RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 SERTAD4-AS1Q5TG53 156 aa3.43□□□□□ -1.86
ZEB1-220ENST00000560909 MUSTN1Q8IVN3 82 aa3.43□□□□□ -1.86
ZEB1-220ENST00000560909 GAGE2DQ9UEU5 116 aa3.43□□□□□ -1.86
ZEB1-220ENST00000560909 IGKV2-28A0A075B6P5 120 aa3.42□□□□□ -1.86
ZEB1-220ENST00000560909 IGKV2-24A0A0C4DH68 120 aa3.42□□□□□ -1.86
ZEB1-220ENST00000560909 A0A1B0GWB2 263 aa3.42□□□□□ -1.86
ZEB1-220ENST00000560909 FAM168BA1KXE4 195 aa3.42□□□□□ -1.86
ZEB1-220ENST00000560909 IGKV2D-28P01615 120 aa3.42□□□□□ -1.86
ZEB1-220ENST00000560909 DDTP30046 118 aa3.42□□□□□ -1.86
ZEB1-220ENST00000560909 RPL24P83731 157 aaKnown RBP3.42□□□□□ -1.86
ZEB1-220ENST00000560909 SRSF9Q13242 221 aaKnown RBP eCLIP3.42□□□□□ -1.86
ZEB1-220ENST00000560909 CEND1Q8N111 149 aa3.42□□□□□ -1.86
ZEB1-220ENST00000560909 CIRBP-AS1Q8TBR5 109 aa3.42□□□□□ -1.86
ZEB1-220ENST00000560909 HIST1H4GQ99525 98 aa3.42□□□□□ -1.86
ZEB1-220ENST00000560909 ABCA13Q86UQ4 5058 aa3.42□□□□□ -1.86
ZEB1-220ENST00000560909 A4D1N5 150 aa3.41□□□□□ -1.86
ZEB1-220ENST00000560909 M0R378 163 aa3.41□□□□□ -1.86
ZEB1-220ENST00000560909 CDK2AP2O75956 126 aa3.41□□□□□ -1.86
ZEB1-220ENST00000560909 IGLV6-57P01721 117 aa3.41□□□□□ -1.86
ZEB1-220ENST00000560909 HNRNPA3P51991 378 aaKnown RBP3.41□□□□□ -1.86
ZEB1-220ENST00000560909 SCXQ7RTU7 201 aa3.41□□□□□ -1.86
ZEB1-220ENST00000560909 C22orf24Q9Y442 160 aa3.41□□□□□ -1.86
ZEB1-220ENST00000560909 IGLV1-50A0A075B6I6 118 aa3.4□□□□□ -1.87
ZEB1-220ENST00000560909 A0A0B4J2C4 111 aa3.4□□□□□ -1.87
ZEB1-220ENST00000560909 CFC1BP0CG36 223 aa3.4□□□□□ -1.87
ZEB1-220ENST00000560909 CFC1P0CG37 223 aa3.4□□□□□ -1.87
ZEB1-220ENST00000560909 FXYD2P54710 66 aa3.4□□□□□ -1.87
ZEB1-220ENST00000560909 CTAG1AP78358 180 aa3.4□□□□□ -1.87
ZEB1-220ENST00000560909 PRR3P79522 188 aaKnown RBP3.4□□□□□ -1.87
ZEB1-220ENST00000560909 LBHQ53QV2 105 aaPredicted RBP3.4□□□□□ -1.87
ZEB1-220ENST00000560909 BVES-AS1Q5T3Y7 98 aa3.4□□□□□ -1.87
ZEB1-220ENST00000560909 LINC00337Q8N6G1 96 aa3.4□□□□□ -1.87
ZEB1-220ENST00000560909 C7orf33Q8WU49 177 aa3.4□□□□□ -1.87
ZEB1-220ENST00000560909 LINC00167Q96N53 147 aa3.4□□□□□ -1.87
ZEB1-220ENST00000560909 KCNQ1DNQ9H478 68 aa3.4□□□□□ -1.87
ZEB1-220ENST00000560909 TRAV13-2A0A0B4J235 113 aa3.39□□□□□ -1.87
ZEB1-220ENST00000560909 KRTAP4-16G5E9R7 235 aaPredicted RBP3.39□□□□□ -1.87
ZEB1-220ENST00000560909 M0QXV9 152 aa3.39□□□□□ -1.87
ZEB1-220ENST00000560909 SPRR1AP35321 89 aa3.39□□□□□ -1.87
ZEB1-220ENST00000560909 MRPL55Q7Z7F7 128 aaKnown RBP3.39□□□□□ -1.87
ZEB1-220ENST00000560909 KRTAP11-1Q8IUC1 163 aa3.39□□□□□ -1.87
ZEB1-220ENST00000560909 Q8N9P0 234 aaPredicted RBP3.39□□□□□ -1.87
ZEB1-220ENST00000560909 SRRM2Q9UQ35 2752 aaKnown RBP3.38□□□□□ -1.87
ZEB1-220ENST00000560909 TRBV10-3A0A0K0K1G6 114 aa3.38□□□□□ -1.87
ZEB1-220ENST00000560909 M0R143 59 aa3.38□□□□□ -1.87
ZEB1-220ENST00000560909 NPC2P61916 151 aa3.38□□□□□ -1.87
ZEB1-220ENST00000560909 PHF5AQ7RTV0 110 aaKnown RBP3.38□□□□□ -1.87
ZEB1-220ENST00000560909 FAM19A5Q7Z5A7 132 aaPredicted RBP3.38□□□□□ -1.87
ZEB1-220ENST00000560909 NKAPP1Q8N9T2 125 aa3.38□□□□□ -1.87
ZEB1-220ENST00000560909 TMEM126AQ9H061 195 aa3.38□□□□□ -1.87
ZEB1-220ENST00000560909 TRBV7-6A0A0J9YX20 115 aa3.37□□□□□ -1.87
ZEB1-220ENST00000560909 KRTAP10-4P60372 401 aaPredicted RBP3.37□□□□□ -1.87
ZEB1-220ENST00000560909 KRTAP13-1Q8IUC0 172 aa3.37□□□□□ -1.87
ZEB1-220ENST00000560909 DPH3Q96FX2 82 aa3.37□□□□□ -1.87
ZEB1-220ENST00000560909 PRO1854Q9UHT4 67 aa3.37□□□□□ -1.87
ZEB1-220ENST00000560909 CBY1Q9Y3M2 126 aa3.37□□□□□ -1.87
ZEB1-220ENST00000560909 PCLOQ9Y6V0 5065 aa3.37□□□□□ -1.87
ZEB1-220ENST00000560909 PKHD1L1Q86WI1 4243 aa3.36□□□□□ -1.87
ZEB1-220ENST00000560909 H0Y9J4 135 aa3.36□□□□□ -1.87
ZEB1-220ENST00000560909 PRYO14603 147 aa3.36□□□□□ -1.87
ZEB1-220ENST00000560909 NCR3O14931 201 aa3.36□□□□□ -1.87
ZEB1-220ENST00000560909 RPL28P46779 137 aaKnown RBP3.36□□□□□ -1.87
ZEB1-220ENST00000560909 HINT1P49773 126 aaPredicted RBP3.36□□□□□ -1.87
ZEB1-220ENST00000560909 SNHG12Q9BXW3 62 aa3.36□□□□□ -1.87
ZEB1-220ENST00000560909 PSORS1C2Q9UIG4 136 aa3.36□□□□□ -1.87
ZEB1-220ENST00000560909 TRAV23DV6A0A075B6W5 121 aa3.35□□□□□ -1.87
ZEB1-220ENST00000560909 A6NDN8 102 aa3.35□□□□□ -1.87
ZEB1-220ENST00000560909 GAGE10A6NGK3 116 aa3.35□□□□□ -1.87
ZEB1-220ENST00000560909 RPL37AP8A6NKH3 93 aa3.35□□□□□ -1.87
ZEB1-220ENST00000560909 ZNF73O43830 326 aaPredicted RBP3.35□□□□□ -1.87
ZEB1-220ENST00000560909 BCE1O60756 84 aa3.35□□□□□ -1.87
ZEB1-220ENST00000560909 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
ZEB1-220ENST00000560909 SMIM11BQ8TCY0 68 aa3.35□□□□□ -1.87
ZEB1-220ENST00000560909 NHP2Q9NX24 153 aaKnown RBP3.35□□□□□ -1.87
ZEB1-220ENST00000560909 K7ERJ3 54 aa3.34□□□□□ -1.87
ZEB1-220ENST00000560909 INAFM2P0DMQ5 153 aa3.34□□□□□ -1.87
ZEB1-220ENST00000560909 RPL13AP40429 203 aaKnown RBP3.34□□□□□ -1.87
ZEB1-220ENST00000560909 HAMPP81172 84 aa3.34□□□□□ -1.87
ZEB1-220ENST00000560909 S100A7L2Q5SY68 101 aa3.34□□□□□ -1.87
ZEB1-220ENST00000560909 REG3GQ6UW15 175 aa3.34□□□□□ -1.87
ZEB1-220ENST00000560909 RAB37Q96AX2 223 aa3.34□□□□□ -1.87
ZEB1-220ENST00000560909 TAX1BP3O14907 124 aa3.33□□□□□ -1.88
ZEB1-220ENST00000560909 TSPAN13O95857 204 aa3.33□□□□□ -1.88
ZEB1-220ENST00000560909 IGLV7-43P04211 117 aa3.33□□□□□ -1.88
ZEB1-220ENST00000560909 ELOF1P60002 83 aaKnown RBP3.33□□□□□ -1.88
ZEB1-220ENST00000560909 UBE2BP63146 152 aa3.33□□□□□ -1.88
ZEB1-220ENST00000560909 C6orf99Q4VX62 202 aa3.33□□□□□ -1.88
ZEB1-220ENST00000560909 Q6ZRX8 168 aa3.33□□□□□ -1.88
ZEB1-220ENST00000560909 OR13C6PQ8NH95 151 aa3.33□□□□□ -1.88
ZEB1-220ENST00000560909 PCP4L1A6NKN8 68 aa3.32□□□□□ -1.88
ZEB1-220ENST00000560909 H0YGX0 51 aa3.32□□□□□ -1.88
ZEB1-220ENST00000560909 TRIAP1O43715 76 aa3.32□□□□□ -1.88
ZEB1-220ENST00000560909 ZNF861PO60384 105 aa3.32□□□□□ -1.88
ZEB1-220ENST00000560909 SMR3BP02814 79 aaPredicted RBP3.32□□□□□ -1.88
ZEB1-220ENST00000560909 COL5A1-AS1Q5SY13 56 aa3.32□□□□□ -1.88
ZEB1-220ENST00000560909 DIRC1Q969H9 104 aa3.32□□□□□ -1.88
ZEB1-220ENST00000560909 Q9BRP9 147 aa3.32□□□□□ -1.88
ZEB1-220ENST00000560909 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
ZEB1-220ENST00000560909 A0A1B0GX51 115 aa3.31□□□□□ -1.88
ZEB1-220ENST00000560909 COX7BP24311 80 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 273.5 ms