RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 RPL13AP40429 203 aaKnown RBP7.49□□□□□ -1.21
SLIRP-211ENST00000557623 SNRPEP62304 92 aaKnown RBP7.49□□□□□ -1.21
SLIRP-211ENST00000557623 PRR26Q8N8Z3 221 aa7.49□□□□□ -1.21
SLIRP-211ENST00000557623 KCNQ1DNQ9H478 68 aa7.49□□□□□ -1.21
SLIRP-211ENST00000557623 SPANXB1Q9NS25 103 aaPredicted RBP7.49□□□□□ -1.21
SLIRP-211ENST00000557623 PRLHP81277 87 aa7.48□□□□□ -1.21
SLIRP-211ENST00000557623 ADAMTSL4-AS1Q5T5F5 129 aa7.48□□□□□ -1.21
SLIRP-211ENST00000557623 ATOH7Q8N100 152 aa7.48□□□□□ -1.21
SLIRP-211ENST00000557623 TRBV10-3A0A0K0K1G6 114 aa7.47□□□□□ -1.21
SLIRP-211ENST00000557623 NPC2P61916 151 aa7.47□□□□□ -1.21
SLIRP-211ENST00000557623 LINC00337Q8N6G1 96 aa7.47□□□□□ -1.21
SLIRP-211ENST00000557623 DDTP30046 118 aa7.46□□□□□ -1.22
SLIRP-211ENST00000557623 S100A7L2Q5SY68 101 aa7.46□□□□□ -1.22
SLIRP-211ENST00000557623 SOSTDC1Q6X4U4 206 aa7.46□□□□□ -1.22
SLIRP-211ENST00000557623 SCGB1D4Q6XE38 83 aa7.46□□□□□ -1.22
SLIRP-211ENST00000557623 LITAFQ99732 161 aa7.46□□□□□ -1.22
SLIRP-211ENST00000557623 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
SLIRP-211ENST00000557623 KRTAP3-1Q9BYR8 98 aa7.46□□□□□ -1.22
SLIRP-211ENST00000557623 TTTY13Q9BZ97 58 aa7.46□□□□□ -1.22
SLIRP-211ENST00000557623 TMA7Q9Y2S6 64 aaKnown RBP7.46□□□□□ -1.22
SLIRP-211ENST00000557623 TNXBP22105 4242 aa7.45□□□□□ -1.22
SLIRP-211ENST00000557623 ETDCA0A1B0GVM5 59 aa7.45□□□□□ -1.22
SLIRP-211ENST00000557623 SPRR1AP35321 89 aa7.45□□□□□ -1.22
SLIRP-211ENST00000557623 LINC00308Q8TCZ7 52 aa7.45□□□□□ -1.22
SLIRP-211ENST00000557623 HSBP1L1C9JCN9 74 aa7.44□□□□□ -1.22
SLIRP-211ENST00000557623 CRYGAP11844 174 aa7.44□□□□□ -1.22
SLIRP-211ENST00000557623 COPS9Q8WXC6 57 aa7.44□□□□□ -1.22
SLIRP-211ENST00000557623 SPANXCQ9NY87 97 aa7.44□□□□□ -1.22
SLIRP-211ENST00000557623 CBY1Q9Y3M2 126 aa7.44□□□□□ -1.22
SLIRP-211ENST00000557623 C5orf52A6NGY3 159 aa7.43□□□□□ -1.22
SLIRP-211ENST00000557623 IGLV6-57P01721 117 aa7.43□□□□□ -1.22
SLIRP-211ENST00000557623 HIGD2AQ9BW72 106 aa7.43□□□□□ -1.22
SLIRP-211ENST00000557623 SPANXDQ9BXN6 97 aa7.43□□□□□ -1.22
SLIRP-211ENST00000557623 KRTAP4-16G5E9R7 235 aaPredicted RBP7.42□□□□□ -1.22
SLIRP-211ENST00000557623 FAM229BQ4G0N7 80 aa7.42□□□□□ -1.22
SLIRP-211ENST00000557623 LCE5AQ5TCM9 118 aa7.42□□□□□ -1.22
SLIRP-211ENST00000557623 Q6ZVH6 145 aa7.41□□□□□ -1.22
SLIRP-211ENST00000557623 PCP2Q8IVA1 136 aa7.41□□□□□ -1.22
SLIRP-211ENST00000557623 ZNF706Q9Y5V0 76 aaPredicted RBP7.41□□□□□ -1.22
SLIRP-211ENST00000557623 TRAV23DV6A0A075B6W5 121 aa7.4□□□□□ -1.22
SLIRP-211ENST00000557623 A0A087X002 238 aa7.4□□□□□ -1.22
SLIRP-211ENST00000557623 SCGB1D1O95968 90 aa7.4□□□□□ -1.22
SLIRP-211ENST00000557623 IFITM1P13164 125 aa7.4□□□□□ -1.22
SLIRP-211ENST00000557623 LINC00518Q8N0U6 118 aa7.4□□□□□ -1.22
SLIRP-211ENST00000557623 TYMSOSQ8TAI1 123 aa7.4□□□□□ -1.22
SLIRP-211ENST00000557623 PPDPFQ9H3Y8 114 aa7.4□□□□□ -1.22
SLIRP-211ENST00000557623 B5MCH6 92 aa7.39□□□□□ -1.23
SLIRP-211ENST00000557623 OR13C6PQ8NH95 151 aa7.39□□□□□ -1.23
SLIRP-211ENST00000557623 HINT1P49773 126 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-211ENST00000557623 JOSD1Q15040 202 aaPredicted RBP7.38□□□□□ -1.23
SLIRP-211ENST00000557623 SMCR5Q8TEV8 140 aa7.38□□□□□ -1.23
SLIRP-211ENST00000557623 ANAPC11Q9NYG5 84 aa7.38□□□□□ -1.23
SLIRP-211ENST00000557623 ZNF73O43830 326 aaPredicted RBP7.37□□□□□ -1.23
SLIRP-211ENST00000557623 Q6ZRX8 168 aa7.37□□□□□ -1.23
SLIRP-211ENST00000557623 SPRR4Q96PI1 79 aa7.37□□□□□ -1.23
SLIRP-211ENST00000557623 KRTAP13-2Q52LG2 175 aa7.35□□□□□ -1.23
SLIRP-211ENST00000557623 MUSTN1Q8IVN3 82 aa7.35□□□□□ -1.23
SLIRP-211ENST00000557623 Q9BRP9 147 aa7.33□□□□□ -1.24
SLIRP-211ENST00000557623 A6NDN8 102 aa7.31□□□□□ -1.24
SLIRP-211ENST00000557623 ERC2-IT1O76042 136 aa7.31□□□□□ -1.24
SLIRP-211ENST00000557623 LINC00483Q53H64 154 aa7.31□□□□□ -1.24
SLIRP-211ENST00000557623 LINC00304Q8N9R0 145 aa7.31□□□□□ -1.24
SLIRP-211ENST00000557623 TRAV13-2A0A0B4J235 113 aa7.3□□□□□ -1.24
SLIRP-211ENST00000557623 COX8AP10176 69 aa7.3□□□□□ -1.24
SLIRP-211ENST00000557623 CTAG1AP78358 180 aa7.3□□□□□ -1.24
SLIRP-211ENST00000557623 GAGE2AQ6NT46 116 aa7.3□□□□□ -1.24
SLIRP-211ENST00000557623 KRTAP4-11Q9BYQ6 195 aa7.3□□□□□ -1.24
SLIRP-211ENST00000557623 DLEU1O43261 78 aa7.29□□□□□ -1.24
SLIRP-211ENST00000557623 TSPAN13O95857 204 aa7.29□□□□□ -1.24
SLIRP-211ENST00000557623 COX7BP24311 80 aa7.29□□□□□ -1.24
SLIRP-211ENST00000557623 C6orf99Q4VX62 202 aa7.29□□□□□ -1.24
SLIRP-211ENST00000557623 C3orf22Q8N5N4 141 aa7.29□□□□□ -1.24
SLIRP-211ENST00000557623 DHRS4-AS1Q9P1J3 65 aa7.29□□□□□ -1.24
SLIRP-211ENST00000557623 HMCN2Q8NDA2 5059 aa7.28□□□□□ -1.24
SLIRP-211ENST00000557623 TRBV7-6A0A0J9YX20 115 aa7.28□□□□□ -1.24
SLIRP-211ENST00000557623 ELOF1P60002 83 aaKnown RBP7.28□□□□□ -1.24
SLIRP-211ENST00000557623 VAMP8Q9BV40 100 aa7.28□□□□□ -1.24
SLIRP-211ENST00000557623 SPATA45Q537H7 98 aa7.27□□□□□ -1.25
SLIRP-211ENST00000557623 SPAG11AQ6PDA7 123 aa7.27□□□□□ -1.25
SLIRP-211ENST00000557623 KRTAP4-2Q9BYR5 136 aa7.27□□□□□ -1.25
SLIRP-211ENST00000557623 PAM16Q9Y3D7 125 aa7.27□□□□□ -1.25
SLIRP-211ENST00000557623 A0A1B0GWB2 263 aa7.26□□□□□ -1.25
SLIRP-211ENST00000557623 HIST1H4GQ99525 98 aa7.26□□□□□ -1.25
SLIRP-211ENST00000557623 A4D1N5 150 aa7.25□□□□□ -1.25
SLIRP-211ENST00000557623 PRR4Q16378 134 aa7.25□□□□□ -1.25
SLIRP-211ENST00000557623 C14orf144Q96I85 54 aa7.25□□□□□ -1.25
SLIRP-211ENST00000557623 KRTAP23-1A1A580 65 aa7.24□□□□□ -1.25
SLIRP-211ENST00000557623 SLC25A34Q6PIV7 304 aa7.24□□□□□ -1.25
SLIRP-211ENST00000557623 SSBP3-AS1Q7Z2R9 100 aa7.24□□□□□ -1.25
SLIRP-211ENST00000557623 ST20-AS1Q8NBB2 130 aa7.24□□□□□ -1.25
SLIRP-211ENST00000557623 Q8NBF4 154 aa7.24□□□□□ -1.25
SLIRP-211ENST00000557623 IGLV9-49A0A0B4J1Y8 123 aa7.23□□□□□ -1.25
SLIRP-211ENST00000557623 SMIM11BQ8TCY0 68 aa7.23□□□□□ -1.25
SLIRP-211ENST00000557623 HIGD1BQ9P298 99 aa7.23□□□□□ -1.25
SLIRP-211ENST00000557623 SPRR1BP22528 89 aa7.22□□□□□ -1.25
SLIRP-211ENST00000557623 MOBPQ13875 183 aa7.22□□□□□ -1.25
SLIRP-211ENST00000557623 VAMP3Q15836 100 aa7.22□□□□□ -1.25
SLIRP-211ENST00000557623 NHP2Q9NX24 153 aaKnown RBP7.22□□□□□ -1.25
SLIRP-211ENST00000557623 SPINK1P00995 79 aa7.2□□□□□ -1.26
SLIRP-211ENST00000557623 TAL2Q16559 108 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms