RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 TMEM254Q8TBM7 123 aa9.12□□□□□ -0.95
TRAF3-208ENST00000560371 TP53AIP1Q9HCN2 124 aa9.12□□□□□ -0.95
TRAF3-208ENST00000560371 LINC00313P59037 77 aa9.11□□□□□ -0.95
TRAF3-208ENST00000560371 NOTCH1P46531 2555 aa9.11□□□□□ -0.95
TRAF3-208ENST00000560371 SSBP3-AS1Q7Z2R9 100 aa9.11□□□□□ -0.95
TRAF3-208ENST00000560371 LINC00476Q8WZB0 136 aa9.11□□□□□ -0.95
TRAF3-208ENST00000560371 BCE1O60756 84 aa9.1□□□□□ -0.95
TRAF3-208ENST00000560371 Q8NBF4 154 aa9.1□□□□□ -0.95
TRAF3-208ENST00000560371 ATP11AUNQ6ZP68 121 aa9.09□□□□□ -0.95
TRAF3-208ENST00000560371 CHD9Q3L8U1 2897 aa9.09□□□□□ -0.95
TRAF3-208ENST00000560371 RPL37AP61513 92 aaKnown RBP9.09□□□□□ -0.95
TRAF3-208ENST00000560371 BAHCC1Q9P281 2608 aa9.09□□□□□ -0.95
TRAF3-208ENST00000560371 A0A1B0GW54 56 aa9.09□□□□□ -0.95
TRAF3-208ENST00000560371 KRTAP10-11P60412 298 aa9.09□□□□□ -0.95
TRAF3-208ENST00000560371 Q96NJ1 140 aa9.08□□□□□ -0.96
TRAF3-208ENST00000560371 CSNK1G2-AS1Q8NCQ2 148 aa9.08□□□□□ -0.96
TRAF3-208ENST00000560371 KLK9Q2XQG4 91 aa9.07□□□□□ -0.96
TRAF3-208ENST00000560371 APLNQ9ULZ1 77 aa9.07□□□□□ -0.96
TRAF3-208ENST00000560371 SMIM29Q86T20 159 aa9.07□□□□□ -0.96
TRAF3-208ENST00000560371 CELSR3Q9NYQ7 3312 aa9.05□□□□□ -0.96
TRAF3-208ENST00000560371 A0A096LNT2 108 aa9.04□□□□□ -0.96
TRAF3-208ENST00000560371 ST20-AS1Q8NBB2 130 aa9.03□□□□□ -0.96
TRAF3-208ENST00000560371 FAM168BA1KXE4 195 aa9.03□□□□□ -0.96
TRAF3-208ENST00000560371 FAM218AQ96MZ4 157 aa9.03□□□□□ -0.96
TRAF3-208ENST00000560371 C19orf73Q9NVV2 129 aa9.02□□□□□ -0.97
TRAF3-208ENST00000560371 DMBT1Q9UGM3 2413 aaPredicted RBP9.02□□□□□ -0.97
TRAF3-208ENST00000560371 GCN1Q92616 2671 aaKnown RBP9□□□□□ -0.97
TRAF3-208ENST00000560371 Q6ZQT0 140 aa8.99□□□□□ -0.97
TRAF3-208ENST00000560371 VPREB1P12018 145 aa8.99□□□□□ -0.97
TRAF3-208ENST00000560371 IGLV6-57P01721 117 aa8.98□□□□□ -0.97
TRAF3-208ENST00000560371 TRAV22A0A0B4J277 110 aa8.97□□□□□ -0.97
TRAF3-208ENST00000560371 KRTAP10-3P60369 221 aa8.97□□□□□ -0.97
TRAF3-208ENST00000560371 FRYQ5TBA9 3013 aa8.96□□□□□ -0.97
TRAF3-208ENST00000560371 ITPR2Q14571 2701 aa8.96□□□□□ -0.97
TRAF3-208ENST00000560371 LOC110117498A0A087WWA1 95 aa8.96□□□□□ -0.97
TRAF3-208ENST00000560371 C8orf87E5RJ46 101 aa8.96□□□□□ -0.98
TRAF3-208ENST00000560371 LINC01554Q52M75 96 aa8.96□□□□□ -0.98
TRAF3-208ENST00000560371 UNC80Q8N2C7 3258 aa8.96□□□□□ -0.98
TRAF3-208ENST00000560371 TM2D3Q9BRN9 247 aa8.95□□□□□ -0.98
TRAF3-208ENST00000560371 TRBV7-4A0A0J9YYF1 115 aa8.95□□□□□ -0.98
TRAF3-208ENST00000560371 FRYLO94915 3013 aa8.94□□□□□ -0.98
TRAF3-208ENST00000560371 CRIPTQ9P021 101 aa8.94□□□□□ -0.98
TRAF3-208ENST00000560371 A0A087WTM6 91 aa8.93□□□□□ -0.98
TRAF3-208ENST00000560371 CDH23Q9H251 3354 aa8.93□□□□□ -0.98
TRAF3-208ENST00000560371 PRR34Q9NV39 138 aa8.93□□□□□ -0.98
TRAF3-208ENST00000560371 FREM2Q5SZK8 3169 aa8.93□□□□□ -0.98
TRAF3-208ENST00000560371 CDIP1Q9H305 208 aa8.93□□□□□ -0.98
TRAF3-208ENST00000560371 GIG44P09565 113 aaPredicted RBP8.92□□□□□ -0.98
TRAF3-208ENST00000560371 C9orf92A6NGG3 77 aa8.92□□□□□ -0.98
TRAF3-208ENST00000560371 SMR3BP02814 79 aaPredicted RBP8.92□□□□□ -0.98
TRAF3-208ENST00000560371 ZNF861PO60384 105 aa8.92□□□□□ -0.98
TRAF3-208ENST00000560371 IGLV1-50A0A075B6I6 118 aa8.91□□□□□ -0.98
TRAF3-208ENST00000560371 KCNQ1DNQ9H478 68 aa8.91□□□□□ -0.98
TRAF3-208ENST00000560371 LINC00304Q8N9R0 145 aa8.9□□□□□ -0.98
TRAF3-208ENST00000560371 H3BPC8 53 aa8.9□□□□□ -0.98
TRAF3-208ENST00000560371 SMCPP49901 116 aaPredicted RBP8.9□□□□□ -0.98
TRAF3-208ENST00000560371 KRTAP1-3Q8IUG1 177 aa8.9□□□□□ -0.98
TRAF3-208ENST00000560371 C15orf56Q8N910 161 aa8.9□□□□□ -0.99
TRAF3-208ENST00000560371 STAB2Q8WWQ8 2551 aa8.9□□□□□ -0.99
TRAF3-208ENST00000560371 A8MWP4 228 aa8.89□□□□□ -0.99
TRAF3-208ENST00000560371 C9orf163Q8N9P6 203 aa8.88□□□□□ -0.99
TRAF3-208ENST00000560371 LINC00336Q6ZUF6 198 aa8.88□□□□□ -0.99
TRAF3-208ENST00000560371 C9orf129Q5T035 196 aaKnown RBP8.88□□□□□ -0.99
TRAF3-208ENST00000560371 LINC01600Q96MT4 127 aa8.87□□□□□ -0.99
TRAF3-208ENST00000560371 UBR5O95071 2799 aaPredicted RBP8.87□□□□□ -0.99
TRAF3-208ENST00000560371 LITAFQ99732 161 aa8.85□□□□□ -0.99
TRAF3-208ENST00000560371 MRPL34Q9BQ48 92 aaKnown RBP8.84□□□□□ -0.99
TRAF3-208ENST00000560371 IGSF10Q6WRI0 2623 aa8.84□□□□□ -0.99
TRAF3-208ENST00000560371 LINC00528Q8N1L1 170 aa8.84□□□□□ -0.99
TRAF3-208ENST00000560371 PRO0461Q9UI25 63 aa8.83□□□□□ -1
TRAF3-208ENST00000560371 LINC00612Q8N6U2 182 aa8.83□□□□□ -1
TRAF3-208ENST00000560371 LAMA1P25391 3075 aa8.83□□□□□ -1
TRAF3-208ENST00000560371 LOC101927531A0A1B0GV80 90 aa8.83□□□□□ -1
TRAF3-208ENST00000560371 KRTAP1-1Q07627 177 aa8.83□□□□□ -1
TRAF3-208ENST00000560371 C4orf26Q17RF5 130 aa8.83□□□□□ -1
TRAF3-208ENST00000560371 K7EQZ3 153 aa8.82□□□□□ -1
TRAF3-208ENST00000560371 A0A0D9SG42 100 aa8.82□□□□□ -1
TRAF3-208ENST00000560371 NBEAL2Q6ZNJ1 2754 aa8.81□□□□□ -1
TRAF3-208ENST00000560371 IGFL1Q6UW32 110 aa8.81□□□□□ -1
TRAF3-208ENST00000560371 IGLV5-37A0A075B6J1 123 aa8.8□□□□□ -1
TRAF3-208ENST00000560371 TLX1NBP0CAT3 122 aa8.8□□□□□ -1
TRAF3-208ENST00000560371 OBSCN-AS1Q96MR7 158 aa8.8□□□□□ -1
TRAF3-208ENST00000560371 PSORS1C2Q9UIG4 136 aa8.79□□□□□ -1
TRAF3-208ENST00000560371 KMT2BQ9UMN6 2715 aaPredicted RBP8.79□□□□□ -1
TRAF3-208ENST00000560371 IGLV7-43P04211 117 aa8.78□□□□□ -1
TRAF3-208ENST00000560371 PLA2G2DQ9UNK4 145 aa8.78□□□□□ -1
TRAF3-208ENST00000560371 Q8N377 158 aa8.78□□□□□ -1
TRAF3-208ENST00000560371 DSCR10P59022 87 aa8.77□□□□□ -1
TRAF3-208ENST00000560371 DMXL2Q8TDJ6 3036 aa8.77□□□□□ -1.01
TRAF3-208ENST00000560371 ZNF575Q86XF7 245 aa8.77□□□□□ -1.01
TRAF3-208ENST00000560371 ANAPC11Q9NYG5 84 aa8.77□□□□□ -1.01
TRAF3-208ENST00000560371 RBM12B-AS1Q9P1G2 102 aa8.76□□□□□ -1.01
TRAF3-208ENST00000560371 PRO0628Q9UI54 55 aa8.76□□□□□ -1.01
TRAF3-208ENST00000560371 A0A1W2PNN7 141 aa8.75□□□□□ -1.01
TRAF3-208ENST00000560371 EIF4EBP3O60516 100 aaPredicted RBP8.74□□□□□ -1.01
TRAF3-208ENST00000560371 REV3LO60673 3130 aa8.74□□□□□ -1.01
TRAF3-208ENST00000560371 CNBPP62633 177 aaKnown RBP8.74□□□□□ -1.01
TRAF3-208ENST00000560371 PRR15Q8IV56 129 aa8.74□□□□□ -1.01
TRAF3-208ENST00000560371 KALRNO60229 2985 aa8.73□□□□□ -1.01
TRAF3-208ENST00000560371 M0R2T5 61 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms