RNA–Protein interactions for RNA: ENST00000563109.1

RAB40C-207, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 710 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-207ENST00000563109 A6NJY4 79 aa11.52□□□□□ -0.57
RAB40C-207ENST00000563109 SPINK6Q6UWN8 80 aa11.52□□□□□ -0.57
RAB40C-207ENST00000563109 CEND1Q8N111 149 aa11.52□□□□□ -0.57
RAB40C-207ENST00000563109 TSTD3H0UI37 97 aa11.51□□□□□ -0.57
RAB40C-207ENST00000563109 ZNF861PO60384 105 aa11.5□□□□□ -0.57
RAB40C-207ENST00000563109 SPRR1AP35321 89 aa11.5□□□□□ -0.57
RAB40C-207ENST00000563109 ZNF73O43830 326 aaPredicted RBP11.49□□□□□ -0.57
RAB40C-207ENST00000563109 DIRC1Q969H9 104 aa11.49□□□□□ -0.57
RAB40C-207ENST00000563109 HINT1P49773 126 aaPredicted RBP11.48□□□□□ -0.57
RAB40C-207ENST00000563109 PRLHP81277 87 aa11.48□□□□□ -0.57
RAB40C-207ENST00000563109 RAB37Q96AX2 223 aa11.47□□□□□ -0.57
RAB40C-207ENST00000563109 SRRM2Q9UQ35 2752 aaKnown RBP11.46□□□□□ -0.57
RAB40C-207ENST00000563109 KRTAP13-1Q8IUC0 172 aa11.46□□□□□ -0.57
RAB40C-207ENST00000563109 PKHD1L1Q86WI1 4243 aa11.46□□□□□ -0.58
RAB40C-207ENST00000563109 H0Y9J4 135 aa11.45□□□□□ -0.58
RAB40C-207ENST00000563109 RPL13AP40429 203 aaKnown RBP11.45□□□□□ -0.58
RAB40C-207ENST00000563109 A0A0B4J2C4 111 aa11.44□□□□□ -0.58
RAB40C-207ENST00000563109 KRTAP4-16G5E9R7 235 aaPredicted RBP11.44□□□□□ -0.58
RAB40C-207ENST00000563109 FXYD2P54710 66 aa11.44□□□□□ -0.58
RAB40C-207ENST00000563109 B5MCH6 92 aa11.43□□□□□ -0.58
RAB40C-207ENST00000563109 CFC1BP0CG36 223 aa11.43□□□□□ -0.58
RAB40C-207ENST00000563109 CFC1P0CG37 223 aa11.43□□□□□ -0.58
RAB40C-207ENST00000563109 C6orf99Q4VX62 202 aa11.42□□□□□ -0.58
RAB40C-207ENST00000563109 Q6ZRX8 168 aa11.42□□□□□ -0.58
RAB40C-207ENST00000563109 HIGD2AQ9BW72 106 aa11.42□□□□□ -0.58
RAB40C-207ENST00000563109 ABCA13Q86UQ4 5058 aa11.41□□□□□ -0.58
RAB40C-207ENST00000563109 SMIM11BQ8TCY0 68 aa11.41□□□□□ -0.58
RAB40C-207ENST00000563109 M0R143 59 aa11.39□□□□□ -0.59
RAB40C-207ENST00000563109 COX7BP24311 80 aa11.39□□□□□ -0.59
RAB40C-207ENST00000563109 CTAG1AP78358 180 aa11.39□□□□□ -0.59
RAB40C-207ENST00000563109 NHP2Q9NX24 153 aaKnown RBP11.39□□□□□ -0.59
RAB40C-207ENST00000563109 TRBV7-6A0A0J9YX20 115 aa11.38□□□□□ -0.59
RAB40C-207ENST00000563109 H7C2G1 150 aa11.38□□□□□ -0.59
RAB40C-207ENST00000563109 A0A1B0GWB2 263 aa11.37□□□□□ -0.59
RAB40C-207ENST00000563109 ELOF1P60002 83 aaKnown RBP11.37□□□□□ -0.59
RAB40C-207ENST00000563109 Q1RN00 199 aa11.37□□□□□ -0.59
RAB40C-207ENST00000563109 PRO1854Q9UHT4 67 aa11.37□□□□□ -0.59
RAB40C-207ENST00000563109 VAMP3Q15836 100 aa11.36□□□□□ -0.59
RAB40C-207ENST00000563109 BVES-AS1Q5T3Y7 98 aa11.36□□□□□ -0.59
RAB40C-207ENST00000563109 SMCR5Q8TEV8 140 aa11.35□□□□□ -0.59
RAB40C-207ENST00000563109 ZNF706Q9Y5V0 76 aaPredicted RBP11.35□□□□□ -0.59
RAB40C-207ENST00000563109 Q9BRP9 147 aa11.34□□□□□ -0.59
RAB40C-207ENST00000563109 DHRS4-AS1Q9P1J3 65 aa11.34□□□□□ -0.59
RAB40C-207ENST00000563109 OXTP01178 125 aa11.33□□□□□ -0.6
RAB40C-207ENST00000563109 K7ERJ3 54 aa11.32□□□□□ -0.6
RAB40C-207ENST00000563109 PCP4L1A6NKN8 68 aa11.31□□□□□ -0.6
RAB40C-207ENST00000563109 FLG2Q5D862 2391 aaPredicted RBP11.3□□□□□ -0.6
RAB40C-207ENST00000563109 KRTAP29-1A8MX34 341 aaPredicted RBP11.29□□□□□ -0.6
RAB40C-207ENST00000563109 PCLOQ9Y6V0 5065 aa11.28□□□□□ -0.6
RAB40C-207ENST00000563109 SLC25A20O43772 301 aa11.28□□□□□ -0.6
RAB40C-207ENST00000563109 ERC2-IT1O76042 136 aa11.28□□□□□ -0.6
RAB40C-207ENST00000563109 KRTAP1-4P0C5Y4 121 aa11.28□□□□□ -0.6
RAB40C-207ENST00000563109 LINC01600Q96MT4 127 aa11.28□□□□□ -0.6
RAB40C-207ENST00000563109 SPRR4Q96PI1 79 aa11.28□□□□□ -0.6
RAB40C-207ENST00000563109 J3QL48 77 aa11.25□□□□□ -0.61
RAB40C-207ENST00000563109 PSMB2P49721 201 aa11.25□□□□□ -0.61
RAB40C-207ENST00000563109 BATFQ16520 125 aa11.25□□□□□ -0.61
RAB40C-207ENST00000563109 TSPAN13O95857 204 aa11.24□□□□□ -0.61
RAB40C-207ENST00000563109 FAM229BQ4G0N7 80 aa11.24□□□□□ -0.61
RAB40C-207ENST00000563109 H0YGX0 51 aa11.23□□□□□ -0.61
RAB40C-207ENST00000563109 GAGE2AQ6NT46 116 aa11.23□□□□□ -0.61
RAB40C-207ENST00000563109 LINC00575Q6W349 94 aa11.23□□□□□ -0.61
RAB40C-207ENST00000563109 TRIAP1O43715 76 aa11.22□□□□□ -0.61
RAB40C-207ENST00000563109 CRYGAP11844 174 aa11.22□□□□□ -0.61
RAB40C-207ENST00000563109 ANAPC11Q9NYG5 84 aa11.22□□□□□ -0.61
RAB40C-207ENST00000563109 FAT3Q8TDW7 4589 aa11.21□□□□□ -0.61
RAB40C-207ENST00000563109 SNCGO76070 127 aa11.21□□□□□ -0.61
RAB40C-207ENST00000563109 COX6CP09669 75 aa11.21□□□□□ -0.61
RAB40C-207ENST00000563109 PRR26Q8N8Z3 221 aa11.21□□□□□ -0.61
RAB40C-207ENST00000563109 ST20-AS1Q8NBB2 130 aa11.21□□□□□ -0.61
RAB40C-207ENST00000563109 MYCBP2O75592 4640 aa11.2□□□□□ -0.62
RAB40C-207ENST00000563109 hADV29S1A0JD25 119 aa11.2□□□□□ -0.62
RAB40C-207ENST00000563109 LINC00483Q53H64 154 aa11.19□□□□□ -0.62
RAB40C-207ENST00000563109 A0A087X002 238 aa11.17□□□□□ -0.62
RAB40C-207ENST00000563109 LRP1Q07954 4544 aaKnown RBP11.16□□□□□ -0.62
RAB40C-207ENST00000563109 DEFB105AQ8NG35 78 aa11.16□□□□□ -0.62
RAB40C-207ENST00000563109 MT1HL1P0DM35 61 aa11.15□□□□□ -0.62
RAB40C-207ENST00000563109 KRTAP10-8P60410 259 aa11.15□□□□□ -0.62
RAB40C-207ENST00000563109 Q6ZQY7 126 aa11.15□□□□□ -0.62
RAB40C-207ENST00000563109 TEX49A0A1B0GTD5 131 aa11.14□□□□□ -0.63
RAB40C-207ENST00000563109 A0A1B0GX51 115 aa11.14□□□□□ -0.63
RAB40C-207ENST00000563109 SCGB1C2P0DMR2 95 aa11.14□□□□□ -0.63
RAB40C-207ENST00000563109 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.14□□□□□ -0.63
RAB40C-207ENST00000563109 TYMSOSQ8TAI1 123 aa11.14□□□□□ -0.63
RAB40C-207ENST00000563109 SPRR1BP22528 89 aa11.13□□□□□ -0.63
RAB40C-207ENST00000563109 FAM218AQ96MZ4 157 aa11.13□□□□□ -0.63
RAB40C-207ENST00000563109 IGLV5-48A0A075B6I7 105 aa11.12□□□□□ -0.63
RAB40C-207ENST00000563109 KRTAP13-2Q52LG2 175 aa11.12□□□□□ -0.63
RAB40C-207ENST00000563109 CLEC2BQ92478 149 aa11.12□□□□□ -0.63
RAB40C-207ENST00000563109 LAMTOR3Q9UHA4 124 aa11.11□□□□□ -0.63
RAB40C-207ENST00000563109 IGLV9-49A0A0B4J1Y8 123 aa11.1□□□□□ -0.63
RAB40C-207ENST00000563109 C3orf22Q8N5N4 141 aa11.1□□□□□ -0.63
RAB40C-207ENST00000563109 DNAL4O96015 105 aa11.09□□□□□ -0.63
RAB40C-207ENST00000563109 SNHG12Q9BXW3 62 aa11.09□□□□□ -0.63
RAB40C-207ENST00000563109 LINC01547P58512 204 aaPredicted RBP11.08□□□□□ -0.64
RAB40C-207ENST00000563109 OCIAD2Q56VL3 154 aa11.08□□□□□ -0.64
RAB40C-207ENST00000563109 C9orf153Q5TBE3 101 aa11.08□□□□□ -0.64
RAB40C-207ENST00000563109 LYRM7Q5U5X0 104 aa11.08□□□□□ -0.64
RAB40C-207ENST00000563109 NAA38Q9BRA0 125 aaKnown RBP11.08□□□□□ -0.64
RAB40C-207ENST00000563109 GHRHP01286 108 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 493 ms