RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 LY6G6CO95867 125 aa1.12□□□□□ -2.23
SPG11-206ENST00000558093 DEFB103AP81534 67 aa1.12□□□□□ -2.23
SPG11-206ENST00000558093 LINC01546A6NGU7 62 aa1.11□□□□□ -2.23
SPG11-206ENST00000558093 CPSF4LA6NMK7 179 aaKnown RBP1.11□□□□□ -2.23
SPG11-206ENST00000558093 FXYD6P3P58550 94 aa1.11□□□□□ -2.23
SPG11-206ENST00000558093 KCNQ1DNQ9H478 68 aa1.11□□□□□ -2.23
SPG11-206ENST00000558093 SAMD9LQ8IVG5 1584 aa1.11□□□□□ -2.23
SPG11-206ENST00000558093 DUOX1Q9NRD9 1551 aa1.11□□□□□ -2.23
SPG11-206ENST00000558093 ZDBF2Q9HCK1 2354 aa1.11□□□□□ -2.23
SPG11-206ENST00000558093 TNRC6CQ9HCJ0 1690 aaKnown RBP1.1□□□□□ -2.23
SPG11-206ENST00000558093 DEFB114Q30KQ6 69 aa1.1□□□□□ -2.23
SPG11-206ENST00000558093 PCOTHQ58A44 107 aa1.1□□□□□ -2.23
SPG11-206ENST00000558093 C10orf99Q6UWK7 81 aa1.1□□□□□ -2.23
SPG11-206ENST00000558093 CRIPTQ9P021 101 aa1.1□□□□□ -2.23
SPG11-206ENST00000558093 SPTY2D1-AS1A0A0U1RR47 76 aa1.09□□□□□ -2.23
SPG11-206ENST00000558093 CRIP1P50238 77 aa1.09□□□□□ -2.23
SPG11-206ENST00000558093 RPL38P63173 70 aaKnown RBP1.09□□□□□ -2.23
SPG11-206ENST00000558093 COL6A6A6NMZ7 2263 aa1.09□□□□□ -2.24
SPG11-206ENST00000558093 DOPEY2Q9Y3R5 2298 aa1.09□□□□□ -2.24
SPG11-206ENST00000558093 CNOT1A5YKK6 2376 aaKnown RBP1.08□□□□□ -2.24
SPG11-206ENST00000558093 H0YGX0 51 aa1.08□□□□□ -2.24
SPG11-206ENST00000558093 PIN1P1O15428 100 aa1.08□□□□□ -2.24
SPG11-206ENST00000558093 ALMS1Q8TCU4 4167 aa1.07□□□□□ -2.24
SPG11-206ENST00000558093 SPINK13Q1W4C9 94 aa1.07□□□□□ -2.24
SPG11-206ENST00000558093 UNQ6190/PRO20217Q6UXQ8 127 aa1.07□□□□□ -2.24
SPG11-206ENST00000558093 FLG2Q5D862 2391 aaPredicted RBP1.07□□□□□ -2.24
SPG11-206ENST00000558093 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.06□□□□□ -2.24
SPG11-206ENST00000558093 DEFB131BA0A096LNP1 70 aa1.06□□□□□ -2.24
SPG11-206ENST00000558093 LOC730098B7Z3J9 87 aa1.06□□□□□ -2.24
SPG11-206ENST00000558093 ANGP03950 147 aaKnown RBP1.06□□□□□ -2.24
SPG11-206ENST00000558093 RPL37P61927 97 aaKnown RBP1.06□□□□□ -2.24
SPG11-206ENST00000558093 PRB3Q04118 309 aaPredicted RBP1.06□□□□□ -2.24
SPG11-206ENST00000558093 UBE2DNLQ8IWF7 75 aa1.06□□□□□ -2.24
SPG11-206ENST00000558093 CDKN2A-AS1Q9UH64 79 aa1.06□□□□□ -2.24
SPG11-206ENST00000558093 CACNA1EQ15878 2313 aa1.06□□□□□ -2.24
SPG11-206ENST00000558093 NAV3Q8IVL0 2385 aa1.06□□□□□ -2.24
SPG11-206ENST00000558093 CACNA1BQ00975 2339 aa1.05□□□□□ -2.24
SPG11-206ENST00000558093 MRPL33O75394 65 aaKnown RBP1.05□□□□□ -2.24
SPG11-206ENST00000558093 LINC00158P58513 81 aa1.05□□□□□ -2.24
SPG11-206ENST00000558093 TFF3Q07654 80 aa1.05□□□□□ -2.24
SPG11-206ENST00000558093 LINC00575Q6W349 94 aa1.05□□□□□ -2.24
SPG11-206ENST00000558093 PRO3102Q9H379 93 aa1.05□□□□□ -2.24
SPG11-206ENST00000558093 TMEM167BQ9NRX6 74 aa1.05□□□□□ -2.24
SPG11-206ENST00000558093 PLCE1Q9P212 2302 aa1.05□□□□□ -2.24
SPG11-206ENST00000558093 TENM1Q9UKZ4 2725 aa1.04□□□□□ -2.24
SPG11-206ENST00000558093 LINC00308Q8TCZ7 52 aa1.04□□□□□ -2.24
SPG11-206ENST00000558093 Q8IZM0 81 aa1.03□□□□□ -2.24
SPG11-206ENST00000558093 FCGBPQ9Y6R7 5405 aaPredicted RBP1.02□□□□□ -2.25
SPG11-206ENST00000558093 PTPRQQ9UMZ3 2332 aa1.01□□□□□ -2.25
SPG11-206ENST00000558093 I3L2K1 104 aa1.01□□□□□ -2.25
SPG11-206ENST00000558093 K7EQZ3 153 aa1.01□□□□□ -2.25
SPG11-206ENST00000558093 Q6ZSA8 131 aa1.01□□□□□ -2.25
SPG11-206ENST00000558093 MRPL34Q9BQ48 92 aaKnown RBP1.01□□□□□ -2.25
SPG11-206ENST00000558093 C10orf95Q9H7T3 257 aa1.01□□□□□ -2.25
SPG11-206ENST00000558093 TP53AIP1Q9HCN2 124 aa1.01□□□□□ -2.25
SPG11-206ENST00000558093 FAM208BQ5VWN6 2430 aa1□□□□□ -2.25
SPG11-206ENST00000558093 HELZ2Q9BYK8 2649 aaKnown RBP1□□□□□ -2.25
SPG11-206ENST00000558093 LYNX1P0DP58 116 aa1□□□□□ -2.25
SPG11-206ENST00000558093 USMG5Q96IX5 58 aa1□□□□□ -2.25
SPG11-206ENST00000558093 SMIM2Q9BVW6 85 aa1□□□□□ -2.25
SPG11-206ENST00000558093 JMJD1CQ15652 2540 aa0.99□□□□□ -2.25
SPG11-206ENST00000558093 CNTRLQ7Z7A1 2325 aa0.99□□□□□ -2.25
SPG11-206ENST00000558093 PIEZO2Q9H5I5 2752 aa0.99□□□□□ -2.25
SPG11-206ENST00000558093 NDUFA1O15239 70 aa0.99□□□□□ -2.25
SPG11-206ENST00000558093 IAPPP10997 89 aa0.99□□□□□ -2.25
SPG11-206ENST00000558093 PIGYQ3MUY2 71 aa0.99□□□□□ -2.25
SPG11-206ENST00000558093 LELP1Q5T871 98 aa0.99□□□□□ -2.25
SPG11-206ENST00000558093 MINOS1Q5TGZ0 78 aa0.99□□□□□ -2.25
SPG11-206ENST00000558093 SRCAPQ6ZRS2 3230 aa0.99□□□□□ -2.25
SPG11-206ENST00000558093 RP1L1Q8IWN7 2480 aaPredicted RBP0.98□□□□□ -2.25
SPG11-206ENST00000558093 H0YAA0 97 aa0.98□□□□□ -2.25
SPG11-206ENST00000558093 USF3Q68DE3 2245 aa0.98□□□□□ -2.25
SPG11-206ENST00000558093 PTPRZ1P23471 2315 aaPredicted RBP0.98□□□□□ -2.25
SPG11-206ENST00000558093 PDE4DIPQ5VU43 2346 aa0.98□□□□□ -2.25
SPG11-206ENST00000558093 LYNX1G3V0Z9 82 aa0.97□□□□□ -2.25
SPG11-206ENST00000558093 K7EIL1 84 aa0.97□□□□□ -2.25
SPG11-206ENST00000558093 COX6A2Q02221 97 aa0.97□□□□□ -2.25
SPG11-206ENST00000558093 DEFB123Q8N688 67 aa0.97□□□□□ -2.25
SPG11-206ENST00000558093 C6orf48Q9UBA6 75 aa0.97□□□□□ -2.25
SPG11-206ENST00000558093 KNL1Q8NG31 2342 aa0.97□□□□□ -2.25
SPG11-206ENST00000558093 CCL22O00626 93 aa0.96□□□□□ -2.26
SPG11-206ENST00000558093 COX6B2Q6YFQ2 88 aa0.96□□□□□ -2.26
SPG11-206ENST00000558093 WFDC13Q8IUB5 93 aa0.95□□□□□ -2.26
SPG11-206ENST00000558093 DEFB119Q8N690 84 aa0.95□□□□□ -2.26
SPG11-206ENST00000558093 CNFNQ9BYD5 112 aa0.95□□□□□ -2.26
SPG11-206ENST00000558093 PRO0255Q9UI72 69 aa0.95□□□□□ -2.26
SPG11-206ENST00000558093 APLNQ9ULZ1 77 aa0.95□□□□□ -2.26
SPG11-206ENST00000558093 PKDREJQ9NTG1 2253 aa0.95□□□□□ -2.26
SPG11-206ENST00000558093 ASH1LQ9NR48 2969 aaKnown RBP0.94□□□□□ -2.26
SPG11-206ENST00000558093 ARHGAP5-AS1Q96IT6 56 aa0.94□□□□□ -2.26
SPG11-206ENST00000558093 IGF2RP11717 2491 aa0.94□□□□□ -2.26
SPG11-206ENST00000558093 ROS1P08922 2347 aa0.93□□□□□ -2.26
SPG11-206ENST00000558093 RPS27P42677 84 aaKnown RBP0.93□□□□□ -2.26
SPG11-206ENST00000558093 H1FX-AS1Q4G0G2 97 aa0.93□□□□□ -2.26
SPG11-206ENST00000558093 RPS27LQ71UM5 84 aaKnown RBP0.93□□□□□ -2.26
SPG11-206ENST00000558093 WFDC10BQ8IUB3 73 aa0.93□□□□□ -2.26
SPG11-206ENST00000558093 TTTY10Q9BZA0 68 aa0.93□□□□□ -2.26
SPG11-206ENST00000558093 C2CD3Q4AC94 2353 aa0.92□□□□□ -2.26
SPG11-206ENST00000558093 REV3LO60673 3130 aa0.92□□□□□ -2.26
SPG11-206ENST00000558093 DEFB130BP0DP73 79 aa0.92□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms