RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 LOC107984156A0A0G2JMH3 177 aa7.7□□□□□ -1.18
TMEM260-215ENST00000557626 ARL17AQ8IVW1 177 aa7.7□□□□□ -1.18
TMEM260-215ENST00000557626 LINC00518Q8N0U6 118 aa7.69□□□□□ -1.18
TMEM260-215ENST00000557626 C12orf57Q99622 126 aa7.69□□□□□ -1.18
TMEM260-215ENST00000557626 SLC25A34Q6PIV7 304 aa7.68□□□□□ -1.18
TMEM260-215ENST00000557626 PRO1933Q9H354 126 aa7.68□□□□□ -1.18
TMEM260-215ENST00000557626 LINC00587B1AMM8 73 aa7.67□□□□□ -1.18
TMEM260-215ENST00000557626 VPREB1P12018 145 aa7.67□□□□□ -1.18
TMEM260-215ENST00000557626 SCGB1D4Q6XE38 83 aa7.67□□□□□ -1.18
TMEM260-215ENST00000557626 KRTAP11-1Q8IUC1 163 aa7.67□□□□□ -1.18
TMEM260-215ENST00000557626 LINC00308Q8TCZ7 52 aa7.67□□□□□ -1.18
TMEM260-215ENST00000557626 SPANXDQ9BXN6 97 aa7.67□□□□□ -1.18
TMEM260-215ENST00000557626 SPANXCQ9NY87 97 aa7.67□□□□□ -1.18
TMEM260-215ENST00000557626 NPC2P61916 151 aa7.66□□□□□ -1.18
TMEM260-215ENST00000557626 S100A12P80511 92 aa7.66□□□□□ -1.18
TMEM260-215ENST00000557626 SPANXB1Q9NS25 103 aaPredicted RBP7.66□□□□□ -1.18
TMEM260-215ENST00000557626 HIGD1BQ9P298 99 aa7.65□□□□□ -1.18
TMEM260-215ENST00000557626 IGLV5-37A0A075B6J1 123 aa7.64□□□□□ -1.19
TMEM260-215ENST00000557626 PHF5AQ7RTV0 110 aaKnown RBP7.64□□□□□ -1.19
TMEM260-215ENST00000557626 FAM19A5Q7Z5A7 132 aaPredicted RBP7.64□□□□□ -1.19
TMEM260-215ENST00000557626 MUSTN1Q8IVN3 82 aa7.64□□□□□ -1.19
TMEM260-215ENST00000557626 TMEM238C9JI98 176 aa7.63□□□□□ -1.19
TMEM260-215ENST00000557626 MIEN1Q9BRT3 115 aa7.63□□□□□ -1.19
TMEM260-215ENST00000557626 PPDPFQ9H3Y8 114 aa7.63□□□□□ -1.19
TMEM260-215ENST00000557626 UQCR10Q9UDW1 63 aa7.63□□□□□ -1.19
TMEM260-215ENST00000557626 C22orf24Q9Y442 160 aa7.63□□□□□ -1.19
TMEM260-215ENST00000557626 SEC61BP60468 96 aaKnown RBP7.62□□□□□ -1.19
TMEM260-215ENST00000557626 IGKV2-28A0A075B6P5 120 aa7.61□□□□□ -1.19
TMEM260-215ENST00000557626 IGKV2D-28P01615 120 aa7.61□□□□□ -1.19
TMEM260-215ENST00000557626 KRTAP19-2Q3LHN2 52 aa7.61□□□□□ -1.19
TMEM260-215ENST00000557626 Q6ZVH6 145 aa7.61□□□□□ -1.19
TMEM260-215ENST00000557626 LINC00337Q8N6G1 96 aa7.61□□□□□ -1.19
TMEM260-215ENST00000557626 M0QXV9 152 aa7.6□□□□□ -1.19
TMEM260-215ENST00000557626 IFITM1P13164 125 aa7.6□□□□□ -1.19
TMEM260-215ENST00000557626 XP32Q5T750 250 aa7.6□□□□□ -1.19
TMEM260-215ENST00000557626 M0R2T5 61 aa7.59□□□□□ -1.19
TMEM260-215ENST00000557626 NDUFC2O95298 119 aa7.59□□□□□ -1.19
TMEM260-215ENST00000557626 TYMSOSQ8TAI1 123 aa7.59□□□□□ -1.19
TMEM260-215ENST00000557626 LINC00167Q96N53 147 aa7.59□□□□□ -1.19
TMEM260-215ENST00000557626 GAGE10A6NGK3 116 aa7.58□□□□□ -1.2
TMEM260-215ENST00000557626 NCR3O14931 201 aa7.58□□□□□ -1.2
TMEM260-215ENST00000557626 HIST1H4GQ99525 98 aa7.58□□□□□ -1.2
TMEM260-215ENST00000557626 A4D1N5 150 aa7.57□□□□□ -1.2
TMEM260-215ENST00000557626 RPL24P83731 157 aaKnown RBP7.57□□□□□ -1.2
TMEM260-215ENST00000557626 MRPL55Q7Z7F7 128 aaKnown RBP7.57□□□□□ -1.2
TMEM260-215ENST00000557626 RPL37AP8A6NKH3 93 aa7.56□□□□□ -1.2
TMEM260-215ENST00000557626 M0R378 163 aa7.56□□□□□ -1.2
TMEM260-215ENST00000557626 FXYD2P54710 66 aa7.56□□□□□ -1.2
TMEM260-215ENST00000557626 TAL2Q16559 108 aa7.56□□□□□ -1.2
TMEM260-215ENST00000557626 A0A087X002 238 aa7.55□□□□□ -1.2
TMEM260-215ENST00000557626 TRBV10-2A0A0K0K1G8 114 aa7.55□□□□□ -1.2
TMEM260-215ENST00000557626 CEND1Q8N111 149 aa7.55□□□□□ -1.2
TMEM260-215ENST00000557626 TRBV10-3A0A0K0K1G6 114 aa7.54□□□□□ -1.2
TMEM260-215ENST00000557626 IGLV6-57P01721 117 aa7.54□□□□□ -1.2
TMEM260-215ENST00000557626 CTAG1AP78358 180 aa7.54□□□□□ -1.2
TMEM260-215ENST00000557626 HSD52Q0P140 79 aa7.54□□□□□ -1.2
TMEM260-215ENST00000557626 NKAPP1Q8N9T2 125 aa7.54□□□□□ -1.2
TMEM260-215ENST00000557626 TSTD3H0UI37 97 aa7.52□□□□□ -1.21
TMEM260-215ENST00000557626 CFC1P0CG37 223 aa7.52□□□□□ -1.21
TMEM260-215ENST00000557626 LBHQ53QV2 105 aaPredicted RBP7.52□□□□□ -1.21
TMEM260-215ENST00000557626 DDTP30046 118 aa7.51□□□□□ -1.21
TMEM260-215ENST00000557626 BVES-AS1Q5T3Y7 98 aa7.51□□□□□ -1.21
TMEM260-215ENST00000557626 KCNQ1DNQ9H478 68 aa7.51□□□□□ -1.21
TMEM260-215ENST00000557626 KRTAP4-16G5E9R7 235 aaPredicted RBP7.5□□□□□ -1.21
TMEM260-215ENST00000557626 SPRR1AP35321 89 aa7.5□□□□□ -1.21
TMEM260-215ENST00000557626 KRTAP19-1Q8IUB9 90 aa7.5□□□□□ -1.21
TMEM260-215ENST00000557626 LINC00304Q8N9R0 145 aa7.5□□□□□ -1.21
TMEM260-215ENST00000557626 COPS9Q8WXC6 57 aa7.5□□□□□ -1.21
TMEM260-215ENST00000557626 A0A1B0GWB2 263 aa7.49□□□□□ -1.21
TMEM260-215ENST00000557626 UBE2BP63146 152 aa7.49□□□□□ -1.21
TMEM260-215ENST00000557626 FLGP20930 4061 aaPredicted RBP7.48□□□□□ -1.21
TMEM260-215ENST00000557626 HINT1P49773 126 aaPredicted RBP7.48□□□□□ -1.21
TMEM260-215ENST00000557626 KRTAP13-3Q3SY46 172 aa7.48□□□□□ -1.21
TMEM260-215ENST00000557626 TMEM126AQ9H061 195 aa7.48□□□□□ -1.21
TMEM260-215ENST00000557626 A0A0B4J2C4 111 aa7.47□□□□□ -1.21
TMEM260-215ENST00000557626 A6NJY4 79 aa7.47□□□□□ -1.21
TMEM260-215ENST00000557626 K7ERJ3 54 aa7.47□□□□□ -1.21
TMEM260-215ENST00000557626 KRTAP13-1Q8IUC0 172 aa7.47□□□□□ -1.21
TMEM260-215ENST00000557626 A6NDN8 102 aa7.46□□□□□ -1.22
TMEM260-215ENST00000557626 PRYO14603 147 aa7.46□□□□□ -1.22
TMEM260-215ENST00000557626 S100A7L2Q5SY68 101 aa7.46□□□□□ -1.22
TMEM260-215ENST00000557626 OR13C6PQ8NH95 151 aa7.46□□□□□ -1.22
TMEM260-215ENST00000557626 TRAV13-2A0A0B4J235 113 aa7.45□□□□□ -1.22
TMEM260-215ENST00000557626 SMIM11BQ8TCY0 68 aa7.45□□□□□ -1.22
TMEM260-215ENST00000557626 NHP2Q9NX24 153 aaKnown RBP7.45□□□□□ -1.22
TMEM260-215ENST00000557626 TRAV23DV6A0A075B6W5 121 aa7.44□□□□□ -1.22
TMEM260-215ENST00000557626 ZNF861PO60384 105 aa7.44□□□□□ -1.22
TMEM260-215ENST00000557626 BCE1O60756 84 aa7.44□□□□□ -1.22
TMEM260-215ENST00000557626 FP248Q71RG6 208 aaPredicted RBP7.44□□□□□ -1.22
TMEM260-215ENST00000557626 ZNF73O43830 326 aaPredicted RBP7.43□□□□□ -1.22
TMEM260-215ENST00000557626 KRTAP6-3Q3LI67 103 aa7.43□□□□□ -1.22
TMEM260-215ENST00000557626 PRO1854Q9UHT4 67 aa7.43□□□□□ -1.22
TMEM260-215ENST00000557626 TMEM238LA0A1B0GVL6 79 aa7.42□□□□□ -1.22
TMEM260-215ENST00000557626 B5MCH6 92 aa7.42□□□□□ -1.22
TMEM260-215ENST00000557626 PRLHP81277 87 aa7.42□□□□□ -1.22
TMEM260-215ENST00000557626 C6orf99Q4VX62 202 aa7.42□□□□□ -1.22
TMEM260-215ENST00000557626 NEBP20929 6669 aa7.41□□□□□ -1.22
TMEM260-215ENST00000557626 PCP4L1A6NKN8 68 aa7.41□□□□□ -1.22
TMEM260-215ENST00000557626 M0R143 59 aa7.41□□□□□ -1.22
TMEM260-215ENST00000557626 KRTAP13-2Q52LG2 175 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms