RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 KRTAP9-2Q9BYQ4 174 aa7.69□□□□□ -1.18
SNRPA1-204ENST00000558020 ERC2-IT1O76042 136 aa7.68□□□□□ -1.18
SNRPA1-204ENST00000558020 IGLV6-57P01721 117 aa7.68□□□□□ -1.18
SNRPA1-204ENST00000558020 LINC00310P59036 64 aa7.68□□□□□ -1.18
SNRPA1-204ENST00000558020 SEC61BP60468 96 aaKnown RBP7.68□□□□□ -1.18
SNRPA1-204ENST00000558020 FAT4Q6V0I7 4981 aa7.68□□□□□ -1.18
SNRPA1-204ENST00000558020 TRAV23DV6A0A075B6W5 121 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 HIST1H2BKO60814 126 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 HIST1H2BJP06899 126 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 HIST1H2BOP23527 126 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 HIST1H2BBP33778 126 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 HIST1H2BDP58876 126 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 HIST1H2BCP62807 126 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 HIST2H2BEQ16778 126 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 ASB16-AS1Q495Z4 193 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 HIST1H2BHQ93079 126 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 HIST1H2BNQ99877 126 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 HIST1H2BMQ99879 126 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 Q9BRP9 147 aa7.67□□□□□ -1.18
SNRPA1-204ENST00000558020 C5orf52A6NGY3 159 aa7.66□□□□□ -1.18
SNRPA1-204ENST00000558020 PMCHL2Q9BQD1 86 aa7.66□□□□□ -1.18
SNRPA1-204ENST00000558020 ZNF73O43830 326 aaPredicted RBP7.65□□□□□ -1.18
SNRPA1-204ENST00000558020 Q8N377 158 aa7.65□□□□□ -1.18
SNRPA1-204ENST00000558020 C9orf153Q5TBE3 101 aa7.64□□□□□ -1.19
SNRPA1-204ENST00000558020 MUC17Q685J3 4493 aa7.63□□□□□ -1.19
SNRPA1-204ENST00000558020 A0A0J9YXY3 114 aa7.63□□□□□ -1.19
SNRPA1-204ENST00000558020 E9PLD3 99 aa7.62□□□□□ -1.19
SNRPA1-204ENST00000558020 LINC01547P58512 204 aaPredicted RBP7.62□□□□□ -1.19
SNRPA1-204ENST00000558020 NPC2P61916 151 aa7.62□□□□□ -1.19
SNRPA1-204ENST00000558020 ADAMTSL4-AS1Q5T5F5 129 aa7.62□□□□□ -1.19
SNRPA1-204ENST00000558020 SLC25A34Q6PIV7 304 aa7.62□□□□□ -1.19
SNRPA1-204ENST00000558020 SOSTDC1Q6X4U4 206 aa7.6□□□□□ -1.19
SNRPA1-204ENST00000558020 OR13C6PQ8NH95 151 aa7.6□□□□□ -1.19
SNRPA1-204ENST00000558020 SPANXCQ9NY87 97 aa7.6□□□□□ -1.19
SNRPA1-204ENST00000558020 DHRS4-AS1Q9P1J3 65 aa7.6□□□□□ -1.19
SNRPA1-204ENST00000558020 COA6Q5JTJ3 125 aaKnown RBP7.59□□□□□ -1.19
SNRPA1-204ENST00000558020 TIMM17BO60830 172 aa7.58□□□□□ -1.2
SNRPA1-204ENST00000558020 ST20-AS1Q8NBB2 130 aa7.58□□□□□ -1.2
SNRPA1-204ENST00000558020 LINC00308Q8TCZ7 52 aa7.58□□□□□ -1.2
SNRPA1-204ENST00000558020 SYS1-DBNDD2H3BUS1 97 aa7.57□□□□□ -1.2
SNRPA1-204ENST00000558020 EIF4EBP3O60516 100 aaPredicted RBP7.57□□□□□ -1.2
SNRPA1-204ENST00000558020 LINC00518Q8N0U6 118 aa7.57□□□□□ -1.2
SNRPA1-204ENST00000558020 LIMD2Q9BT23 127 aa7.57□□□□□ -1.2
SNRPA1-204ENST00000558020 LAMTOR3Q9UHA4 124 aa7.57□□□□□ -1.2
SNRPA1-204ENST00000558020 SPANXDQ9BXN6 97 aa7.56□□□□□ -1.2
SNRPA1-204ENST00000558020 SPRR1BP22528 89 aa7.55□□□□□ -1.2
SNRPA1-204ENST00000558020 XP32Q5T750 250 aa7.55□□□□□ -1.2
SNRPA1-204ENST00000558020 PET117Q6UWS5 81 aa7.55□□□□□ -1.2
SNRPA1-204ENST00000558020 ZNF815PA8K554 130 aa7.54□□□□□ -1.2
SNRPA1-204ENST00000558020 C20orf202A1L168 122 aa7.53□□□□□ -1.2
SNRPA1-204ENST00000558020 S100A6P06703 90 aa7.53□□□□□ -1.2
SNRPA1-204ENST00000558020 KRTDAPP60985 99 aa7.53□□□□□ -1.2
SNRPA1-204ENST00000558020 TAL2Q16559 108 aa7.53□□□□□ -1.2
SNRPA1-204ENST00000558020 COPS9Q8WXC6 57 aa7.53□□□□□ -1.2
SNRPA1-204ENST00000558020 LITAFQ99732 161 aa7.53□□□□□ -1.2
SNRPA1-204ENST00000558020 C3orf79P0CE67 100 aa7.52□□□□□ -1.21
SNRPA1-204ENST00000558020 COX7BP24311 80 aa7.52□□□□□ -1.21
SNRPA1-204ENST00000558020 S100A2P29034 98 aa7.52□□□□□ -1.21
SNRPA1-204ENST00000558020 LINC01545Q5VT33 79 aa7.52□□□□□ -1.21
SNRPA1-204ENST00000558020 HRCT1Q6UXD1 115 aa7.51□□□□□ -1.21
SNRPA1-204ENST00000558020 AKR1D1P51857 326 aa7.5□□□□□ -1.21
SNRPA1-204ENST00000558020 ELOF1P60002 83 aaKnown RBP7.5□□□□□ -1.21
SNRPA1-204ENST00000558020 C6orf99Q4VX62 202 aa7.5□□□□□ -1.21
SNRPA1-204ENST00000558020 KRTAP4-1Q9BYQ7 146 aa7.5□□□□□ -1.21
SNRPA1-204ENST00000558020 PRO1933Q9H354 126 aa7.5□□□□□ -1.21
SNRPA1-204ENST00000558020 TRBV7-6A0A0J9YX20 115 aa7.49□□□□□ -1.21
SNRPA1-204ENST00000558020 KRTAP9-6A0A140TA67 174 aa7.49□□□□□ -1.21
SNRPA1-204ENST00000558020 TEX49A0A1B0GTD5 131 aa7.49□□□□□ -1.21
SNRPA1-204ENST00000558020 CD164Q04900 197 aa7.49□□□□□ -1.21
SNRPA1-204ENST00000558020 SCGB1D4Q6XE38 83 aa7.49□□□□□ -1.21
SNRPA1-204ENST00000558020 DEFB105AQ8NG35 78 aa7.49□□□□□ -1.21
SNRPA1-204ENST00000558020 H7C2G1 150 aa7.47□□□□□ -1.21
SNRPA1-204ENST00000558020 HIST3H2BBQ8N257 126 aa7.47□□□□□ -1.21
SNRPA1-204ENST00000558020 IFITM1P13164 125 aa7.46□□□□□ -1.22
SNRPA1-204ENST00000558020 Q1RN00 199 aa7.46□□□□□ -1.22
SNRPA1-204ENST00000558020 A0A1B0GWB2 263 aa7.45□□□□□ -1.22
SNRPA1-204ENST00000558020 A6NDN8 102 aa7.45□□□□□ -1.22
SNRPA1-204ENST00000558020 Q6ZVH6 145 aa7.45□□□□□ -1.22
SNRPA1-204ENST00000558020 HIST1H2BLQ99880 126 aa7.45□□□□□ -1.22
SNRPA1-204ENST00000558020 A4D1N5 150 aa7.44□□□□□ -1.22
SNRPA1-204ENST00000558020 TTTY13Q9BZ97 58 aa7.44□□□□□ -1.22
SNRPA1-204ENST00000558020 C9orf92A6NGG3 77 aa7.43□□□□□ -1.22
SNRPA1-204ENST00000558020 NHP2Q9NX24 153 aaKnown RBP7.43□□□□□ -1.22
SNRPA1-204ENST00000558020 IGLV8-61A0A075B6I0 122 aa7.42□□□□□ -1.22
SNRPA1-204ENST00000558020 SNRPEP62304 92 aaKnown RBP7.42□□□□□ -1.22
SNRPA1-204ENST00000558020 PCOTHQ58A44 107 aa7.42□□□□□ -1.22
SNRPA1-204ENST00000558020 Q5XG85 94 aa7.42□□□□□ -1.22
SNRPA1-204ENST00000558020 ATOH7Q8N100 152 aa7.41□□□□□ -1.22
SNRPA1-204ENST00000558020 IGLV5-48A0A075B6I7 105 aa7.4□□□□□ -1.22
SNRPA1-204ENST00000558020 TRAV13-2A0A0B4J235 113 aa7.4□□□□□ -1.22
SNRPA1-204ENST00000558020 HSBP1L1C9JCN9 74 aa7.39□□□□□ -1.23
SNRPA1-204ENST00000558020 MUSTN1Q8IVN3 82 aa7.39□□□□□ -1.23
SNRPA1-204ENST00000558020 TCL1BO95988 128 aa7.38□□□□□ -1.23
SNRPA1-204ENST00000558020 VAMP3Q15836 100 aa7.38□□□□□ -1.23
SNRPA1-204ENST00000558020 ANKRD39Q53RE8 183 aa7.38□□□□□ -1.23
SNRPA1-204ENST00000558020 SMIM29Q86T20 159 aa7.38□□□□□ -1.23
SNRPA1-204ENST00000558020 C1orf195Q5TG92 126 aa7.37□□□□□ -1.23
SNRPA1-204ENST00000558020 SCGB1D1O95968 90 aa7.36□□□□□ -1.23
SNRPA1-204ENST00000558020 CFC1BP0CG36 223 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms