RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 LINC00308Q8TCZ7 52 aa6.36□□□□□ -1.39
LPCAT4-202ENST00000562404 ZNF815PA8K554 130 aa6.35□□□□□ -1.39
LPCAT4-202ENST00000562404 ANKRD39Q53RE8 183 aa6.35□□□□□ -1.39
LPCAT4-202ENST00000562404 S100A7L2Q5SY68 101 aa6.35□□□□□ -1.39
LPCAT4-202ENST00000562404 GAGE2AQ6NT46 116 aa6.35□□□□□ -1.39
LPCAT4-202ENST00000562404 Q6ZRX8 168 aa6.35□□□□□ -1.39
LPCAT4-202ENST00000562404 ZNF706Q9Y5V0 76 aaPredicted RBP6.35□□□□□ -1.39
LPCAT4-202ENST00000562404 TRAV23DV6A0A075B6W5 121 aa6.34□□□□□ -1.39
LPCAT4-202ENST00000562404 ATOH7Q8N100 152 aa6.34□□□□□ -1.39
LPCAT4-202ENST00000562404 Q8NBF4 154 aa6.34□□□□□ -1.39
LPCAT4-202ENST00000562404 TIMM17BO60830 172 aa6.33□□□□□ -1.4
LPCAT4-202ENST00000562404 ZNF73O43830 326 aaPredicted RBP6.32□□□□□ -1.4
LPCAT4-202ENST00000562404 S100A12P80511 92 aa6.32□□□□□ -1.4
LPCAT4-202ENST00000562404 ST20-AS1Q8NBB2 130 aa6.32□□□□□ -1.4
LPCAT4-202ENST00000562404 SPANXCQ9NY87 97 aa6.32□□□□□ -1.4
LPCAT4-202ENST00000562404 IGLV9-49A0A0B4J1Y8 123 aa6.3□□□□□ -1.4
LPCAT4-202ENST00000562404 CTAG1AP78358 180 aa6.3□□□□□ -1.4
LPCAT4-202ENST00000562404 MOBPQ13875 183 aa6.3□□□□□ -1.4
LPCAT4-202ENST00000562404 PCP2Q8IVA1 136 aa6.3□□□□□ -1.4
LPCAT4-202ENST00000562404 IGLV7-46A0A075B6I9 117 aa6.29□□□□□ -1.4
LPCAT4-202ENST00000562404 SPAG11AQ6PDA7 123 aa6.29□□□□□ -1.4
LPCAT4-202ENST00000562404 OR13C6PQ8NH95 151 aa6.29□□□□□ -1.4
LPCAT4-202ENST00000562404 TPRXLQ17RH7 258 aa6.28□□□□□ -1.4
LPCAT4-202ENST00000562404 HIST3H2BBQ8N257 126 aa6.28□□□□□ -1.4
LPCAT4-202ENST00000562404 SPANXDQ9BXN6 97 aa6.28□□□□□ -1.4
LPCAT4-202ENST00000562404 C20orf202A1L168 122 aa6.26□□□□□ -1.41
LPCAT4-202ENST00000562404 JOSD1Q15040 202 aaPredicted RBP6.26□□□□□ -1.41
LPCAT4-202ENST00000562404 C4orf48Q5BLP8 95 aa6.26□□□□□ -1.41
LPCAT4-202ENST00000562404 SCGB1D4Q6XE38 83 aa6.26□□□□□ -1.41
LPCAT4-202ENST00000562404 HIST1H2BLQ99880 126 aa6.26□□□□□ -1.41
LPCAT4-202ENST00000562404 SPINK1P00995 79 aa6.25□□□□□ -1.41
LPCAT4-202ENST00000562404 C6orf99Q4VX62 202 aa6.25□□□□□ -1.41
LPCAT4-202ENST00000562404 SSBP3-AS1Q7Z2R9 100 aa6.25□□□□□ -1.41
LPCAT4-202ENST00000562404 MUSTN1Q8IVN3 82 aa6.25□□□□□ -1.41
LPCAT4-202ENST00000562404 ELOF1P60002 83 aaKnown RBP6.24□□□□□ -1.41
LPCAT4-202ENST00000562404 LINC00518Q8N0U6 118 aa6.24□□□□□ -1.41
LPCAT4-202ENST00000562404 Q8N377 158 aa6.24□□□□□ -1.41
LPCAT4-202ENST00000562404 CDIP1Q9H305 208 aa6.24□□□□□ -1.41
LPCAT4-202ENST00000562404 FAT4Q6V0I7 4981 aa6.24□□□□□ -1.41
LPCAT4-202ENST00000562404 SPRR1BP22528 89 aa6.23□□□□□ -1.41
LPCAT4-202ENST00000562404 C9orf153Q5TBE3 101 aa6.23□□□□□ -1.41
LPCAT4-202ENST00000562404 IFITM1P13164 125 aa6.22□□□□□ -1.41
LPCAT4-202ENST00000562404 S100A1P23297 94 aa6.22□□□□□ -1.41
LPCAT4-202ENST00000562404 COX7BP24311 80 aa6.22□□□□□ -1.41
LPCAT4-202ENST00000562404 HINT1P49773 126 aaPredicted RBP6.22□□□□□ -1.41
LPCAT4-202ENST00000562404 KRTAP13-3Q3SY46 172 aa6.22□□□□□ -1.41
LPCAT4-202ENST00000562404 FP248Q71RG6 208 aaPredicted RBP6.22□□□□□ -1.41
LPCAT4-202ENST00000562404 DHRS4-AS1Q9P1J3 65 aa6.21□□□□□ -1.42
LPCAT4-202ENST00000562404 CBY1Q9Y3M2 126 aa6.21□□□□□ -1.42
LPCAT4-202ENST00000562404 C5orf52A6NGY3 159 aa6.2□□□□□ -1.42
LPCAT4-202ENST00000562404 S100A2P29034 98 aa6.2□□□□□ -1.42
LPCAT4-202ENST00000562404 RPS29P62273 56 aaKnown RBP6.2□□□□□ -1.42
LPCAT4-202ENST00000562404 Q6ZVH6 145 aa6.2□□□□□ -1.42
LPCAT4-202ENST00000562404 A6NDN8 102 aa6.19□□□□□ -1.42
LPCAT4-202ENST00000562404 LINC01547P58512 204 aaPredicted RBP6.19□□□□□ -1.42
LPCAT4-202ENST00000562404 SNRPEP62304 92 aaKnown RBP6.19□□□□□ -1.42
LPCAT4-202ENST00000562404 AKR1D1P51857 326 aa6.18□□□□□ -1.42
LPCAT4-202ENST00000562404 SMIM29Q86T20 159 aa6.18□□□□□ -1.42
LPCAT4-202ENST00000562404 DEFB105AQ8NG35 78 aa6.18□□□□□ -1.42
LPCAT4-202ENST00000562404 SMIM11BQ8TCY0 68 aa6.18□□□□□ -1.42
LPCAT4-202ENST00000562404 TRBV7-6A0A0J9YX20 115 aa6.17□□□□□ -1.42
LPCAT4-202ENST00000562404 Q1RN00 199 aa6.17□□□□□ -1.42
LPCAT4-202ENST00000562404 HRCT1Q6UXD1 115 aa6.17□□□□□ -1.42
LPCAT4-202ENST00000562404 A0A0G2JQZ4 141 aa6.16□□□□□ -1.42
LPCAT4-202ENST00000562404 A0A1B0GWB2 263 aa6.16□□□□□ -1.42
LPCAT4-202ENST00000562404 SLC25A20O43772 301 aa6.16□□□□□ -1.42
LPCAT4-202ENST00000562404 S100A6P06703 90 aa6.16□□□□□ -1.42
LPCAT4-202ENST00000562404 TAL2Q16559 108 aa6.16□□□□□ -1.42
LPCAT4-202ENST00000562404 COPS9Q8WXC6 57 aa6.16□□□□□ -1.42
LPCAT4-202ENST00000562404 KRTAP4-1Q9BYQ7 146 aa6.16□□□□□ -1.42
LPCAT4-202ENST00000562404 LAMTOR3Q9UHA4 124 aa6.15□□□□□ -1.42
LPCAT4-202ENST00000562404 IGLV5-48A0A075B6I7 105 aa6.14□□□□□ -1.43
LPCAT4-202ENST00000562404 TRAV13-2A0A0B4J235 113 aa6.14□□□□□ -1.43
LPCAT4-202ENST00000562404 TEX49A0A1B0GTD5 131 aa6.14□□□□□ -1.43
LPCAT4-202ENST00000562404 A4D1N5 150 aa6.14□□□□□ -1.43
LPCAT4-202ENST00000562404 LCE2AQ5TA79 106 aaPredicted RBP6.14□□□□□ -1.43
LPCAT4-202ENST00000562404 HSBP1L1C9JCN9 74 aa6.13□□□□□ -1.43
LPCAT4-202ENST00000562404 SCGB1D1O95968 90 aa6.13□□□□□ -1.43
LPCAT4-202ENST00000562404 SLC25A34Q6PIV7 304 aa6.13□□□□□ -1.43
LPCAT4-202ENST00000562404 ASB16-AS1Q495Z4 193 aa6.12□□□□□ -1.43
LPCAT4-202ENST00000562404 XP32Q5T750 250 aa6.11□□□□□ -1.43
LPCAT4-202ENST00000562404 C12orf57Q99622 126 aa6.11□□□□□ -1.43
LPCAT4-202ENST00000562404 H7C2G1 150 aa6.1□□□□□ -1.43
LPCAT4-202ENST00000562404 COX8AP10176 69 aa6.1□□□□□ -1.43
LPCAT4-202ENST00000562404 A0A0U1RQV1 116 aa6.09□□□□□ -1.43
LPCAT4-202ENST00000562404 LINC00575Q6W349 94 aa6.09□□□□□ -1.43
LPCAT4-202ENST00000562404 PRO1933Q9H354 126 aa6.09□□□□□ -1.43
LPCAT4-202ENST00000562404 CD164Q04900 197 aa6.08□□□□□ -1.44
LPCAT4-202ENST00000562404 C14orf144Q96I85 54 aa6.08□□□□□ -1.44
LPCAT4-202ENST00000562404 LIMD2Q9BT23 127 aa6.08□□□□□ -1.44
LPCAT4-202ENST00000562404 HIST1H4GQ99525 98 aa6.07□□□□□ -1.44
LPCAT4-202ENST00000562404 KRTAP3-3Q9BYR6 98 aa6.07□□□□□ -1.44
LPCAT4-202ENST00000562404 KRTAP3-2Q9BYR7 98 aa6.07□□□□□ -1.44
LPCAT4-202ENST00000562404 C9orf92A6NGG3 77 aa6.06□□□□□ -1.44
LPCAT4-202ENST00000562404 DLEU1O43261 78 aa6.06□□□□□ -1.44
LPCAT4-202ENST00000562404 Q6ZQY7 126 aa6.06□□□□□ -1.44
LPCAT4-202ENST00000562404 NHP2Q9NX24 153 aaKnown RBP6.06□□□□□ -1.44
LPCAT4-202ENST00000562404 PAM16Q9Y3D7 125 aa6.06□□□□□ -1.44
LPCAT4-202ENST00000562404 SPATA45Q537H7 98 aa6.05□□□□□ -1.44
LPCAT4-202ENST00000562404 C1orf195Q5TG92 126 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms