RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 CHCHD10Q8WYQ3 142 aaPredicted RBP5.83□□□□□ -1.48
CCDC33-209ENST00000560565 REG3AQ06141 175 aa5.82□□□□□ -1.48
CCDC33-209ENST00000560565 SPAG11BQ08648 103 aa5.82□□□□□ -1.48
CCDC33-209ENST00000560565 KIAA0087Q14695 138 aa5.82□□□□□ -1.48
CCDC33-209ENST00000560565 TM2D3Q9BRN9 247 aa5.82□□□□□ -1.48
CCDC33-209ENST00000560565 TRBV7-4A0A0J9YYF1 115 aa5.81□□□□□ -1.48
CCDC33-209ENST00000560565 C4orf26Q17RF5 130 aa5.81□□□□□ -1.48
CCDC33-209ENST00000560565 X6R8D5 127 aa5.81□□□□□ -1.48
CCDC33-209ENST00000560565 HERC1Q15751 4861 aa5.81□□□□□ -1.48
CCDC33-209ENST00000560565 CSMD3Q7Z407 3707 aa5.8□□□□□ -1.48
CCDC33-209ENST00000560565 ANGP03950 147 aaKnown RBP5.8□□□□□ -1.48
CCDC33-209ENST00000560565 Q6ZQY7 126 aa5.8□□□□□ -1.48
CCDC33-209ENST00000560565 Q8N3U1 123 aa5.8□□□□□ -1.48
CCDC33-209ENST00000560565 CYSTM1Q9H1C7 97 aa5.8□□□□□ -1.48
CCDC33-209ENST00000560565 F8WEM9 126 aa5.79□□□□□ -1.48
CCDC33-209ENST00000560565 BPY2O14599 106 aa5.79□□□□□ -1.48
CCDC33-209ENST00000560565 ZNF73O43830 326 aaPredicted RBP5.79□□□□□ -1.48
CCDC33-209ENST00000560565 DEFB130BP0DP73 79 aa5.79□□□□□ -1.48
CCDC33-209ENST00000560565 DEFB130AP0DP74 79 aa5.79□□□□□ -1.48
CCDC33-209ENST00000560565 ELOF1P60002 83 aaKnown RBP5.79□□□□□ -1.48
CCDC33-209ENST00000560565 NREPQ16612 68 aa5.79□□□□□ -1.48
CCDC33-209ENST00000560565 DEFB135Q30KP9 77 aa5.79□□□□□ -1.48
CCDC33-209ENST00000560565 LELP1Q5T871 98 aa5.79□□□□□ -1.48
CCDC33-209ENST00000560565 LINC00269Q8N2A0 174 aa5.79□□□□□ -1.48
CCDC33-209ENST00000560565 TMEM254Q8TBM7 123 aa5.79□□□□□ -1.48
CCDC33-209ENST00000560565 M0R378 163 aa5.78□□□□□ -1.48
CCDC33-209ENST00000560565 HIGD2BQ4VC39 106 aa5.78□□□□□ -1.48
CCDC33-209ENST00000560565 ABCA13Q86UQ4 5058 aa5.77□□□□□ -1.49
CCDC33-209ENST00000560565 C3orf84H3BNL1 204 aa5.77□□□□□ -1.49
CCDC33-209ENST00000560565 Q8NAQ8 132 aa5.77□□□□□ -1.49
CCDC33-209ENST00000560565 PRYO14603 147 aa5.76□□□□□ -1.49
CCDC33-209ENST00000560565 OXTP01178 125 aa5.76□□□□□ -1.49
CCDC33-209ENST00000560565 SPART-AS1P0CW21 52 aa5.76□□□□□ -1.49
CCDC33-209ENST00000560565 FUSP35637 526 aaKnown RBP eCLIP5.76□□□□□ -1.49
CCDC33-209ENST00000560565 RETNQ9HD89 108 aa5.76□□□□□ -1.49
CCDC33-209ENST00000560565 STARD9Q9P2P6 4700 aa5.76□□□□□ -1.49
CCDC33-209ENST00000560565 NDUFB1O75438 58 aa5.75□□□□□ -1.49
CCDC33-209ENST00000560565 DAD1P61803 113 aa5.75□□□□□ -1.49
CCDC33-209ENST00000560565 PRR34Q9NV39 138 aa5.75□□□□□ -1.49
CCDC33-209ENST00000560565 V9GYY9 64 aa5.75□□□□□ -1.49
CCDC33-209ENST00000560565 KIAA1109Q2LD37 5005 aa5.74□□□□□ -1.49
CCDC33-209ENST00000560565 ESRGQ1W209 222 aa5.74□□□□□ -1.49
CCDC33-209ENST00000560565 CASC10Q5T4H9 136 aa5.74□□□□□ -1.49
CCDC33-209ENST00000560565 KRTAP3-3Q9BYR6 98 aa5.74□□□□□ -1.49
CCDC33-209ENST00000560565 KRTAP3-2Q9BYR7 98 aa5.74□□□□□ -1.49
CCDC33-209ENST00000560565 DHRS4-AS1Q9P1J3 65 aa5.74□□□□□ -1.49
CCDC33-209ENST00000560565 PRR3P79522 188 aaKnown RBP5.73□□□□□ -1.49
CCDC33-209ENST00000560565 RMI2Q96E14 147 aa5.73□□□□□ -1.49
CCDC33-209ENST00000560565 C1orf43Q9BWL3 253 aa5.73□□□□□ -1.49
CCDC33-209ENST00000560565 CELA1Q9UNI1 258 aa5.73□□□□□ -1.49
CCDC33-209ENST00000560565 TRAV10A0A0B4J240 114 aa5.72□□□□□ -1.49
CCDC33-209ENST00000560565 H3BNG1 76 aa5.72□□□□□ -1.49
CCDC33-209ENST00000560565 CLPSL2Q6UWE3 100 aa5.72□□□□□ -1.49
CCDC33-209ENST00000560565 LYSTQ99698 3801 aa5.72□□□□□ -1.49
CCDC33-209ENST00000560565 SNURFQ9Y675 71 aa5.72□□□□□ -1.49
CCDC33-209ENST00000560565 PLECQ15149 4684 aaKnown RBP5.72□□□□□ -1.49
CCDC33-209ENST00000560565 A0A0U1RQV1 116 aa5.71□□□□□ -1.5
CCDC33-209ENST00000560565 UNQ6190/PRO20217Q6UXQ8 127 aa5.71□□□□□ -1.5
CCDC33-209ENST00000560565 CAMK2N2Q96S95 79 aa5.71□□□□□ -1.5
CCDC33-209ENST00000560565 LINC00336Q6ZUF6 198 aa5.7□□□□□ -1.5
CCDC33-209ENST00000560565 LINC00528Q8N1L1 170 aa5.7□□□□□ -1.5
CCDC33-209ENST00000560565 IGLV10-54A0A075B6I4 117 aa5.69□□□□□ -1.5
CCDC33-209ENST00000560565 IGKV4-1P06312 121 aa5.69□□□□□ -1.5
CCDC33-209ENST00000560565 OCR1Q9BZK8 76 aa5.69□□□□□ -1.5
CCDC33-209ENST00000560565 IGLV5-48A0A075B6I7 105 aa5.68□□□□□ -1.5
CCDC33-209ENST00000560565 DEFB4AO15263 64 aa5.68□□□□□ -1.5
CCDC33-209ENST00000560565 VPREB1P12018 145 aa5.68□□□□□ -1.5
CCDC33-209ENST00000560565 C9orf116Q5BN46 136 aaPredicted RBP5.68□□□□□ -1.5
CCDC33-209ENST00000560565 FP248Q71RG6 208 aaPredicted RBP5.68□□□□□ -1.5
CCDC33-209ENST00000560565 NKAPP1Q8N9T2 125 aa5.68□□□□□ -1.5
CCDC33-209ENST00000560565 H3BPC8 53 aa5.67□□□□□ -1.5
CCDC33-209ENST00000560565 C1orf195Q5TG92 126 aa5.67□□□□□ -1.5
CCDC33-209ENST00000560565 BRK1Q8WUW1 75 aa5.67□□□□□ -1.5
CCDC33-209ENST00000560565 C6orf48Q9UBA6 75 aa5.67□□□□□ -1.5
CCDC33-209ENST00000560565 PLA2G2DQ9UNK4 145 aa5.67□□□□□ -1.5
CCDC33-209ENST00000560565 FRAS1Q86XX4 4008 aa5.66□□□□□ -1.5
CCDC33-209ENST00000560565 LCE6AA0A183 80 aa5.66□□□□□ -1.5
CCDC33-209ENST00000560565 C11orf45Q8TAV5 145 aa5.66□□□□□ -1.5
CCDC33-209ENST00000560565 KCNQ1DNQ9H478 68 aa5.66□□□□□ -1.5
CCDC33-209ENST00000560565 KLK12Q9UKR0 248 aa5.66□□□□□ -1.5
CCDC33-209ENST00000560565 A0A096LPF7 62 aa5.65□□□□□ -1.5
CCDC33-209ENST00000560565 KRTAP9-6A0A140TA67 174 aa5.65□□□□□ -1.5
CCDC33-209ENST00000560565 ETDCA0A1B0GVM5 59 aa5.65□□□□□ -1.5
CCDC33-209ENST00000560565 Q1T7F1 81 aa5.65□□□□□ -1.5
CCDC33-209ENST00000560565 C10orf25Q5T742 122 aa5.65□□□□□ -1.5
CCDC33-209ENST00000560565 ALMS1Q8TCU4 4167 aa5.65□□□□□ -1.51
CCDC33-209ENST00000560565 NUPR2A6NF83 97 aa5.64□□□□□ -1.51
CCDC33-209ENST00000560565 MP68P56378 58 aa5.64□□□□□ -1.51
CCDC33-209ENST00000560565 PRR15Q8IV56 129 aa5.64□□□□□ -1.51
CCDC33-209ENST00000560565 CYP4F30PQ9H0H9 118 aa5.64□□□□□ -1.51
CCDC33-209ENST00000560565 Q8NDZ9 215 aa5.63□□□□□ -1.51
CCDC33-209ENST00000560565 DEFB131BA0A096LNP1 70 aa5.62□□□□□ -1.51
CCDC33-209ENST00000560565 RPL37AP8A6NKH3 93 aa5.62□□□□□ -1.51
CCDC33-209ENST00000560565 M0R2N4 97 aa5.62□□□□□ -1.51
CCDC33-209ENST00000560565 TLX1NBP0CAT3 122 aa5.62□□□□□ -1.51
CCDC33-209ENST00000560565 HTN3P15516 51 aa5.62□□□□□ -1.51
CCDC33-209ENST00000560565 Q6ZTC4 211 aa5.62□□□□□ -1.51
CCDC33-209ENST00000560565 MRPL55Q7Z7F7 128 aaKnown RBP5.62□□□□□ -1.51
CCDC33-209ENST00000560565 Q8NBF4 154 aa5.62□□□□□ -1.51
CCDC33-209ENST00000560565 XAGE1AQ9HD64 81 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms