RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 BOD1L2Q8IYS8 172 aa9.61□□□□□ -0.87
HDGFL3-203ENST00000563404 TTTY13Q9BZ97 58 aa9.61□□□□□ -0.87
HDGFL3-203ENST00000563404 SMIM6P0DI80 62 aa9.6□□□□□ -0.87
HDGFL3-203ENST00000563404 S100A12P80511 92 aa9.6□□□□□ -0.87
HDGFL3-203ENST00000563404 PPDPFQ9H3Y8 114 aa9.6□□□□□ -0.87
HDGFL3-203ENST00000563404 PAM16Q9Y3D7 125 aa9.6□□□□□ -0.87
HDGFL3-203ENST00000563404 RPL24P83731 157 aaKnown RBP9.59□□□□□ -0.87
HDGFL3-203ENST00000563404 SCGB1D4Q6XE38 83 aa9.59□□□□□ -0.87
HDGFL3-203ENST00000563404 MIR7-3HGQ8N6C7 128 aa9.59□□□□□ -0.87
HDGFL3-203ENST00000563404 LITAFQ99732 161 aa9.59□□□□□ -0.87
HDGFL3-203ENST00000563404 ADAMTSL4-AS1Q5T5F5 129 aa9.57□□□□□ -0.88
HDGFL3-203ENST00000563404 COPS9Q8WXC6 57 aa9.57□□□□□ -0.88
HDGFL3-203ENST00000563404 HIGD2AQ9BW72 106 aa9.57□□□□□ -0.88
HDGFL3-203ENST00000563404 A0A0U1RRA0 63 aa9.56□□□□□ -0.88
HDGFL3-203ENST00000563404 SLC25A34Q6PIV7 304 aa9.56□□□□□ -0.88
HDGFL3-203ENST00000563404 SPRR4Q96PI1 79 aa9.56□□□□□ -0.88
HDGFL3-203ENST00000563404 SPANXDQ9BXN6 97 aa9.56□□□□□ -0.88
HDGFL3-203ENST00000563404 SPANXCQ9NY87 97 aa9.56□□□□□ -0.88
HDGFL3-203ENST00000563404 IFITM1P13164 125 aa9.55□□□□□ -0.88
HDGFL3-203ENST00000563404 SPANXB1Q9NS25 103 aaPredicted RBP9.55□□□□□ -0.88
HDGFL3-203ENST00000563404 C14orf144Q96I85 54 aa9.54□□□□□ -0.88
HDGFL3-203ENST00000563404 HIGD1BQ9P298 99 aa9.54□□□□□ -0.88
HDGFL3-203ENST00000563404 NDUFC2O95298 119 aa9.53□□□□□ -0.88
HDGFL3-203ENST00000563404 SPAG11AQ6PDA7 123 aa9.53□□□□□ -0.88
HDGFL3-203ENST00000563404 MIEN1Q9BRT3 115 aa9.53□□□□□ -0.88
HDGFL3-203ENST00000563404 DAND5Q8N907 189 aa9.52□□□□□ -0.89
HDGFL3-203ENST00000563404 LINC00308Q8TCZ7 52 aa9.52□□□□□ -0.89
HDGFL3-203ENST00000563404 KRTAP13-3Q3SY46 172 aa9.5□□□□□ -0.89
HDGFL3-203ENST00000563404 FP248Q71RG6 208 aaPredicted RBP9.5□□□□□ -0.89
HDGFL3-203ENST00000563404 TRBV10-2A0A0K0K1G8 114 aa9.49□□□□□ -0.89
HDGFL3-203ENST00000563404 SOSTDC1Q6X4U4 206 aa9.49□□□□□ -0.89
HDGFL3-203ENST00000563404 Q8NBF4 154 aa9.49□□□□□ -0.89
HDGFL3-203ENST00000563404 UQCR10Q9UDW1 63 aa9.49□□□□□ -0.89
HDGFL3-203ENST00000563404 KRTAP4-1Q9BYQ7 146 aa9.48□□□□□ -0.89
HDGFL3-203ENST00000563404 SPRR1AP35321 89 aa9.47□□□□□ -0.89
HDGFL3-203ENST00000563404 LINC00518Q8N0U6 118 aa9.47□□□□□ -0.89
HDGFL3-203ENST00000563404 KRTAP4-16G5E9R7 235 aaPredicted RBP9.46□□□□□ -0.9
HDGFL3-203ENST00000563404 PRYO14603 147 aa9.46□□□□□ -0.9
HDGFL3-203ENST00000563404 EIF4EBP3O60516 100 aaPredicted RBP9.46□□□□□ -0.9
HDGFL3-203ENST00000563404 TAL2Q16559 108 aa9.46□□□□□ -0.9
HDGFL3-203ENST00000563404 ASB16-AS1Q495Z4 193 aa9.46□□□□□ -0.9
HDGFL3-203ENST00000563404 C4orf48Q5BLP8 95 aa9.46□□□□□ -0.9
HDGFL3-203ENST00000563404 C2orf91Q6ZV80 131 aa9.46□□□□□ -0.9
HDGFL3-203ENST00000563404 MUSTN1Q8IVN3 82 aa9.46□□□□□ -0.9
HDGFL3-203ENST00000563404 SMCR5Q8TEV8 140 aa9.46□□□□□ -0.9
HDGFL3-203ENST00000563404 C12orf57Q99622 126 aa9.46□□□□□ -0.9
HDGFL3-203ENST00000563404 ZNF706Q9Y5V0 76 aaPredicted RBP9.46□□□□□ -0.9
HDGFL3-203ENST00000563404 NCR3O14931 201 aa9.45□□□□□ -0.9
HDGFL3-203ENST00000563404 LINC00337Q8N6G1 96 aa9.45□□□□□ -0.9
HDGFL3-203ENST00000563404 HIST1H4GQ99525 98 aa9.45□□□□□ -0.9
HDGFL3-203ENST00000563404 KCNQ1DNQ9H478 68 aa9.45□□□□□ -0.9
HDGFL3-203ENST00000563404 NPC2P61916 151 aa9.42□□□□□ -0.9
HDGFL3-203ENST00000563404 LINC00483Q53H64 154 aa9.42□□□□□ -0.9
HDGFL3-203ENST00000563404 CBY1Q9Y3M2 126 aa9.42□□□□□ -0.9
HDGFL3-203ENST00000563404 SPINK1P00995 79 aa9.41□□□□□ -0.9
HDGFL3-203ENST00000563404 TRBV10-3A0A0K0K1G6 114 aa9.4□□□□□ -0.9
HDGFL3-203ENST00000563404 IGLV6-57P01721 117 aa9.4□□□□□ -0.9
HDGFL3-203ENST00000563404 ETDCA0A1B0GVM5 59 aa9.39□□□□□ -0.91
HDGFL3-203ENST00000563404 TSTD3H0UI37 97 aa9.39□□□□□ -0.91
HDGFL3-203ENST00000563404 ERC2-IT1O76042 136 aa9.39□□□□□ -0.91
HDGFL3-203ENST00000563404 HSD52Q0P140 79 aa9.38□□□□□ -0.91
HDGFL3-203ENST00000563404 GAGE2AQ6NT46 116 aa9.38□□□□□ -0.91
HDGFL3-203ENST00000563404 CEND1Q8N111 149 aa9.38□□□□□ -0.91
HDGFL3-203ENST00000563404 TRAV13-2A0A0B4J235 113 aa9.37□□□□□ -0.91
HDGFL3-203ENST00000563404 A4D1N5 150 aa9.37□□□□□ -0.91
HDGFL3-203ENST00000563404 B5MCH6 92 aa9.37□□□□□ -0.91
HDGFL3-203ENST00000563404 DDTP30046 118 aa9.37□□□□□ -0.91
HDGFL3-203ENST00000563404 S100A7L2Q5SY68 101 aa9.37□□□□□ -0.91
HDGFL3-203ENST00000563404 Q8N377 158 aa9.37□□□□□ -0.91
HDGFL3-203ENST00000563404 PRO1933Q9H354 126 aa9.37□□□□□ -0.91
HDGFL3-203ENST00000563404 IGLV9-49A0A0B4J1Y8 123 aa9.36□□□□□ -0.91
HDGFL3-203ENST00000563404 TMEM238LA0A1B0GVL6 79 aa9.36□□□□□ -0.91
HDGFL3-203ENST00000563404 A6NJY4 79 aa9.36□□□□□ -0.91
HDGFL3-203ENST00000563404 LINC01547P58512 204 aaPredicted RBP9.36□□□□□ -0.91
HDGFL3-203ENST00000563404 MOBPQ13875 183 aa9.36□□□□□ -0.91
HDGFL3-203ENST00000563404 SEC61BP60468 96 aaKnown RBP9.35□□□□□ -0.91
HDGFL3-203ENST00000563404 Q9BRP9 147 aa9.35□□□□□ -0.91
HDGFL3-203ENST00000563404 LCE2DQ5TA82 110 aaPredicted RBP9.34□□□□□ -0.91
HDGFL3-203ENST00000563404 FSIP2Q5CZC0 6907 aa9.33□□□□□ -0.92
HDGFL3-203ENST00000563404 RPS29P62273 56 aaKnown RBP9.33□□□□□ -0.92
HDGFL3-203ENST00000563404 SSBP3-AS1Q7Z2R9 100 aa9.33□□□□□ -0.92
HDGFL3-203ENST00000563404 OR13C6PQ8NH95 151 aa9.33□□□□□ -0.92
HDGFL3-203ENST00000563404 A0A0B4J2C4 111 aa9.31□□□□□ -0.92
HDGFL3-203ENST00000563404 A6NDN8 102 aa9.31□□□□□ -0.92
HDGFL3-203ENST00000563404 CFC1BP0CG36 223 aa9.31□□□□□ -0.92
HDGFL3-203ENST00000563404 CFC1P0CG37 223 aa9.31□□□□□ -0.92
HDGFL3-203ENST00000563404 TRAV23DV6A0A075B6W5 121 aa9.3□□□□□ -0.92
HDGFL3-203ENST00000563404 XP32Q5T750 250 aa9.3□□□□□ -0.92
HDGFL3-203ENST00000563404 FXYD2P54710 66 aa9.29□□□□□ -0.92
HDGFL3-203ENST00000563404 Q6ZRX8 168 aa9.29□□□□□ -0.92
HDGFL3-203ENST00000563404 TRBV7-6A0A0J9YX20 115 aa9.28□□□□□ -0.92
HDGFL3-203ENST00000563404 M0R143 59 aa9.28□□□□□ -0.92
HDGFL3-203ENST00000563404 SLC25A20O43772 301 aa9.28□□□□□ -0.92
HDGFL3-203ENST00000563404 ZNF73O43830 326 aaPredicted RBP9.28□□□□□ -0.92
HDGFL3-203ENST00000563404 HINT1P49773 126 aaPredicted RBP9.28□□□□□ -0.92
HDGFL3-203ENST00000563404 LCE2CQ5TA81 110 aa9.28□□□□□ -0.92
HDGFL3-203ENST00000563404 A0A1B0GWB2 263 aa9.27□□□□□ -0.93
HDGFL3-203ENST00000563404 BVES-AS1Q5T3Y7 98 aa9.27□□□□□ -0.93
HDGFL3-203ENST00000563404 RAB37Q96AX2 223 aa9.27□□□□□ -0.93
HDGFL3-203ENST00000563404 PRO1854Q9UHT4 67 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms