RNA–Protein interactions for RNA: ENST00000560519.1

HERC1-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-209ENST00000560519 BOD1L2Q8IYS8 172 aa5.54□□□□□ -1.52
HERC1-209ENST00000560519 TMEM126AQ9H061 195 aa5.54□□□□□ -1.52
HERC1-209ENST00000560519 LOC107984156A0A0G2JMH3 177 aa5.53□□□□□ -1.52
HERC1-209ENST00000560519 TMEM238C9JI98 176 aa5.53□□□□□ -1.52
HERC1-209ENST00000560519 GHRHP01286 108 aa5.53□□□□□ -1.52
HERC1-209ENST00000560519 VPREB1P12018 145 aa5.53□□□□□ -1.52
HERC1-209ENST00000560519 LINC01547P58512 204 aaPredicted RBP5.53□□□□□ -1.52
HERC1-209ENST00000560519 JOSD1Q15040 202 aaPredicted RBP5.53□□□□□ -1.52
HERC1-209ENST00000560519 ARL17AQ8IVW1 177 aa5.53□□□□□ -1.52
HERC1-209ENST00000560519 COPS9Q8WXC6 57 aa5.53□□□□□ -1.52
HERC1-209ENST00000560519 ZNF706Q9Y5V0 76 aaPredicted RBP5.53□□□□□ -1.52
HERC1-209ENST00000560519 LINC00337Q8N6G1 96 aa5.52□□□□□ -1.53
HERC1-209ENST00000560519 DAND5Q8N907 189 aa5.52□□□□□ -1.53
HERC1-209ENST00000560519 TTTY13Q9BZ97 58 aa5.52□□□□□ -1.53
HERC1-209ENST00000560519 M0R378 163 aa5.51□□□□□ -1.53
HERC1-209ENST00000560519 Q6ZVH6 145 aa5.51□□□□□ -1.53
HERC1-209ENST00000560519 PCP2Q8IVA1 136 aa5.51□□□□□ -1.53
HERC1-209ENST00000560519 VAMP8Q9BV40 100 aa5.51□□□□□ -1.53
HERC1-209ENST00000560519 NDUFC2O95298 119 aa5.5□□□□□ -1.53
HERC1-209ENST00000560519 S100A12P80511 92 aa5.5□□□□□ -1.53
HERC1-209ENST00000560519 ASB16-AS1Q495Z4 193 aa5.5□□□□□ -1.53
HERC1-209ENST00000560519 ADAMTSL4-AS1Q5T5F5 129 aa5.5□□□□□ -1.53
HERC1-209ENST00000560519 LITAFQ99732 161 aa5.5□□□□□ -1.53
HERC1-209ENST00000560519 HIGD2AQ9BW72 106 aa5.5□□□□□ -1.53
HERC1-209ENST00000560519 SPANXB1Q9NS25 103 aaPredicted RBP5.5□□□□□ -1.53
HERC1-209ENST00000560519 TRBV10-2A0A0K0K1G8 114 aa5.49□□□□□ -1.53
HERC1-209ENST00000560519 IFITM1P13164 125 aa5.49□□□□□ -1.53
HERC1-209ENST00000560519 SEC61BP60468 96 aaKnown RBP5.49□□□□□ -1.53
HERC1-209ENST00000560519 LINC00308Q8TCZ7 52 aa5.49□□□□□ -1.53
HERC1-209ENST00000560519 SPANXDQ9BXN6 97 aa5.49□□□□□ -1.53
HERC1-209ENST00000560519 SPANXCQ9NY87 97 aa5.49□□□□□ -1.53
HERC1-209ENST00000560519 NCR3O14931 201 aa5.48□□□□□ -1.53
HERC1-209ENST00000560519 COX8AP10176 69 aa5.48□□□□□ -1.53
HERC1-209ENST00000560519 NPC2P61916 151 aa5.48□□□□□ -1.53
HERC1-209ENST00000560519 SPATA45Q537H7 98 aa5.48□□□□□ -1.53
HERC1-209ENST00000560519 C3orf22Q8N5N4 141 aa5.48□□□□□ -1.53
HERC1-209ENST00000560519 Q8NDZ9 215 aa5.48□□□□□ -1.53
HERC1-209ENST00000560519 PAM16Q9Y3D7 125 aa5.48□□□□□ -1.53
HERC1-209ENST00000560519 CBY1Q9Y3M2 126 aa5.48□□□□□ -1.53
HERC1-209ENST00000560519 DLEU1O43261 78 aa5.47□□□□□ -1.53
HERC1-209ENST00000560519 EIF4EBP3O60516 100 aaPredicted RBP5.47□□□□□ -1.53
HERC1-209ENST00000560519 SPINK1P00995 79 aa5.47□□□□□ -1.53
HERC1-209ENST00000560519 KRTAP13-3Q3SY46 172 aa5.47□□□□□ -1.53
HERC1-209ENST00000560519 PYY3Q5JQD4 70 aa5.47□□□□□ -1.53
HERC1-209ENST00000560519 SOSTDC1Q6X4U4 206 aa5.47□□□□□ -1.53
HERC1-209ENST00000560519 SPRR4Q96PI1 79 aa5.47□□□□□ -1.53
HERC1-209ENST00000560519 S100A7L2Q5SY68 101 aa5.46□□□□□ -1.54
HERC1-209ENST00000560519 LINC00518Q8N0U6 118 aa5.46□□□□□ -1.54
HERC1-209ENST00000560519 TRBV10-3A0A0K0K1G6 114 aa5.45□□□□□ -1.54
HERC1-209ENST00000560519 PRYO14603 147 aa5.45□□□□□ -1.54
HERC1-209ENST00000560519 DDTP30046 118 aa5.45□□□□□ -1.54
HERC1-209ENST00000560519 RPS29P62273 56 aaKnown RBP5.45□□□□□ -1.54
HERC1-209ENST00000560519 LCE2CQ5TA81 110 aa5.45□□□□□ -1.54
HERC1-209ENST00000560519 SLC25A34Q6PIV7 304 aa5.45□□□□□ -1.54
HERC1-209ENST00000560519 Q8NBF4 154 aa5.45□□□□□ -1.54
HERC1-209ENST00000560519 KCNQ1DNQ9H478 68 aa5.45□□□□□ -1.54
HERC1-209ENST00000560519 MUSTN1Q8IVN3 82 aa5.44□□□□□ -1.54
HERC1-209ENST00000560519 C14orf144Q96I85 54 aa5.44□□□□□ -1.54
HERC1-209ENST00000560519 IGLV6-57P01721 117 aa5.43□□□□□ -1.54
HERC1-209ENST00000560519 OR13C6PQ8NH95 151 aa5.43□□□□□ -1.54
HERC1-209ENST00000560519 HIST1H4GQ99525 98 aa5.43□□□□□ -1.54
HERC1-209ENST00000560519 ETDCA0A1B0GVM5 59 aa5.42□□□□□ -1.54
HERC1-209ENST00000560519 HIGD1BQ9P298 99 aa5.42□□□□□ -1.54
HERC1-209ENST00000560519 TRAV23DV6A0A075B6W5 121 aa5.41□□□□□ -1.54
HERC1-209ENST00000560519 TRAV13-2A0A0B4J235 113 aa5.41□□□□□ -1.54
HERC1-209ENST00000560519 SPRR1AP35321 89 aa5.41□□□□□ -1.54
HERC1-209ENST00000560519 HINT1P49773 126 aaPredicted RBP5.41□□□□□ -1.54
HERC1-209ENST00000560519 CRCT1Q9UGL9 99 aa5.41□□□□□ -1.54
HERC1-209ENST00000560519 A6NDN8 102 aa5.4□□□□□ -1.54
HERC1-209ENST00000560519 SLC25A20O43772 301 aa5.4□□□□□ -1.54
HERC1-209ENST00000560519 SMIM6P0DI80 62 aa5.4□□□□□ -1.54
HERC1-209ENST00000560519 LINC00483Q53H64 154 aa5.4□□□□□ -1.54
HERC1-209ENST00000560519 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.55
HERC1-209ENST00000560519 A4D1N5 150 aa5.39□□□□□ -1.55
HERC1-209ENST00000560519 ZNF73O43830 326 aaPredicted RBP5.39□□□□□ -1.55
HERC1-209ENST00000560519 TAL2Q16559 108 aa5.39□□□□□ -1.55
HERC1-209ENST00000560519 Q8N377 158 aa5.39□□□□□ -1.55
HERC1-209ENST00000560519 UQCR10Q9UDW1 63 aa5.39□□□□□ -1.55
HERC1-209ENST00000560519 KRTAP4-16G5E9R7 235 aaPredicted RBP5.38□□□□□ -1.55
HERC1-209ENST00000560519 CFC1BP0CG36 223 aa5.38□□□□□ -1.55
HERC1-209ENST00000560519 MOBPQ13875 183 aa5.38□□□□□ -1.55
HERC1-209ENST00000560519 XP32Q5T750 250 aa5.38□□□□□ -1.55
HERC1-209ENST00000560519 C2orf91Q6ZV80 131 aa5.38□□□□□ -1.55
HERC1-209ENST00000560519 SMCR5Q8TEV8 140 aa5.38□□□□□ -1.55
HERC1-209ENST00000560519 IGLV9-49A0A0B4J1Y8 123 aa5.37□□□□□ -1.55
HERC1-209ENST00000560519 TMEM238LA0A1B0GVL6 79 aa5.37□□□□□ -1.55
HERC1-209ENST00000560519 B5MCH6 92 aa5.37□□□□□ -1.55
HERC1-209ENST00000560519 Q6ZRX8 168 aa5.37□□□□□ -1.55
HERC1-209ENST00000560519 SSBP3-AS1Q7Z2R9 100 aa5.37□□□□□ -1.55
HERC1-209ENST00000560519 KRTAP4-1Q9BYQ7 146 aa5.36□□□□□ -1.55
HERC1-209ENST00000560519 TRBV7-6A0A0J9YX20 115 aa5.35□□□□□ -1.55
HERC1-209ENST00000560519 LORP23490 312 aaPredicted RBP5.35□□□□□ -1.55
HERC1-209ENST00000560519 HSD52Q0P140 79 aa5.35□□□□□ -1.55
HERC1-209ENST00000560519 C6orf99Q4VX62 202 aa5.35□□□□□ -1.55
HERC1-209ENST00000560519 GAGE2AQ6NT46 116 aa5.35□□□□□ -1.55
HERC1-209ENST00000560519 CEND1Q8N111 149 aa5.35□□□□□ -1.55
HERC1-209ENST00000560519 LOC105371267A0A1B0GV96 52 aa5.34□□□□□ -1.55
HERC1-209ENST00000560519 A0A1B0GWB2 263 aa5.34□□□□□ -1.55
HERC1-209ENST00000560519 COX7BP24311 80 aa5.34□□□□□ -1.55
HERC1-209ENST00000560519 VAMP3Q15836 100 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms