RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 MUC2Q02817 5179 aa7.15□□□□□ -1.26
SNX1-209ENST00000559961 ZNF73O43830 326 aaPredicted RBP7.15□□□□□ -1.26
SNX1-209ENST00000559961 IGLV6-57P01721 117 aa7.15□□□□□ -1.26
SNX1-209ENST00000559961 RPS29P62273 56 aaKnown RBP7.15□□□□□ -1.26
SNX1-209ENST00000559961 A0A0J9YXY3 114 aa7.14□□□□□ -1.27
SNX1-209ENST00000559961 C5orf52A6NGY3 159 aa7.14□□□□□ -1.27
SNX1-209ENST00000559961 E9PLD3 99 aa7.14□□□□□ -1.27
SNX1-209ENST00000559961 ERC2-IT1O76042 136 aa7.14□□□□□ -1.27
SNX1-209ENST00000559961 SEC61BP60468 96 aaKnown RBP7.14□□□□□ -1.27
SNX1-209ENST00000559961 Q9BRP9 147 aa7.13□□□□□ -1.27
SNX1-209ENST00000559961 LINC00310P59036 64 aa7.12□□□□□ -1.27
SNX1-209ENST00000559961 COLCA2A8K830 154 aa7.11□□□□□ -1.27
SNX1-209ENST00000559961 SYS1-DBNDD2H3BUS1 97 aa7.11□□□□□ -1.27
SNX1-209ENST00000559961 LINC00518Q8N0U6 118 aa7.11□□□□□ -1.27
SNX1-209ENST00000559961 SPANXCQ9NY87 97 aa7.11□□□□□ -1.27
SNX1-209ENST00000559961 DHRS4-AS1Q9P1J3 65 aa7.11□□□□□ -1.27
SNX1-209ENST00000559961 KRTAP13-3Q3SY46 172 aa7.1□□□□□ -1.27
SNX1-209ENST00000559961 ADAMTSL4-AS1Q5T5F5 129 aa7.1□□□□□ -1.27
SNX1-209ENST00000559961 SLC7A5P1Q8MH63 180 aa7.1□□□□□ -1.27
SNX1-209ENST00000559961 COPS9Q8WXC6 57 aa7.1□□□□□ -1.27
SNX1-209ENST00000559961 LAMTOR3Q9UHA4 124 aa7.1□□□□□ -1.27
SNX1-209ENST00000559961 ZNF815PA8K554 130 aa7.09□□□□□ -1.27
SNX1-209ENST00000559961 TIMM17BO60830 172 aa7.09□□□□□ -1.27
SNX1-209ENST00000559961 PET117Q6UWS5 81 aa7.09□□□□□ -1.27
SNX1-209ENST00000559961 Q8N377 158 aa7.09□□□□□ -1.27
SNX1-209ENST00000559961 LINC00308Q8TCZ7 52 aa7.09□□□□□ -1.27
SNX1-209ENST00000559961 LIMD2Q9BT23 127 aa7.09□□□□□ -1.27
SNX1-209ENST00000559961 ASB16-AS1Q495Z4 193 aa7.08□□□□□ -1.28
SNX1-209ENST00000559961 SPANXDQ9BXN6 97 aa7.08□□□□□ -1.28
SNX1-209ENST00000559961 LINC01547P58512 204 aaPredicted RBP7.07□□□□□ -1.28
SNX1-209ENST00000559961 TAL2Q16559 108 aa7.07□□□□□ -1.28
SNX1-209ENST00000559961 SOSTDC1Q6X4U4 206 aa7.07□□□□□ -1.28
SNX1-209ENST00000559961 SCGB1D4Q6XE38 83 aa7.07□□□□□ -1.28
SNX1-209ENST00000559961 C20orf202A1L168 122 aa7.06□□□□□ -1.28
SNX1-209ENST00000559961 ST20-AS1Q8NBB2 130 aa7.06□□□□□ -1.28
SNX1-209ENST00000559961 COX7BP24311 80 aa7.05□□□□□ -1.28
SNX1-209ENST00000559961 LINC01545Q5VT33 79 aa7.05□□□□□ -1.28
SNX1-209ENST00000559961 HIST1H2BKO60814 126 aa7.04□□□□□ -1.28
SNX1-209ENST00000559961 HIST1H2BJP06899 126 aa7.04□□□□□ -1.28
SNX1-209ENST00000559961 HIST1H2BOP23527 126 aa7.04□□□□□ -1.28
SNX1-209ENST00000559961 HIST1H2BBP33778 126 aa7.04□□□□□ -1.28
SNX1-209ENST00000559961 AKR1D1P51857 326 aa7.04□□□□□ -1.28
SNX1-209ENST00000559961 HIST1H2BDP58876 126 aa7.04□□□□□ -1.28
SNX1-209ENST00000559961 HIST1H2BCP62807 126 aa7.04□□□□□ -1.28
SNX1-209ENST00000559961 HIST2H2BEQ16778 126 aa7.04□□□□□ -1.28
SNX1-209ENST00000559961 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.04□□□□□ -1.28
SNX1-209ENST00000559961 HIST1H2BHQ93079 126 aa7.04□□□□□ -1.28
SNX1-209ENST00000559961 HIST1H2BNQ99877 126 aa7.04□□□□□ -1.28
SNX1-209ENST00000559961 HIST1H2BMQ99879 126 aa7.04□□□□□ -1.28
SNX1-209ENST00000559961 EIF4EBP3O60516 100 aaPredicted RBP7.03□□□□□ -1.28
SNX1-209ENST00000559961 KRTDAPP60985 99 aa7.03□□□□□ -1.28
SNX1-209ENST00000559961 HRCT1Q6UXD1 115 aa7.03□□□□□ -1.28
SNX1-209ENST00000559961 DEFB105AQ8NG35 78 aa7.03□□□□□ -1.28
SNX1-209ENST00000559961 MUC17Q685J3 4493 aa7.02□□□□□ -1.29
SNX1-209ENST00000559961 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
SNX1-209ENST00000559961 C6orf99Q4VX62 202 aa7.02□□□□□ -1.29
SNX1-209ENST00000559961 FAT4Q6V0I7 4981 aa7.01□□□□□ -1.29
SNX1-209ENST00000559961 TEX49A0A1B0GTD5 131 aa7.01□□□□□ -1.29
SNX1-209ENST00000559961 A6NDN8 102 aa7.01□□□□□ -1.29
SNX1-209ENST00000559961 SPRR1BP22528 89 aa7.01□□□□□ -1.29
SNX1-209ENST00000559961 LITAFQ99732 161 aa7.01□□□□□ -1.29
SNX1-209ENST00000559961 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
SNX1-209ENST00000559961 PRO1933Q9H354 126 aa7.01□□□□□ -1.29
SNX1-209ENST00000559961 TRBV7-6A0A0J9YX20 115 aa7□□□□□ -1.29
SNX1-209ENST00000559961 C3orf79P0CE67 100 aa7□□□□□ -1.29
SNX1-209ENST00000559961 IFITM1P13164 125 aa7□□□□□ -1.29
SNX1-209ENST00000559961 ELOF1P60002 83 aaKnown RBP7□□□□□ -1.29
SNX1-209ENST00000559961 Q6ZVH6 145 aa7□□□□□ -1.29
SNX1-209ENST00000559961 A0A1B0GWB2 263 aa6.99□□□□□ -1.29
SNX1-209ENST00000559961 H7C2G1 150 aa6.99□□□□□ -1.29
SNX1-209ENST00000559961 NHP2Q9NX24 153 aaKnown RBP6.99□□□□□ -1.29
SNX1-209ENST00000559961 A4D1N5 150 aa6.98□□□□□ -1.29
SNX1-209ENST00000559961 CD164Q04900 197 aa6.98□□□□□ -1.29
SNX1-209ENST00000559961 Q1RN00 199 aa6.98□□□□□ -1.29
SNX1-209ENST00000559961 XP32Q5T750 250 aa6.98□□□□□ -1.29
SNX1-209ENST00000559961 TTTY13Q9BZ97 58 aa6.97□□□□□ -1.29
SNX1-209ENST00000559961 TRAV13-2A0A0B4J235 113 aa6.96□□□□□ -1.3
SNX1-209ENST00000559961 VAMP3Q15836 100 aa6.96□□□□□ -1.3
SNX1-209ENST00000559961 C9orf92A6NGG3 77 aa6.94□□□□□ -1.3
SNX1-209ENST00000559961 SNRPEP62304 92 aaKnown RBP6.94□□□□□ -1.3
SNX1-209ENST00000559961 HSBP1L1C9JCN9 74 aa6.93□□□□□ -1.3
SNX1-209ENST00000559961 F8WEM9 126 aa6.93□□□□□ -1.3
SNX1-209ENST00000559961 COA6Q5JTJ3 125 aaKnown RBP6.93□□□□□ -1.3
SNX1-209ENST00000559961 MUSTN1Q8IVN3 82 aa6.93□□□□□ -1.3
SNX1-209ENST00000559961 TCL1BO95988 128 aa6.92□□□□□ -1.3
SNX1-209ENST00000559961 ATOH7Q8N100 152 aa6.92□□□□□ -1.3
SNX1-209ENST00000559961 ANKRD39Q53RE8 183 aa6.9□□□□□ -1.3
SNX1-209ENST00000559961 IGLV8-61A0A075B6I0 122 aa6.89□□□□□ -1.31
SNX1-209ENST00000559961 S100A2P29034 98 aa6.89□□□□□ -1.31
SNX1-209ENST00000559961 PCOTHQ58A44 107 aa6.89□□□□□ -1.31
SNX1-209ENST00000559961 IGLV5-48A0A075B6I7 105 aa6.88□□□□□ -1.31
SNX1-209ENST00000559961 Q5XG85 94 aa6.88□□□□□ -1.31
SNX1-209ENST00000559961 PCP2Q8IVA1 136 aa6.88□□□□□ -1.31
SNX1-209ENST00000559961 SMIM11BQ8TCY0 68 aa6.87□□□□□ -1.31
SNX1-209ENST00000559961 KRTAP4-1Q9BYQ7 146 aa6.87□□□□□ -1.31
SNX1-209ENST00000559961 SNCGO76070 127 aa6.85□□□□□ -1.31
SNX1-209ENST00000559961 SMIM29Q86T20 159 aa6.85□□□□□ -1.31
SNX1-209ENST00000559961 hADV29S1A0JD25 119 aa6.84□□□□□ -1.31
SNX1-209ENST00000559961 C1orf195Q5TG92 126 aa6.84□□□□□ -1.31
SNX1-209ENST00000559961 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms