RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 KRTAP4-16G5E9R7 235 aaPredicted RBP12.18□□□□□ -0.46
TSPAN3-207ENST00000559494 KRTAP10-8P60410 259 aa12.18□□□□□ -0.46
TSPAN3-207ENST00000559494 SLC25A34Q6PIV7 304 aa12.18□□□□□ -0.46
TSPAN3-207ENST00000559494 PPDPFQ9H3Y8 114 aa12.18□□□□□ -0.46
TSPAN3-207ENST00000559494 LINC00337Q8N6G1 96 aa12.17□□□□□ -0.46
TSPAN3-207ENST00000559494 COPS9Q8WXC6 57 aa12.16□□□□□ -0.46
TSPAN3-207ENST00000559494 S100A12P80511 92 aa12.15□□□□□ -0.46
TSPAN3-207ENST00000559494 C2orf91Q6ZV80 131 aa12.15□□□□□ -0.46
TSPAN3-207ENST00000559494 LINC00518Q8N0U6 118 aa12.15□□□□□ -0.46
TSPAN3-207ENST00000559494 OR13C6PQ8NH95 151 aa12.14□□□□□ -0.47
TSPAN3-207ENST00000559494 ETDCA0A1B0GVM5 59 aa12.13□□□□□ -0.47
TSPAN3-207ENST00000559494 TRAV23DV6A0A075B6W5 121 aa12.12□□□□□ -0.47
TSPAN3-207ENST00000559494 SMIM6P0DI80 62 aa12.12□□□□□ -0.47
TSPAN3-207ENST00000559494 PRR26Q8N8Z3 221 aa12.12□□□□□ -0.47
TSPAN3-207ENST00000559494 HIGD1BQ9P298 99 aa12.12□□□□□ -0.47
TSPAN3-207ENST00000559494 B5MCH6 92 aa12.11□□□□□ -0.47
TSPAN3-207ENST00000559494 HIGD2AQ9BW72 106 aa12.11□□□□□ -0.47
TSPAN3-207ENST00000559494 HIST1H4GQ99525 98 aa12.11□□□□□ -0.47
TSPAN3-207ENST00000559494 ZNF73O43830 326 aaPredicted RBP12.09□□□□□ -0.47
TSPAN3-207ENST00000559494 ANAPC11Q9NYG5 84 aa12.09□□□□□ -0.47
TSPAN3-207ENST00000559494 A4D1N5 150 aa12.07□□□□□ -0.48
TSPAN3-207ENST00000559494 SMCR5Q8TEV8 140 aa12.07□□□□□ -0.48
TSPAN3-207ENST00000559494 CBY1Q9Y3M2 126 aa12.07□□□□□ -0.48
TSPAN3-207ENST00000559494 PRO1933Q9H354 126 aa12.06□□□□□ -0.48
TSPAN3-207ENST00000559494 UQCR10Q9UDW1 63 aa12.06□□□□□ -0.48
TSPAN3-207ENST00000559494 Q6ZRX8 168 aa12.05□□□□□ -0.48
TSPAN3-207ENST00000559494 Q9BRP9 147 aa12.05□□□□□ -0.48
TSPAN3-207ENST00000559494 A6NDN8 102 aa12.04□□□□□ -0.48
TSPAN3-207ENST00000559494 A0A087X002 238 aa12.03□□□□□ -0.48
TSPAN3-207ENST00000559494 ERC2-IT1O76042 136 aa12.03□□□□□ -0.48
TSPAN3-207ENST00000559494 TRAV13-2A0A0B4J235 113 aa12.02□□□□□ -0.49
TSPAN3-207ENST00000559494 C12orf57Q99622 126 aa12.02□□□□□ -0.49
TSPAN3-207ENST00000559494 TAL2Q16559 108 aa12.01□□□□□ -0.49
TSPAN3-207ENST00000559494 SPRR4Q96PI1 79 aa12.01□□□□□ -0.49
TSPAN3-207ENST00000559494 CRYGAP11844 174 aa12□□□□□ -0.49
TSPAN3-207ENST00000559494 HINT1P49773 126 aaPredicted RBP12□□□□□ -0.49
TSPAN3-207ENST00000559494 C6orf99Q4VX62 202 aa12□□□□□ -0.49
TSPAN3-207ENST00000559494 RPL13AP40429 203 aaKnown RBP11.99□□□□□ -0.49
TSPAN3-207ENST00000559494 FAM229BQ4G0N7 80 aa11.99□□□□□ -0.49
TSPAN3-207ENST00000559494 CEND1Q8N111 149 aa11.99□□□□□ -0.49
TSPAN3-207ENST00000559494 KRTAP13-2Q52LG2 175 aa11.98□□□□□ -0.49
TSPAN3-207ENST00000559494 FXYD2P54710 66 aa11.96□□□□□ -0.49
TSPAN3-207ENST00000559494 HSD52Q0P140 79 aa11.96□□□□□ -0.49
TSPAN3-207ENST00000559494 SMIM11BQ8TCY0 68 aa11.96□□□□□ -0.49
TSPAN3-207ENST00000559494 ZNF706Q9Y5V0 76 aaPredicted RBP11.96□□□□□ -0.49
TSPAN3-207ENST00000559494 COX7BP24311 80 aa11.95□□□□□ -0.5
TSPAN3-207ENST00000559494 ELOF1P60002 83 aaKnown RBP11.95□□□□□ -0.5
TSPAN3-207ENST00000559494 CFC1BP0CG36 223 aa11.94□□□□□ -0.5
TSPAN3-207ENST00000559494 CFC1P0CG37 223 aa11.94□□□□□ -0.5
TSPAN3-207ENST00000559494 TRBV7-6A0A0J9YX20 115 aa11.93□□□□□ -0.5
TSPAN3-207ENST00000559494 TYMSOSQ8TAI1 123 aa11.93□□□□□ -0.5
TSPAN3-207ENST00000559494 LINC00483Q53H64 154 aa11.91□□□□□ -0.5
TSPAN3-207ENST00000559494 GAGE2AQ6NT46 116 aa11.91□□□□□ -0.5
TSPAN3-207ENST00000559494 DHRS4-AS1Q9P1J3 65 aa11.91□□□□□ -0.5
TSPAN3-207ENST00000559494 HMCN2Q8NDA2 5059 aa11.9□□□□□ -0.5
TSPAN3-207ENST00000559494 C3orf22Q8N5N4 141 aa11.9□□□□□ -0.5
TSPAN3-207ENST00000559494 ST20-AS1Q8NBB2 130 aa11.9□□□□□ -0.5
TSPAN3-207ENST00000559494 A0A0B4J2C4 111 aa11.89□□□□□ -0.51
TSPAN3-207ENST00000559494 A0A1B0GWB2 263 aa11.89□□□□□ -0.51
TSPAN3-207ENST00000559494 RAB37Q96AX2 223 aa11.88□□□□□ -0.51
TSPAN3-207ENST00000559494 TMEM238LA0A1B0GVL6 79 aa11.87□□□□□ -0.51
TSPAN3-207ENST00000559494 A6NJY4 79 aa11.87□□□□□ -0.51
TSPAN3-207ENST00000559494 TSTD3H0UI37 97 aa11.86□□□□□ -0.51
TSPAN3-207ENST00000559494 CTAG1AP78358 180 aa11.86□□□□□ -0.51
TSPAN3-207ENST00000559494 H7C2G1 150 aa11.86□□□□□ -0.51
TSPAN3-207ENST00000559494 BVES-AS1Q5T3Y7 98 aa11.86□□□□□ -0.51
TSPAN3-207ENST00000559494 NHP2Q9NX24 153 aaKnown RBP11.85□□□□□ -0.51
TSPAN3-207ENST00000559494 K7ERJ3 54 aa11.84□□□□□ -0.51
TSPAN3-207ENST00000559494 VAMP3Q15836 100 aa11.83□□□□□ -0.52
TSPAN3-207ENST00000559494 PRO1854Q9UHT4 67 aa11.83□□□□□ -0.52
TSPAN3-207ENST00000559494 TSPAN13O95857 204 aa11.8□□□□□ -0.52
TSPAN3-207ENST00000559494 SPRR1BP22528 89 aa11.8□□□□□ -0.52
TSPAN3-207ENST00000559494 LINC00575Q6W349 94 aa11.79□□□□□ -0.52
TSPAN3-207ENST00000559494 LINC00304Q8N9R0 145 aa11.79□□□□□ -0.52
TSPAN3-207ENST00000559494 IGLV9-49A0A0B4J1Y8 123 aa11.78□□□□□ -0.52
TSPAN3-207ENST00000559494 Q1RN00 199 aa11.77□□□□□ -0.53
TSPAN3-207ENST00000559494 DEFB105AQ8NG35 78 aa11.77□□□□□ -0.53
TSPAN3-207ENST00000559494 LINC01547P58512 204 aaPredicted RBP11.76□□□□□ -0.53
TSPAN3-207ENST00000559494 MOBPQ13875 183 aa11.76□□□□□ -0.53
TSPAN3-207ENST00000559494 M0R143 59 aa11.75□□□□□ -0.53
TSPAN3-207ENST00000559494 SLC25A20O43772 301 aa11.75□□□□□ -0.53
TSPAN3-207ENST00000559494 SSBP3-AS1Q7Z2R9 100 aa11.74□□□□□ -0.53
TSPAN3-207ENST00000559494 Q8NBF4 154 aa11.74□□□□□ -0.53
TSPAN3-207ENST00000559494 IGLV5-48A0A075B6I7 105 aa11.73□□□□□ -0.53
TSPAN3-207ENST00000559494 TEX49A0A1B0GTD5 131 aa11.73□□□□□ -0.53
TSPAN3-207ENST00000559494 hADV29S1A0JD25 119 aa11.73□□□□□ -0.53
TSPAN3-207ENST00000559494 TRIAP1O43715 76 aa11.7□□□□□ -0.54
TSPAN3-207ENST00000559494 SPAG11AQ6PDA7 123 aa11.7□□□□□ -0.54
TSPAN3-207ENST00000559494 SMIM29Q86T20 159 aa11.7□□□□□ -0.54
TSPAN3-207ENST00000559494 Q8N377 158 aa11.7□□□□□ -0.54
TSPAN3-207ENST00000559494 LAMTOR3Q9UHA4 124 aa11.7□□□□□ -0.54
TSPAN3-207ENST00000559494 C9orf153Q5TBE3 101 aa11.69□□□□□ -0.54
TSPAN3-207ENST00000559494 H0YGX0 51 aa11.68□□□□□ -0.54
TSPAN3-207ENST00000559494 Q6ZQY7 126 aa11.68□□□□□ -0.54
TSPAN3-207ENST00000559494 BATFQ16520 125 aa11.67□□□□□ -0.54
TSPAN3-207ENST00000559494 C4orf48Q5BLP8 95 aa11.67□□□□□ -0.54
TSPAN3-207ENST00000559494 FAM218AQ96MZ4 157 aa11.67□□□□□ -0.54
TSPAN3-207ENST00000559494 PSMB2P49721 201 aa11.65□□□□□ -0.54
TSPAN3-207ENST00000559494 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.64□□□□□ -0.55
TSPAN3-207ENST00000559494 LRP2P98164 4655 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms