RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 NDUFC2O95298 119 aa14.38□□□□□ -0.11
NME3-202ENST00000561637 LITAFQ99732 161 aa14.38□□□□□ -0.11
NME3-202ENST00000561637 TPRXLQ17RH7 258 aa14.37□□□□□ -0.11
NME3-202ENST00000561637 S100A7L2Q5SY68 101 aa14.37□□□□□ -0.11
NME3-202ENST00000561637 Q6ZRX8 168 aa14.37□□□□□ -0.11
NME3-202ENST00000561637 TTTY13Q9BZ97 58 aa14.37□□□□□ -0.11
NME3-202ENST00000561637 S100A12P80511 92 aa14.36□□□□□ -0.11
NME3-202ENST00000561637 LINC01545Q5VT33 79 aa14.36□□□□□ -0.11
NME3-202ENST00000561637 SPAG11AQ6PDA7 123 aa14.36□□□□□ -0.11
NME3-202ENST00000561637 TRAV23DV6A0A075B6W5 121 aa14.35□□□□□ -0.11
NME3-202ENST00000561637 MOBPQ13875 183 aa14.35□□□□□ -0.11
NME3-202ENST00000561637 IGLV9-49A0A0B4J1Y8 123 aa14.34□□□□□ -0.11
NME3-202ENST00000561637 CTAG1AP78358 180 aa14.34□□□□□ -0.11
NME3-202ENST00000561637 CDIP1Q9H305 208 aa14.34□□□□□ -0.11
NME3-202ENST00000561637 C4orf48Q5BLP8 95 aa14.33□□□□□ -0.12
NME3-202ENST00000561637 ZNF73O43830 326 aaPredicted RBP14.3□□□□□ -0.12
NME3-202ENST00000561637 C3orf79P0CE67 100 aa14.3□□□□□ -0.12
NME3-202ENST00000561637 PET117Q6UWS5 81 aa14.3□□□□□ -0.12
NME3-202ENST00000561637 ST20-AS1Q8NBB2 130 aa14.3□□□□□ -0.12
NME3-202ENST00000561637 LINC00308Q8TCZ7 52 aa14.3□□□□□ -0.12
NME3-202ENST00000561637 ZNF815PA8K554 130 aa14.27□□□□□ -0.13
NME3-202ENST00000561637 LCE2DQ5TA82 110 aaPredicted RBP14.27□□□□□ -0.13
NME3-202ENST00000561637 CRCT1Q9UGL9 99 aa14.25□□□□□ -0.13
NME3-202ENST00000561637 TIMM17BO60830 172 aa14.24□□□□□ -0.13
NME3-202ENST00000561637 KRTDAPP60985 99 aa14.24□□□□□ -0.13
NME3-202ENST00000561637 SPANXCQ9NY87 97 aa14.24□□□□□ -0.13
NME3-202ENST00000561637 SPINK1P00995 79 aa14.23□□□□□ -0.13
NME3-202ENST00000561637 FP248Q71RG6 208 aaPredicted RBP14.23□□□□□ -0.13
NME3-202ENST00000561637 OR13C6PQ8NH95 151 aa14.23□□□□□ -0.13
NME3-202ENST00000561637 COA6Q5JTJ3 125 aaKnown RBP14.22□□□□□ -0.13
NME3-202ENST00000561637 FSIP2Q5CZC0 6907 aa14.22□□□□□ -0.13
NME3-202ENST00000561637 KRTAP13-3Q3SY46 172 aa14.21□□□□□ -0.13
NME3-202ENST00000561637 JOSD1Q15040 202 aaPredicted RBP14.2□□□□□ -0.14
NME3-202ENST00000561637 ANKRD39Q53RE8 183 aa14.2□□□□□ -0.14
NME3-202ENST00000561637 SSBP3-AS1Q7Z2R9 100 aa14.2□□□□□ -0.14
NME3-202ENST00000561637 C9orf153Q5TBE3 101 aa14.18□□□□□ -0.14
NME3-202ENST00000561637 Q8N377 158 aa14.18□□□□□ -0.14
NME3-202ENST00000561637 ATOH7Q8N100 152 aa14.17□□□□□ -0.14
NME3-202ENST00000561637 SPANXDQ9BXN6 97 aa14.14□□□□□ -0.15
NME3-202ENST00000561637 HINT1P49773 126 aaPredicted RBP14.1□□□□□ -0.15
NME3-202ENST00000561637 RPS29P62273 56 aaKnown RBP14.1□□□□□ -0.15
NME3-202ENST00000561637 C6orf99Q4VX62 202 aa14.1□□□□□ -0.15
NME3-202ENST00000561637 SCGB1D4Q6XE38 83 aa14.09□□□□□ -0.15
NME3-202ENST00000561637 PCP2Q8IVA1 136 aa14.09□□□□□ -0.15
NME3-202ENST00000561637 COX7BP24311 80 aa14.08□□□□□ -0.16
NME3-202ENST00000561637 LINC01547P58512 204 aaPredicted RBP14.08□□□□□ -0.16
NME3-202ENST00000561637 ELOF1P60002 83 aaKnown RBP14.08□□□□□ -0.16
NME3-202ENST00000561637 CBY1Q9Y3M2 126 aa14.08□□□□□ -0.16
NME3-202ENST00000561637 SPRR1BP22528 89 aa14.07□□□□□ -0.16
NME3-202ENST00000561637 KRTAP4-1Q9BYQ7 146 aa14.07□□□□□ -0.16
NME3-202ENST00000561637 C20orf202A1L168 122 aa14.06□□□□□ -0.16
NME3-202ENST00000561637 SLC25A20O43772 301 aa14.06□□□□□ -0.16
NME3-202ENST00000561637 DHRS4-AS1Q9P1J3 65 aa14.06□□□□□ -0.16
NME3-202ENST00000561637 LINC00518Q8N0U6 118 aa14.05□□□□□ -0.16
NME3-202ENST00000561637 C5orf52A6NGY3 159 aa14.04□□□□□ -0.16
NME3-202ENST00000561637 HRCT1Q6UXD1 115 aa14.04□□□□□ -0.16
NME3-202ENST00000561637 MUSTN1Q8IVN3 82 aa14.02□□□□□ -0.17
NME3-202ENST00000561637 ASB16-AS1Q495Z4 193 aa14.01□□□□□ -0.17
NME3-202ENST00000561637 DEFB105AQ8NG35 78 aa14.01□□□□□ -0.17
NME3-202ENST00000561637 Q1RN00 199 aa14□□□□□ -0.17
NME3-202ENST00000561637 A6NDN8 102 aa13.97□□□□□ -0.17
NME3-202ENST00000561637 IFITM1P13164 125 aa13.97□□□□□ -0.17
NME3-202ENST00000561637 LAMTOR3Q9UHA4 124 aa13.96□□□□□ -0.17
NME3-202ENST00000561637 TAL2Q16559 108 aa13.95□□□□□ -0.18
NME3-202ENST00000561637 HIST3H2BBQ8N257 126 aa13.95□□□□□ -0.18
NME3-202ENST00000561637 XP32Q5T750 250 aa13.94□□□□□ -0.18
NME3-202ENST00000561637 A0A0G2JQZ4 141 aa13.93□□□□□ -0.18
NME3-202ENST00000561637 SLC25A34Q6PIV7 304 aa13.93□□□□□ -0.18
NME3-202ENST00000561637 SMIM29Q86T20 159 aa13.93□□□□□ -0.18
NME3-202ENST00000561637 HIST1H2BLQ99880 126 aa13.93□□□□□ -0.18
NME3-202ENST00000561637 TRBV7-6A0A0J9YX20 115 aa13.92□□□□□ -0.18
NME3-202ENST00000561637 Q6ZVH6 145 aa13.91□□□□□ -0.18
NME3-202ENST00000561637 A0A1B0GWB2 263 aa13.9□□□□□ -0.18
NME3-202ENST00000561637 TEX49A0A1B0GTD5 131 aa13.89□□□□□ -0.19
NME3-202ENST00000561637 SEC61BP60468 96 aaKnown RBP13.89□□□□□ -0.19
NME3-202ENST00000561637 SMIM11BQ8TCY0 68 aa13.89□□□□□ -0.19
NME3-202ENST00000561637 COPS9Q8WXC6 57 aa13.89□□□□□ -0.19
NME3-202ENST00000561637 H7C2G1 150 aa13.87□□□□□ -0.19
NME3-202ENST00000561637 IGLV5-48A0A075B6I7 105 aa13.86□□□□□ -0.19
NME3-202ENST00000561637 LIMD2Q9BT23 127 aa13.86□□□□□ -0.19
NME3-202ENST00000561637 PRO1933Q9H354 126 aa13.84□□□□□ -0.19
NME3-202ENST00000561637 C9orf92A6NGG3 77 aa13.83□□□□□ -0.2
NME3-202ENST00000561637 S100A2P29034 98 aa13.83□□□□□ -0.2
NME3-202ENST00000561637 AKR1D1P51857 326 aa13.83□□□□□ -0.2
NME3-202ENST00000561637 LCE2CQ5TA81 110 aa13.83□□□□□ -0.2
NME3-202ENST00000561637 TRAV13-2A0A0B4J235 113 aa13.82□□□□□ -0.2
NME3-202ENST00000561637 SNRPEP62304 92 aaKnown RBP13.82□□□□□ -0.2
NME3-202ENST00000561637 CD164Q04900 197 aa13.79□□□□□ -0.2
NME3-202ENST00000561637 A4D1N5 150 aa13.78□□□□□ -0.2
NME3-202ENST00000561637 HSBP1L1C9JCN9 74 aa13.75□□□□□ -0.21
NME3-202ENST00000561637 C1orf195Q5TG92 126 aa13.73□□□□□ -0.21
NME3-202ENST00000561637 C12orf57Q99622 126 aa13.73□□□□□ -0.21
NME3-202ENST00000561637 PCOTHQ58A44 107 aa13.72□□□□□ -0.21
NME3-202ENST00000561637 S100A1P23297 94 aa13.71□□□□□ -0.21
NME3-202ENST00000561637 KRTAP19-2Q3LHN2 52 aa13.71□□□□□ -0.21
NME3-202ENST00000561637 LINC00575Q6W349 94 aa13.71□□□□□ -0.21
NME3-202ENST00000561637 NHP2Q9NX24 153 aaKnown RBP13.71□□□□□ -0.21
NME3-202ENST00000561637 S100A6P06703 90 aa13.7□□□□□ -0.22
NME3-202ENST00000561637 MT1HP80294 61 aa13.69□□□□□ -0.22
NME3-202ENST00000561637 Q5XG85 94 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms