
GDE1-202ENST00000563645 LELP1Q5T871 98 aa1.83□□□□□ -2.12
GDE1-202ENST00000563645 ICE1Q9Y2F5 2266 aa1.83□□□□□ -2.12
GDE1-202ENST00000563645 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.83□□□□□ -2.12
GDE1-202ENST00000563645 CD52P31358 61 aa1.82□□□□□ -2.12
GDE1-202ENST00000563645 Q6ZRN7 208 aaPredicted RBP1.82□□□□□ -2.12
GDE1-202ENST00000563645 DEFB108BQ8NET1 73 aa1.82□□□□□ -2.12
GDE1-202ENST00000563645 ANKRD17O75179 2603 aaKnown RBP1.82□□□□□ -2.12
GDE1-202ENST00000563645 CNOT1A5YKK6 2376 aaKnown RBP1.81□□□□□ -2.12
GDE1-202ENST00000563645 SPINK13Q1W4C9 94 aa1.81□□□□□ -2.12
GDE1-202ENST00000563645 UNQ6190/PRO20217Q6UXQ8 127 aa1.81□□□□□ -2.12
GDE1-202ENST00000563645 DEFB130BP0DP73 79 aa1.8□□□□□ -2.12
GDE1-202ENST00000563645 DEFB130AP0DP74 79 aa1.8□□□□□ -2.12
GDE1-202ENST00000563645 SPRR1AP35321 89 aa1.8□□□□□ -2.12
GDE1-202ENST00000563645 DEFB109BQ30KR1 87 aa1.8□□□□□ -2.12
GDE1-202ENST00000563645 COX6B2Q6YFQ2 88 aa1.8□□□□□ -2.12
GDE1-202ENST00000563645 A0A0C4DFX4 3053 aa1.8□□□□□ -2.12
GDE1-202ENST00000563645 COL6A6A6NMZ7 2263 aa1.79□□□□□ -2.12
GDE1-202ENST00000563645 K7EIL1 84 aa1.79□□□□□ -2.12
GDE1-202ENST00000563645 LYNX1P0DP58 116 aa1.79□□□□□ -2.12
GDE1-202ENST00000563645 KRTAP13-1Q8IUC0 172 aa1.79□□□□□ -2.12
GDE1-202ENST00000563645 RHPN1-AS1Q9BWJ2 59 aa1.79□□□□□ -2.12
GDE1-202ENST00000563645 FLG2Q5D862 2391 aaPredicted RBP1.78□□□□□ -2.12
GDE1-202ENST00000563645 GPR179Q6PRD1 2367 aa1.78□□□□□ -2.12
GDE1-202ENST00000563645 WNK2Q9Y3S1 2297 aa1.78□□□□□ -2.13
GDE1-202ENST00000563645 RPL37P61927 97 aaKnown RBP1.77□□□□□ -2.13
GDE1-202ENST00000563645 C10orf99Q6UWK7 81 aa1.77□□□□□ -2.13
GDE1-202ENST00000563645 ZFHX2Q9C0A1 2572 aaPredicted RBP1.76□□□□□ -2.13
GDE1-202ENST00000563645 CACNA1EQ15878 2313 aa1.76□□□□□ -2.13
GDE1-202ENST00000563645 USMG5Q96IX5 58 aa1.75□□□□□ -2.13
GDE1-202ENST00000563645 Q9Y3F1 56 aa1.75□□□□□ -2.13
GDE1-202ENST00000563645 H3BUA1 57 aa1.74□□□□□ -2.13
GDE1-202ENST00000563645 HTN1P15515 57 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms