RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, human

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZEB1-223	ENST00000561304	COLCA2	A8K830	154 aa		4.26	□□□□□ -1.73
ZEB1-223	ENST00000561304	LEPROT	O15243	131 aa		4.26	□□□□□ -1.73
ZEB1-223	ENST00000561304	FABP4	P15090	132 aa		4.26	□□□□□ -1.73
ZEB1-223	ENST00000561304	SPRR1A	P35321	89 aa		4.26	□□□□□ -1.73
ZEB1-223	ENST00000561304	HERV-K104	P63124	156 aa		4.26	□□□□□ -1.73
ZEB1-223	ENST00000561304	MYMX	A0A1B0GTQ4	84 aa		4.25	□□□□□ -1.73
ZEB1-223	ENST00000561304	LOC105371267	A0A1B0GV96	52 aa		4.25	□□□□□ -1.73
ZEB1-223	ENST00000561304	GAGE2A	Q6NT46	116 aa		4.25	□□□□□ -1.73
ZEB1-223	ENST00000561304	SMCR5	Q8TEV8	140 aa		4.25	□□□□□ -1.73
ZEB1-223	ENST00000561304	KCNQ1DN	Q9H478	68 aa		4.25	□□□□□ -1.73
ZEB1-223	ENST00000561304		J3QQQ9	107 aa		4.24	□□□□□ -1.73
ZEB1-223	ENST00000561304	PLN	P26678	52 aa		4.24	□□□□□ -1.73
ZEB1-223	ENST00000561304	UBE2V1	Q13404	147 aa		4.24	□□□□□ -1.73
ZEB1-223	ENST00000561304	SOSTDC1	Q6X4U4	206 aa		4.24	□□□□□ -1.73
ZEB1-223	ENST00000561304	LINC00337	Q8N6G1	96 aa		4.24	□□□□□ -1.73
ZEB1-223	ENST00000561304	FAT4	Q6V0I7	4981 aa		4.23	□□□□□ -1.73
ZEB1-223	ENST00000561304	LOC107984156	A0A0G2JMH3	177 aa		4.23	□□□□□ -1.73
ZEB1-223	ENST00000561304	ERC2-IT1	O76042	136 aa		4.23	□□□□□ -1.73
ZEB1-223	ENST00000561304	DPM2	O94777	84 aa		4.23	□□□□□ -1.73
ZEB1-223	ENST00000561304	IGKC	P01834	107 aa		4.23	□□□□□ -1.73
ZEB1-223	ENST00000561304	ARL17A	Q8IVW1	177 aa		4.23	□□□□□ -1.73
ZEB1-223	ENST00000561304	PPDPF	Q9H3Y8	114 aa		4.23	□□□□□ -1.73
ZEB1-223	ENST00000561304	HSPB8	Q9UJY1	196 aa		4.23	□□□□□ -1.73
ZEB1-223	ENST00000561304	ETDC	A0A1B0GVM5	59 aa		4.22	□□□□□ -1.73
ZEB1-223	ENST00000561304	NPC2	P61916	151 aa		4.22	□□□□□ -1.73
ZEB1-223	ENST00000561304	ADAMTSL4-AS1	Q5T5F5	129 aa		4.22	□□□□□ -1.73
ZEB1-223	ENST00000561304		Q9BRP9	147 aa		4.22	□□□□□ -1.73
ZEB1-223	ENST00000561304	MAP1LC3C	Q9BXW4	147 aa		4.22	□□□□□ -1.73
ZEB1-223	ENST00000561304	IGLV7-46	A0A075B6I9	117 aa		4.21	□□□□□ -1.74
ZEB1-223	ENST00000561304		A0A0J9YXY3	114 aa		4.21	□□□□□ -1.74
ZEB1-223	ENST00000561304	LINC00587	B1AMM8	73 aa		4.21	□□□□□ -1.74
ZEB1-223	ENST00000561304	LGALS3	P17931	250 aa	Known RBP	4.21	□□□□□ -1.74
ZEB1-223	ENST00000561304	DDT	P30046	118 aa		4.21	□□□□□ -1.74
ZEB1-223	ENST00000561304	NMU	P48645	174 aa		4.21	□□□□□ -1.74
ZEB1-223	ENST00000561304	TPRXL	Q17RH7	258 aa		4.21	□□□□□ -1.74
ZEB1-223	ENST00000561304	LINC00483	Q53H64	154 aa		4.21	□□□□□ -1.74
ZEB1-223	ENST00000561304		Q8NBF4	154 aa		4.21	□□□□□ -1.74
ZEB1-223	ENST00000561304	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.21	□□□□□ -1.74
ZEB1-223	ENST00000561304	TRBV10-2	A0A0K0K1G8	114 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	HIST1H2BK	O60814	126 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	IGLV6-57	P01721	117 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	HIST1H2BJ	P06899	126 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	HIST1H2BO	P23527	126 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	HIST1H2BB	P33778	126 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	HIST1H2BD	P58876	126 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	HERVK_113	P61574	105 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	HIST1H2BC	P62807	126 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	HIST2H2BE	Q16778	126 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	HIST1H2BH	Q93079	126 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	HIST1H2BN	Q99877	126 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	HIST1H2BM	Q99879	126 aa		4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304	SPANXB1	Q9NS25	103 aa	Predicted RBP	4.2	□□□□□ -1.74
ZEB1-223	ENST00000561304		E9PLD3	99 aa		4.19	□□□□□ -1.74
ZEB1-223	ENST00000561304	SYS1-DBNDD2	H3BUS1	97 aa		4.19	□□□□□ -1.74
ZEB1-223	ENST00000561304		Q6ZRX8	168 aa		4.19	□□□□□ -1.74
ZEB1-223	ENST00000561304	LITAF	Q99732	161 aa		4.19	□□□□□ -1.74
ZEB1-223	ENST00000561304	IGLV9-49	A0A0B4J1Y8	123 aa		4.18	□□□□□ -1.74
ZEB1-223	ENST00000561304	NDUFC2	O95298	119 aa		4.18	□□□□□ -1.74
ZEB1-223	ENST00000561304	CTAG1A	P78358	180 aa		4.18	□□□□□ -1.74
ZEB1-223	ENST00000561304	MOBP	Q13875	183 aa		4.18	□□□□□ -1.74
ZEB1-223	ENST00000561304	TTTY13	Q9BZ97	58 aa		4.18	□□□□□ -1.74
ZEB1-223	ENST00000561304	TRAV23DV6	A0A075B6W5	121 aa		4.17	□□□□□ -1.74
ZEB1-223	ENST00000561304	S100A7L2	Q5SY68	101 aa		4.17	□□□□□ -1.74
ZEB1-223	ENST00000561304	LINC01545	Q5VT33	79 aa		4.17	□□□□□ -1.74
ZEB1-223	ENST00000561304	SPAG11A	Q6PDA7	123 aa		4.17	□□□□□ -1.74
ZEB1-223	ENST00000561304		Q8N9P0	234 aa	Predicted RBP	4.17	□□□□□ -1.74
ZEB1-223	ENST00000561304	MIEN1	Q9BRT3	115 aa		4.17	□□□□□ -1.74
ZEB1-223	ENST00000561304	KRTAP13-3	Q3SY46	172 aa		4.16	□□□□□ -1.74
ZEB1-223	ENST00000561304	ST20-AS1	Q8NBB2	130 aa		4.16	□□□□□ -1.74
ZEB1-223	ENST00000561304	ZNF73	O43830	326 aa	Predicted RBP	4.15	□□□□□ -1.74
ZEB1-223	ENST00000561304	C3orf79	P0CE67	100 aa		4.15	□□□□□ -1.74
ZEB1-223	ENST00000561304	S100A12	P80511	92 aa		4.15	□□□□□ -1.74
ZEB1-223	ENST00000561304	FP248	Q71RG6	208 aa	Predicted RBP	4.15	□□□□□ -1.74
ZEB1-223	ENST00000561304		Q8N377	158 aa		4.15	□□□□□ -1.74
ZEB1-223	ENST00000561304	LINC00308	Q8TCZ7	52 aa		4.15	□□□□□ -1.74
ZEB1-223	ENST00000561304	ZNF815P	A8K554	130 aa		4.14	□□□□□ -1.75
ZEB1-223	ENST00000561304	SPINK1	P00995	79 aa		4.14	□□□□□ -1.75
ZEB1-223	ENST00000561304	SPANXC	Q9NY87	97 aa		4.14	□□□□□ -1.75
ZEB1-223	ENST00000561304	PAM16	Q9Y3D7	125 aa		4.14	□□□□□ -1.75
ZEB1-223	ENST00000561304	TIMM17B	O60830	172 aa		4.14	□□□□□ -1.75
ZEB1-223	ENST00000561304	KRTAP4-1	Q9BYQ7	146 aa		4.14	□□□□□ -1.75
ZEB1-223	ENST00000561304		A0A0U1RQV1	116 aa		4.13	□□□□□ -1.75
ZEB1-223	ENST00000561304	IGKV2-30	P06310	120 aa		4.13	□□□□□ -1.75
ZEB1-223	ENST00000561304	S100A6	P06703	90 aa		4.13	□□□□□ -1.75
ZEB1-223	ENST00000561304	KRTDAP	P60985	99 aa		4.13	□□□□□ -1.75
ZEB1-223	ENST00000561304	COA6	Q5JTJ3	125 aa	Known RBP	4.13	□□□□□ -1.75
ZEB1-223	ENST00000561304	C9orf153	Q5TBE3	101 aa		4.13	□□□□□ -1.75
ZEB1-223	ENST00000561304		Q75L30	129 aa		4.13	□□□□□ -1.75
ZEB1-223	ENST00000561304	SSBP3-AS1	Q7Z2R9	100 aa		4.13	□□□□□ -1.75
ZEB1-223	ENST00000561304	LINC00518	Q8N0U6	118 aa		4.13	□□□□□ -1.75
ZEB1-223	ENST00000561304	SEC61B	P60468	96 aa	Known RBP	4.12	□□□□□ -1.75
ZEB1-223	ENST00000561304	RPS29	P62273	56 aa	Known RBP	4.12	□□□□□ -1.75
ZEB1-223	ENST00000561304	JOSD1	Q15040	202 aa	Predicted RBP	4.12	□□□□□ -1.75
ZEB1-223	ENST00000561304	ATOH7	Q8N100	152 aa		4.12	□□□□□ -1.75
ZEB1-223	ENST00000561304	OR13C6P	Q8NH95	151 aa		4.12	□□□□□ -1.75
ZEB1-223	ENST00000561304	SPANXD	Q9BXN6	97 aa		4.11	□□□□□ -1.75
ZEB1-223	ENST00000561304	SPRR1B	P22528	89 aa		4.1	□□□□□ -1.75
ZEB1-223	ENST00000561304	AKR1D1	P51857	326 aa		4.1	□□□□□ -1.75
ZEB1-223	ENST00000561304	ELOF1	P60002	83 aa	Known RBP	4.1	□□□□□ -1.75

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